RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 GCP02774 474 aa9.38□□□□□ -0.91
CAPN13-206ENST00000485248 HMGB2P26583 209 aaKnown RBP9.38□□□□□ -0.91
CAPN13-206ENST00000485248 CFAP44Q96MT7 982 aa9.38□□□□□ -0.91
CAPN13-206ENST00000485248 PRDM10Q9NQV6 1147 aa9.38□□□□□ -0.91
CAPN13-206ENST00000485248 KIAA1210Q9ULL0 1709 aa9.38□□□□□ -0.91
CAPN13-206ENST00000485248 KAT6BQ8WYB5 2073 aa9.38□□□□□ -0.91
CAPN13-206ENST00000485248 LRRC4BQ9NT99 713 aa9.37□□□□□ -0.91
CAPN13-206ENST00000485248 CCDC7Q96M83 1385 aa9.37□□□□□ -0.91
CAPN13-206ENST00000485248 PRR36Q9H6K5 1346 aa9.36□□□□□ -0.91
CAPN13-206ENST00000485248 TNRC6CQ9HCJ0 1690 aaKnown RBP9.36□□□□□ -0.91
CAPN13-206ENST00000485248 CICQ96RK0 1608 aaPredicted RBP9.36□□□□□ -0.91
CAPN13-206ENST00000485248 CCDC85CA6NKD9 419 aa9.36□□□□□ -0.91
CAPN13-206ENST00000485248 CTCFP49711 727 aaPredicted RBP9.36□□□□□ -0.91
CAPN13-206ENST00000485248 ABCC6O95255 1503 aa9.36□□□□□ -0.91
CAPN13-206ENST00000485248 ECM2O94769 699 aaPredicted RBP9.35□□□□□ -0.91
CAPN13-206ENST00000485248 FLAD1Q8NFF5 587 aa9.35□□□□□ -0.91
CAPN13-206ENST00000485248 SYTL4Q96C24 671 aaPredicted RBP9.35□□□□□ -0.91
CAPN13-206ENST00000485248 ABHD8Q96I13 439 aa9.35□□□□□ -0.91
CAPN13-206ENST00000485248 ARHGAP27Q6ZUM4 889 aa9.34□□□□□ -0.91
CAPN13-206ENST00000485248 CARD10Q9BWT7 1032 aa9.34□□□□□ -0.91
CAPN13-206ENST00000485248 BCS1LQ9Y276 419 aa9.34□□□□□ -0.91
CAPN13-206ENST00000485248 PPIP5K1Q6PFW1 1433 aa9.33□□□□□ -0.92
CAPN13-206ENST00000485248 COL23A1Q86Y22 540 aaPredicted RBP9.33□□□□□ -0.92
CAPN13-206ENST00000485248 NUDT16Q96DE0 195 aaKnown RBP9.33□□□□□ -0.92
CAPN13-206ENST00000485248 C14orf93Q9H972 538 aaKnown RBP9.33□□□□□ -0.92
CAPN13-206ENST00000485248 RRAGCQ9HB90 399 aa9.33□□□□□ -0.92
CAPN13-206ENST00000485248 CCNL1Q9UK58 526 aaPredicted RBP9.33□□□□□ -0.92
CAPN13-206ENST00000485248 TRAK1Q9UPV9 953 aa9.33□□□□□ -0.92
CAPN13-206ENST00000485248 ACEP12821 1306 aa9.32□□□□□ -0.92
CAPN13-206ENST00000485248 C10orf71Q711Q0 1435 aa9.32□□□□□ -0.92
CAPN13-206ENST00000485248 KCPQ6ZWJ8 1503 aa9.32□□□□□ -0.92
CAPN13-206ENST00000485248 FOXN1O15353 648 aa9.32□□□□□ -0.92
CAPN13-206ENST00000485248 CFAP70Q5T0N1 1121 aa9.32□□□□□ -0.92
CAPN13-206ENST00000485248 PKD1L3Q7Z443 1732 aa9.31□□□□□ -0.92
CAPN13-206ENST00000485248 NLRP6P59044 892 aa9.31□□□□□ -0.92
CAPN13-206ENST00000485248 SPOCK2Q92563 424 aa9.31□□□□□ -0.92
CAPN13-206ENST00000485248 PCGF6Q9BYE7 350 aa9.31□□□□□ -0.92
CAPN13-206ENST00000485248 POLR3AO14802 1390 aaPredicted RBP9.3□□□□□ -0.92
CAPN13-206ENST00000485248 KCNQ4P56696 695 aa9.3□□□□□ -0.92
CAPN13-206ENST00000485248 C9orf131Q5VYM1 1079 aa9.3□□□□□ -0.92
CAPN13-206ENST00000485248 MKRN1Q9UHC7 482 aaKnown RBP9.3□□□□□ -0.92
CAPN13-206ENST00000485248 PXDNLA1KZ92 1463 aa9.29□□□□□ -0.92
CAPN13-206ENST00000485248 IL2RBP14784 551 aa9.29□□□□□ -0.92
CAPN13-206ENST00000485248 TSHZ2Q9NRE2 1034 aa9.29□□□□□ -0.92
CAPN13-206ENST00000485248 PCNTO95613 3336 aa9.29□□□□□ -0.92
CAPN13-206ENST00000485248 CPSF1Q10570 1443 aaKnown RBP9.29□□□□□ -0.92
CAPN13-206ENST00000485248 USP47Q96K76 1375 aa9.28□□□□□ -0.92
CAPN13-206ENST00000485248 FCHSD2O94868 740 aa9.28□□□□□ -0.92
CAPN13-206ENST00000485248 ZEB1P37275 1124 aaPredicted RBP9.28□□□□□ -0.92
CAPN13-206ENST00000485248 LBX1P52954 281 aa9.28□□□□□ -0.92
CAPN13-206ENST00000485248 RNF181Q9P0P0 153 aa9.28□□□□□ -0.92
CAPN13-206ENST00000485248 CCDC61Q9Y6R9 512 aa9.28□□□□□ -0.92
CAPN13-206ENST00000485248 NSD3Q9BZ95 1437 aa9.28□□□□□ -0.92
CAPN13-206ENST00000485248 LY75O60449 1722 aa9.28□□□□□ -0.92
CAPN13-206ENST00000485248 RGPD5Q99666 1765 aa9.27□□□□□ -0.92
CAPN13-206ENST00000485248 C5P01031 1676 aa9.27□□□□□ -0.93
CAPN13-206ENST00000485248 SOX12O15370 315 aa9.27□□□□□ -0.93
CAPN13-206ENST00000485248 RGS19P49795 217 aa9.27□□□□□ -0.93
CAPN13-206ENST00000485248 KCNH5Q8NCM2 988 aa9.27□□□□□ -0.93
CAPN13-206ENST00000485248 NLRP2Q9NX02 1062 aa9.27□□□□□ -0.93
CAPN13-206ENST00000485248 SPATA31E1Q6ZUB1 1445 aa9.27□□□□□ -0.93
CAPN13-206ENST00000485248 SLIT3O75094 1523 aa9.26□□□□□ -0.93
CAPN13-206ENST00000485248 TRIM26Q12899 539 aaPredicted RBP9.26□□□□□ -0.93
CAPN13-206ENST00000485248 SPRYD3Q8NCJ5 442 aa9.26□□□□□ -0.93
CAPN13-206ENST00000485248 DDX54Q8TDD1 881 aaKnown RBP9.26□□□□□ -0.93
CAPN13-206ENST00000485248 AK7Q96M32 723 aa9.26□□□□□ -0.93
CAPN13-206ENST00000485248 CREBZFQ9NS37 354 aa9.26□□□□□ -0.93
CAPN13-206ENST00000485248 COL18A1P39060 1754 aa9.26□□□□□ -0.93
CAPN13-206ENST00000485248 QRICH2Q9H0J4 1663 aa9.26□□□□□ -0.93
CAPN13-206ENST00000485248 VEGFAP15692 232 aaPredicted RBP9.25□□□□□ -0.93
CAPN13-206ENST00000485248 TGFB2P61812 414 aa9.25□□□□□ -0.93
CAPN13-206ENST00000485248 BEGAINQ9BUH8 593 aa9.25□□□□□ -0.93
CAPN13-206ENST00000485248 CDK19Q9BWU1 502 aa9.25□□□□□ -0.93
CAPN13-206ENST00000485248 AXIN2Q9Y2T1 843 aa9.25□□□□□ -0.93
CAPN13-206ENST00000485248 DOT1LQ8TEK3 1739 aa9.25□□□□□ -0.93
CAPN13-206ENST00000485248 RGL2O15211 777 aa9.24□□□□□ -0.93
CAPN13-206ENST00000485248 PHF14O94880 888 aa9.24□□□□□ -0.93
CAPN13-206ENST00000485248 N4BP2Q86UW6 1770 aaPredicted RBP9.24□□□□□ -0.93
CAPN13-206ENST00000485248 ANKRD36BQ8N2N9 1353 aa9.24□□□□□ -0.93
CAPN13-206ENST00000485248 PLEKHG3A1L390 1219 aa9.23□□□□□ -0.93
CAPN13-206ENST00000485248 PRIM1P49642 420 aaKnown RBP9.23□□□□□ -0.93
CAPN13-206ENST00000485248 USP54Q70EL1 1684 aa9.23□□□□□ -0.93
CAPN13-206ENST00000485248 SRPK2P78362 688 aaKnown RBP9.22□□□□□ -0.93
CAPN13-206ENST00000485248 ZC3H4Q9UPT8 1303 aaKnown RBP9.22□□□□□ -0.93
CAPN13-206ENST00000485248 CNTNAP1P78357 1384 aa9.22□□□□□ -0.93
CAPN13-206ENST00000485248 MAP2K1Q02750 393 aaPredicted RBP9.21□□□□□ -0.94
CAPN13-206ENST00000485248 ARHGEF25Q86VW2 580 aa9.21□□□□□ -0.94
CAPN13-206ENST00000485248 CCDC87Q9NVE4 849 aa9.21□□□□□ -0.94
CAPN13-206ENST00000485248 TIMELESSQ9UNS1 1208 aa9.21□□□□□ -0.94
CAPN13-206ENST00000485248 ADGRB1O14514 1584 aa9.2□□□□□ -0.94
CAPN13-206ENST00000485248 ARFGEF1Q9Y6D6 1849 aa9.2□□□□□ -0.94
CAPN13-206ENST00000485248 A0A0G2JLW4 131 aa9.2□□□□□ -0.94
CAPN13-206ENST00000485248 PRPF38BQ5VTL8 546 aaKnown RBP9.2□□□□□ -0.94
CAPN13-206ENST00000485248 HSPA8P11142 646 aaKnown RBP9.19□□□□□ -0.94
CAPN13-206ENST00000485248 POLA2Q14181 598 aa9.19□□□□□ -0.94
CAPN13-206ENST00000485248 GCC1Q96CN9 775 aa9.19□□□□□ -0.94
CAPN13-206ENST00000485248 PIM2Q9P1W9 311 aa9.19□□□□□ -0.94
CAPN13-206ENST00000485248 C4BP0C0L5 1744 aa9.19□□□□□ -0.94
CAPN13-206ENST00000485248 KIF13BQ9NQT8 1826 aa9.19□□□□□ -0.94
CAPN13-206ENST00000485248 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms