RNA–Protein interactions for RNA: ENST00000485158.1

NUP188-206, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 392 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-206ENST00000485158 COG3Q96JB2 828 aa19.39■□□□□ 0.69
NUP188-206ENST00000485158 TFCP2L1Q9NZI6 479 aa19.39■□□□□ 0.69
NUP188-206ENST00000485158 RTL1A6NKG5 1358 aa19.39■□□□□ 0.69
NUP188-206ENST00000485158 DOT1LQ8TEK3 1739 aa19.39■□□□□ 0.69
NUP188-206ENST00000485158 MEGF6O75095 1541 aa19.38■□□□□ 0.69
NUP188-206ENST00000485158 GPR162Q16538 588 aa19.38■□□□□ 0.69
NUP188-206ENST00000485158 ZCRB1Q8TBF4 217 aaKnown RBP19.38■□□□□ 0.69
NUP188-206ENST00000485158 LTV1Q96GA3 475 aaPredicted RBP19.38■□□□□ 0.69
NUP188-206ENST00000485158 CGNL1Q0VF96 1302 aa19.37■□□□□ 0.69
NUP188-206ENST00000485158 KCNQ4P56696 695 aa19.36■□□□□ 0.69
NUP188-206ENST00000485158 SYTL4Q96C24 671 aaPredicted RBP19.36■□□□□ 0.69
NUP188-206ENST00000485158 AMPHP49418 695 aa19.35■□□□□ 0.69
NUP188-206ENST00000485158 TONSLQ96HA7 1378 aa19.34■□□□□ 0.69
NUP188-206ENST00000485158 ST20-MTHFSA0A0A6YYL1 179 aa19.34■□□□□ 0.69
NUP188-206ENST00000485158 FBLN1P23142 703 aa19.34■□□□□ 0.69
NUP188-206ENST00000485158 NBPF6Q5VWK0 638 aa19.34■□□□□ 0.69
NUP188-206ENST00000485158 NBPF4Q96M43 638 aa19.34■□□□□ 0.69
NUP188-206ENST00000485158 CCNL1Q9UK58 526 aaPredicted RBP19.34■□□□□ 0.69
NUP188-206ENST00000485158 RGPD2P0DJD1 1756 aa19.34■□□□□ 0.69
NUP188-206ENST00000485158 NLGN2Q8NFZ4 835 aa19.33■□□□□ 0.68
NUP188-206ENST00000485158 SENP3-EIF4A1A0A087X0R7 540 aa19.32■□□□□ 0.68
NUP188-206ENST00000485158 USP47Q96K76 1375 aa19.32■□□□□ 0.68
NUP188-206ENST00000485158 FYB1O15117 783 aa19.31■□□□□ 0.68
NUP188-206ENST00000485158 HMGB2P26583 209 aaKnown RBP19.31■□□□□ 0.68
NUP188-206ENST00000485158 COL23A1Q86Y22 540 aaPredicted RBP19.31■□□□□ 0.68
NUP188-206ENST00000485158 CEP350Q5VT06 3117 aa19.3■□□□□ 0.68
NUP188-206ENST00000485158 GRIN3BO60391 1043 aa19.3■□□□□ 0.68
NUP188-206ENST00000485158 KIF24Q5T7B8 1368 aa19.3■□□□□ 0.68
NUP188-206ENST00000485158 KLHL34Q8N239 644 aa19.29■□□□□ 0.68
NUP188-206ENST00000485158 INSRP06213 1382 aa19.29■□□□□ 0.68
NUP188-206ENST00000485158 GIGYF1O75420 1035 aaPredicted RBP19.28■□□□□ 0.68
NUP188-206ENST00000485158 YBX3P16989 372 aaKnown RBP eCLIP19.28■□□□□ 0.68
NUP188-206ENST00000485158 RRS1Q15050 365 aaKnown RBP19.28■□□□□ 0.68
NUP188-206ENST00000485158 RAPGEF4Q8WZA2 1011 aa19.28■□□□□ 0.68
NUP188-206ENST00000485158 SMG6Q86US8 1419 aaKnown RBP19.27■□□□□ 0.68
NUP188-206ENST00000485158 C5P01031 1676 aa19.27■□□□□ 0.67
NUP188-206ENST00000485158 PCDH11XQ9BZA7 1347 aa19.26■□□□□ 0.67
NUP188-206ENST00000485158 PCDH11YQ9BZA8 1340 aa19.26■□□□□ 0.67
NUP188-206ENST00000485158 FLAD1Q8NFF5 587 aa19.26■□□□□ 0.67
NUP188-206ENST00000485158 CD2APQ9Y5K6 639 aa19.26■□□□□ 0.67
NUP188-206ENST00000485158 TATP17735 454 aaPredicted RBP19.25■□□□□ 0.67
NUP188-206ENST00000485158 PELP1Q8IZL8 1130 aaKnown RBP19.25■□□□□ 0.67
NUP188-206ENST00000485158 GGNBP2Q9H3C7 697 aa19.25■□□□□ 0.67
NUP188-206ENST00000485158 FLT4P35916 1363 aa19.24■□□□□ 0.67
NUP188-206ENST00000485158 TAF1LQ8IZX4 1826 aa19.24■□□□□ 0.67
NUP188-206ENST00000485158 HSP90AB2PQ58FF8 381 aa19.24■□□□□ 0.67
NUP188-206ENST00000485158 USHBP1Q8N6Y0 703 aa19.24■□□□□ 0.67
NUP188-206ENST00000485158 PALLDQ8WX93 1383 aa19.23■□□□□ 0.67
NUP188-206ENST00000485158 NCAPD2Q15021 1401 aa19.23■□□□□ 0.67
NUP188-206ENST00000485158 CYP27B1O15528 508 aa19.22■□□□□ 0.67
NUP188-206ENST00000485158 TMF1P82094 1093 aa19.22■□□□□ 0.67
NUP188-206ENST00000485158 MSH5O43196 834 aa19.21■□□□□ 0.67
NUP188-206ENST00000485158 NKX1-1Q15270 411 aaPredicted RBP19.2■□□□□ 0.66
NUP188-206ENST00000485158 SMARCC1Q92922 1105 aaPredicted RBP19.2■□□□□ 0.66
NUP188-206ENST00000485158 C4BP0C0L5 1744 aa19.2■□□□□ 0.66
NUP188-206ENST00000485158 PKD1L3Q7Z443 1732 aa19.2■□□□□ 0.66
NUP188-206ENST00000485158 TOGARAM1Q9Y4F4 1720 aa19.2■□□□□ 0.66
NUP188-206ENST00000485158 MSL1Q68DK7 614 aa19.19■□□□□ 0.66
NUP188-206ENST00000485158 ADCY9O60503 1353 aa19.19■□□□□ 0.66
NUP188-206ENST00000485158 KIF20BQ96Q89 1820 aa19.18■□□□□ 0.66
NUP188-206ENST00000485158 CDCA8Q53HL2 280 aa19.18■□□□□ 0.66
NUP188-206ENST00000485158 MPRIPQ6WCQ1 1025 aa19.18■□□□□ 0.66
NUP188-206ENST00000485158 ITGB4P16144 1822 aa19.18■□□□□ 0.66
NUP188-206ENST00000485158 AMIGO3Q86WK7 504 aa19.17■□□□□ 0.66
NUP188-206ENST00000485158 NSD3Q9BZ95 1437 aa19.17■□□□□ 0.66
NUP188-206ENST00000485158 ATP10DQ9P241 1426 aa19.17■□□□□ 0.66
NUP188-206ENST00000485158 UBR3Q6ZT12 1888 aa19.16■□□□□ 0.66
NUP188-206ENST00000485158 PIGBQ92521 554 aa19.16■□□□□ 0.66
NUP188-206ENST00000485158 CARD14Q9BXL6 1004 aa19.16■□□□□ 0.66
NUP188-206ENST00000485158 MAP2P11137 1827 aaKnown RBP19.16■□□□□ 0.66
NUP188-206ENST00000485158 ANKRD26Q9UPS8 1709 aa19.15■□□□□ 0.66
NUP188-206ENST00000485158 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.15■□□□□ 0.66
NUP188-206ENST00000485158 SSFA2P28290 1259 aa19.14■□□□□ 0.65
NUP188-206ENST00000485158 AK7Q96M32 723 aa19.14■□□□□ 0.65
NUP188-206ENST00000485158 EMILIN1Q9Y6C2 1016 aa19.13■□□□□ 0.65
NUP188-206ENST00000485158 WASHC2AQ641Q2 1341 aa19.13■□□□□ 0.65
NUP188-206ENST00000485158 PLEKHG2Q9H7P9 1386 aa19.12■□□□□ 0.65
NUP188-206ENST00000485158 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.12■□□□□ 0.65
NUP188-206ENST00000485158 SPG7Q9UQ90 795 aa19.12■□□□□ 0.65
NUP188-206ENST00000485158 LOC102724428A0A0B4J2F2 783 aa19.11■□□□□ 0.65
NUP188-206ENST00000485158 SIK1P57059 783 aa19.11■□□□□ 0.65
NUP188-206ENST00000485158 IFFO2Q5TF58 517 aa19.1■□□□□ 0.65
NUP188-206ENST00000485158 LINC00116Q8NCU8 138 aa19.1■□□□□ 0.65
NUP188-206ENST00000485158 GPBP1L1Q9HC44 474 aaPredicted RBP19.1■□□□□ 0.65
NUP188-206ENST00000485158 IGSF1Q8N6C5 1336 aa19.09■□□□□ 0.65
NUP188-206ENST00000485158 EYA1Q99502 592 aa19.08■□□□□ 0.64
NUP188-206ENST00000485158 CICQ96RK0 1608 aaPredicted RBP19.07■□□□□ 0.64
NUP188-206ENST00000485158 PHF14O94880 888 aa19.07■□□□□ 0.64
NUP188-206ENST00000485158 TMOD3Q9NYL9 352 aa19.07■□□□□ 0.64
NUP188-206ENST00000485158 ITPK1Q13572 414 aa19.06■□□□□ 0.64
NUP188-206ENST00000485158 SMIM5Q71RC9 77 aa19.06■□□□□ 0.64
NUP188-206ENST00000485158 ASAP1Q9ULH1 1129 aa19.06■□□□□ 0.64
NUP188-206ENST00000485158 PHKG2P15735 406 aa19.05■□□□□ 0.64
NUP188-206ENST00000485158 HSPA6P17066 643 aa19.05■□□□□ 0.64
NUP188-206ENST00000485158 IFNL2Q8IZJ0 200 aa19.05■□□□□ 0.64
NUP188-206ENST00000485158 ZNF831Q5JPB2 1677 aa19.05■□□□□ 0.64
NUP188-206ENST00000485158 KIF13BQ9NQT8 1826 aa19.04■□□□□ 0.64
NUP188-206ENST00000485158 ATG3Q9NT62 314 aa19.04■□□□□ 0.64
NUP188-206ENST00000485158 POLKQ9UBT6 870 aa19.04■□□□□ 0.64
NUP188-206ENST00000485158 KDRP35968 1356 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms