RNA–Protein interactions for RNA: ENST00000485249.1

KDM4A-205, Transcript of lysine demethylase 4A, humanhuman

TSL 3

Gene KDM4A, Length 852 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-205ENST00000485249 PNMA3Q9UL41 463 aa8.53□□□□□ -1.04
KDM4A-205ENST00000485249 DIP2AQ14689 1571 aa8.52□□□□□ -1.04
KDM4A-205ENST00000485249 USP47Q96K76 1375 aa8.52□□□□□ -1.05
KDM4A-205ENST00000485249 C11orf95C9JLR9 678 aaPredicted RBP8.52□□□□□ -1.05
KDM4A-205ENST00000485249 PSEN2P49810 448 aa8.52□□□□□ -1.05
KDM4A-205ENST00000485249 POTEEQ6S8J3 1075 aa8.52□□□□□ -1.05
KDM4A-205ENST00000485249 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.52□□□□□ -1.05
KDM4A-205ENST00000485249 MARVELD3Q96A59 401 aa8.52□□□□□ -1.05
KDM4A-205ENST00000485249 BEGAINQ9BUH8 593 aa8.52□□□□□ -1.05
KDM4A-205ENST00000485249 NPHP4O75161 1426 aaPredicted RBP8.52□□□□□ -1.05
KDM4A-205ENST00000485249 CPS1P31327 1500 aa8.51□□□□□ -1.05
KDM4A-205ENST00000485249 SH3D19Q5HYK7 790 aa8.51□□□□□ -1.05
KDM4A-205ENST00000485249 SLC26A8Q96RN1 970 aa8.51□□□□□ -1.05
KDM4A-205ENST00000485249 CARD11Q9BXL7 1154 aa8.51□□□□□ -1.05
KDM4A-205ENST00000485249 SLC4A5Q9BY07 1137 aa8.51□□□□□ -1.05
KDM4A-205ENST00000485249 TMEM134Q9H6X4 195 aa8.51□□□□□ -1.05
KDM4A-205ENST00000485249 YTHDC2Q9H6S0 1430 aaKnown RBP8.51□□□□□ -1.05
KDM4A-205ENST00000485249 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.51□□□□□ -1.05
KDM4A-205ENST00000485249 DLC1Q96QB1 1528 aa8.5□□□□□ -1.05
KDM4A-205ENST00000485249 NWD1Q149M9 1564 aa8.5□□□□□ -1.05
KDM4A-205ENST00000485249 ZNF687Q8N1G0 1237 aa8.5□□□□□ -1.05
KDM4A-205ENST00000485249 XIRP1Q702N8 1843 aaKnown RBP8.5□□□□□ -1.05
KDM4A-205ENST00000485249 LRPPRCP42704 1394 aaKnown RBP8.49□□□□□ -1.05
KDM4A-205ENST00000485249 PLEKHH1Q9ULM0 1364 aa8.49□□□□□ -1.05
KDM4A-205ENST00000485249 TECPR2O15040 1411 aa8.49□□□□□ -1.05
KDM4A-205ENST00000485249 ANKLE2Q86XL3 938 aa8.49□□□□□ -1.05
KDM4A-205ENST00000485249 TESK2Q96S53 571 aa8.49□□□□□ -1.05
KDM4A-205ENST00000485249 RSPH6AQ9H0K4 717 aa8.49□□□□□ -1.05
KDM4A-205ENST00000485249 KIAA1468Q9P260 1216 aa8.49□□□□□ -1.05
KDM4A-205ENST00000485249 RABGEF1Q9UJ41 708 aa8.49□□□□□ -1.05
KDM4A-205ENST00000485249 TBX22Q9Y458 520 aa8.49□□□□□ -1.05
KDM4A-205ENST00000485249 EID1Q9Y6B2 187 aa8.49□□□□□ -1.05
KDM4A-205ENST00000485249 MYOM1P52179 1685 aa8.49□□□□□ -1.05
KDM4A-205ENST00000485249 ST20-MTHFSA0A0A6YYL1 179 aa8.48□□□□□ -1.05
KDM4A-205ENST00000485249 FAM205CA6NFA0 338 aa8.48□□□□□ -1.05
KDM4A-205ENST00000485249 SMAPO00193 183 aa8.48□□□□□ -1.05
KDM4A-205ENST00000485249 EIF4G2P78344 907 aaKnown RBP eCLIP8.48□□□□□ -1.05
KDM4A-205ENST00000485249 C14orf37Q86TY3 774 aa8.48□□□□□ -1.05
KDM4A-205ENST00000485249 SULF1Q8IWU6 871 aa8.48□□□□□ -1.05
KDM4A-205ENST00000485249 TRAK1Q9UPV9 953 aa8.48□□□□□ -1.05
KDM4A-205ENST00000485249 TULP4Q9NRJ4 1543 aa8.48□□□□□ -1.05
KDM4A-205ENST00000485249 ABCC11Q96J66 1382 aa8.48□□□□□ -1.05
KDM4A-205ENST00000485249 ROBO2Q9HCK4 1378 aa8.48□□□□□ -1.05
KDM4A-205ENST00000485249 NALCNQ8IZF0 1738 aa8.47□□□□□ -1.05
KDM4A-205ENST00000485249 HDGFP51858 240 aaKnown RBP8.47□□□□□ -1.05
KDM4A-205ENST00000485249 DMRTA1Q5VZB9 504 aa8.47□□□□□ -1.05
KDM4A-205ENST00000485249 PCMTD1Q96MG8 357 aaPredicted RBP8.47□□□□□ -1.05
KDM4A-205ENST00000485249 AXIN2Q9Y2T1 843 aa8.47□□□□□ -1.05
KDM4A-205ENST00000485249 DISP3Q9P2K9 1392 aa8.47□□□□□ -1.05
KDM4A-205ENST00000485249 CD46P15529 392 aa8.46□□□□□ -1.06
KDM4A-205ENST00000485249 STK26Q9P289 416 aa8.46□□□□□ -1.06
KDM4A-205ENST00000485249 DIXDC1Q155Q3 683 aa8.45□□□□□ -1.06
KDM4A-205ENST00000485249 WAPLQ7Z5K2 1190 aa8.45□□□□□ -1.06
KDM4A-205ENST00000485249 FAM163AQ96GL9 167 aaPredicted RBP8.45□□□□□ -1.06
KDM4A-205ENST00000485249 HS3ST6Q96QI5 342 aa8.45□□□□□ -1.06
KDM4A-205ENST00000485249 VPS9D1Q9Y2B5 631 aa8.45□□□□□ -1.06
KDM4A-205ENST00000485249 WASHC2AQ641Q2 1341 aa8.45□□□□□ -1.06
KDM4A-205ENST00000485249 PIK3R4Q99570 1358 aa8.45□□□□□ -1.06
KDM4A-205ENST00000485249 RGPD8O14715 1765 aaPredicted RBP8.45□□□□□ -1.06
KDM4A-205ENST00000485249 ADGRB2O60241 1585 aa8.44□□□□□ -1.06
KDM4A-205ENST00000485249 USP32Q8NFA0 1604 aa8.44□□□□□ -1.06
KDM4A-205ENST00000485249 DDX11L8A8MPP1 907 aa8.44□□□□□ -1.06
KDM4A-205ENST00000485249 KCNA6P17658 529 aa8.44□□□□□ -1.06
KDM4A-205ENST00000485249 SKIV2LQ15477 1246 aaKnown RBP8.44□□□□□ -1.06
KDM4A-205ENST00000485249 LCE2DQ5TA82 110 aaPredicted RBP8.44□□□□□ -1.06
KDM4A-205ENST00000485249 MYSM1Q5VVJ2 828 aa8.44□□□□□ -1.06
KDM4A-205ENST00000485249 AMOTL2Q9Y2J4 779 aa8.44□□□□□ -1.06
KDM4A-205ENST00000485249 KIF7Q2M1P5 1343 aa8.44□□□□□ -1.06
KDM4A-205ENST00000485249 CENPJQ9HC77 1338 aaPredicted RBP8.44□□□□□ -1.06
KDM4A-205ENST00000485249 CCDC7Q96M83 1385 aa8.44□□□□□ -1.06
KDM4A-205ENST00000485249 SBNO2Q9Y2G9 1366 aa8.44□□□□□ -1.06
KDM4A-205ENST00000485249 PTCH1Q13635 1447 aa8.44□□□□□ -1.06
KDM4A-205ENST00000485249 FAM135BQ49AJ0 1406 aa8.44□□□□□ -1.06
KDM4A-205ENST00000485249 POTEB3A0JP26 581 aa8.43□□□□□ -1.06
KDM4A-205ENST00000485249 FAM98CQ17RN3 349 aaKnown RBP8.43□□□□□ -1.06
KDM4A-205ENST00000485249 POTEBQ6S5H4 581 aa8.43□□□□□ -1.06
KDM4A-205ENST00000485249 PRAM1Q96QH2 718 aa8.43□□□□□ -1.06
KDM4A-205ENST00000485249 TBC1D2Q9BYX2 928 aa8.43□□□□□ -1.06
KDM4A-205ENST00000485249 SEPT9Q9UHD8 586 aaPredicted RBP8.43□□□□□ -1.06
KDM4A-205ENST00000485249 TK2O00142 265 aa8.42□□□□□ -1.06
KDM4A-205ENST00000485249 SAFB2Q14151 953 aaKnown RBP eCLIP8.42□□□□□ -1.06
KDM4A-205ENST00000485249 SIRT1Q96EB6 747 aa8.42□□□□□ -1.06
KDM4A-205ENST00000485249 NBPF3Q9H094 633 aa8.42□□□□□ -1.06
KDM4A-205ENST00000485249 TOPAZ1Q8N9V7 1692 aa8.42□□□□□ -1.06
KDM4A-205ENST00000485249 FMN2Q9NZ56 1722 aa8.42□□□□□ -1.06
KDM4A-205ENST00000485249 EIF3AQ14152 1382 aaKnown RBP8.41□□□□□ -1.06
KDM4A-205ENST00000485249 CLK2P49760 499 aaKnown RBP8.41□□□□□ -1.06
KDM4A-205ENST00000485249 LAPTM4BQ86VI4 370 aa8.41□□□□□ -1.06
KDM4A-205ENST00000485249 LTBP4Q8N2S1 1624 aa8.4□□□□□ -1.06
KDM4A-205ENST00000485249 NKTRP30414 1462 aaKnown RBP8.4□□□□□ -1.06
KDM4A-205ENST00000485249 ZNF335Q9H4Z2 1342 aaPredicted RBP8.4□□□□□ -1.06
KDM4A-205ENST00000485249 SWT1Q5T5J6 900 aaKnown RBP8.4□□□□□ -1.06
KDM4A-205ENST00000485249 SPIRE2Q8WWL2 714 aa8.4□□□□□ -1.06
KDM4A-205ENST00000485249 LRRC7Q96NW7 1537 aa8.39□□□□□ -1.07
KDM4A-205ENST00000485249 BHMG1C9JSJ3 638 aaPredicted RBP8.39□□□□□ -1.07
KDM4A-205ENST00000485249 LSM11P83369 360 aaKnown RBP eCLIP8.39□□□□□ -1.07
KDM4A-205ENST00000485249 RDH13Q8NBN7 331 aa8.39□□□□□ -1.07
KDM4A-205ENST00000485249 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.39□□□□□ -1.07
KDM4A-205ENST00000485249 POLR3EQ9NVU0 708 aa8.39□□□□□ -1.07
KDM4A-205ENST00000485249 AKAP12Q02952 1782 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms