RNA–Protein interactions for RNA: ENST00000485122.6

EXOSC1-210, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-210ENST00000485122 PXDNLA1KZ92 1463 aa15.15■□□□□ 0.02
EXOSC1-210ENST00000485122 CCDC7Q96M83 1385 aa15.14■□□□□ 0.01
EXOSC1-210ENST00000485122 C9orf131Q5VYM1 1079 aa15.14■□□□□ 0.01
EXOSC1-210ENST00000485122 MKRN1Q9UHC7 482 aaKnown RBP15.14■□□□□ 0.01
EXOSC1-210ENST00000485122 TOGARAM1Q9Y4F4 1720 aa15.14■□□□□ 0.01
EXOSC1-210ENST00000485122 PLEKHG2Q9H7P9 1386 aa15.13■□□□□ 0.01
EXOSC1-210ENST00000485122 CCDC85CA6NKD9 419 aa15.13■□□□□ 0.01
EXOSC1-210ENST00000485122 RGS19P49795 217 aa15.13■□□□□ 0.01
EXOSC1-210ENST00000485122 ARHGAP27Q6ZUM4 889 aa15.13■□□□□ 0.01
EXOSC1-210ENST00000485122 SMIM5Q71RC9 77 aa15.13■□□□□ 0.01
EXOSC1-210ENST00000485122 SLC4A1APQ9BWU0 796 aaKnown RBP15.13■□□□□ 0.01
EXOSC1-210ENST00000485122 BCS1LQ9Y276 419 aa15.13■□□□□ 0.01
EXOSC1-210ENST00000485122 CCNL1Q9UK58 526 aaPredicted RBP15.12■□□□□ 0.01
EXOSC1-210ENST00000485122 LBX1P52954 281 aa15.11■□□□□ 0.01
EXOSC1-210ENST00000485122 KDM2BQ8NHM5 1336 aa15.11■□□□□ 0.01
EXOSC1-210ENST00000485122 NSD2O96028 1365 aa15.11■□□□□ 0.01
EXOSC1-210ENST00000485122 KIF13BQ9NQT8 1826 aa15.1■□□□□ 0.01
EXOSC1-210ENST00000485122 BRCA1P38398 1863 aaKnown RBP15.1■□□□□ 0.01
EXOSC1-210ENST00000485122 CTCFP49711 727 aaPredicted RBP15.1■□□□□ 0.01
EXOSC1-210ENST00000485122 SYTL4Q96C24 671 aaPredicted RBP15.1■□□□□ 0.01
EXOSC1-210ENST00000485122 ERBB3P21860 1342 aa15.1■□□□□ 0.01
EXOSC1-210ENST00000485122 TAF1LQ8IZX4 1826 aa15.1■□□□□ 0.01
EXOSC1-210ENST00000485122 NLRP6P59044 892 aa15.09■□□□□ 0.01
EXOSC1-210ENST00000485122 SOX12O15370 315 aa15.08■□□□□ 0
EXOSC1-210ENST00000485122 AMIGO3Q86WK7 504 aa15.08■□□□□ 0
EXOSC1-210ENST00000485122 LOC105371045A0A1W2PR82 267 aa15.07■□□□□ 0
EXOSC1-210ENST00000485122 CDK19Q9BWU1 502 aa15.07■□□□□ 0
EXOSC1-210ENST00000485122 PLEKHG3A1L390 1219 aa15.06■□□□□ 0
EXOSC1-210ENST00000485122 ARHGEF25Q86VW2 580 aa15.06■□□□□ 0
EXOSC1-210ENST00000485122 ARFGEF1Q9Y6D6 1849 aa15.06■□□□□ 0
EXOSC1-210ENST00000485122 SBF1O95248 1867 aa15.06■□□□□ 0
EXOSC1-210ENST00000485122 UBR3Q6ZT12 1888 aa15.06■□□□□ 0
EXOSC1-210ENST00000485122 IL2RBP14784 551 aa15.05■□□□□ -0
EXOSC1-210ENST00000485122 PRIM1P49642 420 aaKnown RBP15.05■□□□□ -0
EXOSC1-210ENST00000485122 AIDAQ96BJ3 306 aa15.05■□□□□ -0
EXOSC1-210ENST00000485122 CCDC61Q9Y6R9 512 aa15.05■□□□□ -0
EXOSC1-210ENST00000485122 PDE4DIPQ5VU43 2346 aa15.05■□□□□ -0
EXOSC1-210ENST00000485122 VIRMAQ69YN4 1812 aaKnown RBP15.04■□□□□ -0
EXOSC1-210ENST00000485122 RNF181Q9P0P0 153 aa15.04■□□□□ -0
EXOSC1-210ENST00000485122 C4BP0C0L5 1744 aa15.03■□□□□ -0
EXOSC1-210ENST00000485122 ANKRD36BQ8N2N9 1353 aa15.03■□□□□ -0
EXOSC1-210ENST00000485122 A0A0G2JLW4 131 aa15.03■□□□□ -0
EXOSC1-210ENST00000485122 FCHSD2O94868 740 aa15.02■□□□□ -0
EXOSC1-210ENST00000485122 PHF14O94880 888 aa15.02■□□□□ -0
EXOSC1-210ENST00000485122 HSPA8P11142 646 aaKnown RBP15.02■□□□□ -0
EXOSC1-210ENST00000485122 DDX54Q8TDD1 881 aaKnown RBP15.02■□□□□ -0
EXOSC1-210ENST00000485122 CFAP44Q96MT7 982 aa15.02■□□□□ -0
EXOSC1-210ENST00000485122 NFAT5O94916 1531 aa15.02□□□□□ -0.01
EXOSC1-210ENST00000485122 NLRP2Q9NX02 1062 aa15.01□□□□□ -0.01
EXOSC1-210ENST00000485122 CNTNAP1P78357 1384 aa15□□□□□ -0.01
EXOSC1-210ENST00000485122 TNRC18O15417 2968 aaPredicted RBP14.99□□□□□ -0.01
EXOSC1-210ENST00000485122 CREBZFQ9NS37 354 aa14.99□□□□□ -0.01
EXOSC1-210ENST00000485122 FLAD1Q8NFF5 587 aa14.98□□□□□ -0.01
EXOSC1-210ENST00000485122 WBP1LQ9NX94 342 aa14.98□□□□□ -0.01
EXOSC1-210ENST00000485122 USP47Q96K76 1375 aa14.98□□□□□ -0.01
EXOSC1-210ENST00000485122 DPEP1P16444 411 aa14.97□□□□□ -0.01
EXOSC1-210ENST00000485122 TIAM2Q8IVF5 1701 aa14.97□□□□□ -0.01
EXOSC1-210ENST00000485122 VEGFBP49765 207 aa14.96□□□□□ -0.01
EXOSC1-210ENST00000485122 LTN1O94822 1766 aa14.96□□□□□ -0.02
EXOSC1-210ENST00000485122 VEGFAP15692 232 aaPredicted RBP14.95□□□□□ -0.02
EXOSC1-210ENST00000485122 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.94□□□□□ -0.02
EXOSC1-210ENST00000485122 MMP10P09238 476 aa14.94□□□□□ -0.02
EXOSC1-210ENST00000485122 TGFB2P61812 414 aa14.94□□□□□ -0.02
EXOSC1-210ENST00000485122 AK7Q96M32 723 aa14.93□□□□□ -0.02
EXOSC1-210ENST00000485122 RASSF7Q02833 373 aa14.92□□□□□ -0.02
EXOSC1-210ENST00000485122 KCNH5Q8NCM2 988 aa14.92□□□□□ -0.02
EXOSC1-210ENST00000485122 CCDC88AQ3V6T2 1871 aa14.91□□□□□ -0.02
EXOSC1-210ENST00000485122 PALLDQ8WX93 1383 aa14.9□□□□□ -0.02
EXOSC1-210ENST00000485122 POTECB2RU33 542 aa14.9□□□□□ -0.02
EXOSC1-210ENST00000485122 DCAF5Q96JK2 942 aa14.9□□□□□ -0.02
EXOSC1-210ENST00000485122 C4AP0C0L4 1744 aa14.89□□□□□ -0.03
EXOSC1-210ENST00000485122 GLTPD2A6NH11 291 aa14.89□□□□□ -0.03
EXOSC1-210ENST00000485122 POTEIP0CG38 1075 aa14.89□□□□□ -0.03
EXOSC1-210ENST00000485122 POTEJP0CG39 1038 aa14.89□□□□□ -0.03
EXOSC1-210ENST00000485122 KCNA3P22001 575 aa14.89□□□□□ -0.03
EXOSC1-210ENST00000485122 SRPK2P78362 688 aaKnown RBP14.89□□□□□ -0.03
EXOSC1-210ENST00000485122 ANKRD24Q8TF21 1146 aa14.89□□□□□ -0.03
EXOSC1-210ENST00000485122 CABP2Q9NPB3 220 aa14.89□□□□□ -0.03
EXOSC1-210ENST00000485122 PRPF38BQ5VTL8 546 aaKnown RBP14.88□□□□□ -0.03
EXOSC1-210ENST00000485122 FAM208AQ9UK61 1670 aaKnown RBP14.87□□□□□ -0.03
EXOSC1-210ENST00000485122 KDM6AO15550 1401 aaPredicted RBP14.86□□□□□ -0.03
EXOSC1-210ENST00000485122 CABP1Q9NZU7 370 aa14.86□□□□□ -0.03
EXOSC1-210ENST00000485122 RGPD2P0DJD1 1756 aa14.85□□□□□ -0.03
EXOSC1-210ENST00000485122 NSD3Q9BZ95 1437 aa14.85□□□□□ -0.03
EXOSC1-210ENST00000485122 SSFA2P28290 1259 aa14.85□□□□□ -0.03
EXOSC1-210ENST00000485122 MCOLN1Q9GZU1 580 aa14.85□□□□□ -0.03
EXOSC1-210ENST00000485122 MEGF6O75095 1541 aa14.84□□□□□ -0.03
EXOSC1-210ENST00000485122 CHADLQ6NUI6 762 aa14.84□□□□□ -0.03
EXOSC1-210ENST00000485122 TSKSQ9UJT2 592 aa14.84□□□□□ -0.03
EXOSC1-210ENST00000485122 KDM2AQ9Y2K7 1162 aa14.84□□□□□ -0.03
EXOSC1-210ENST00000485122 TTC21BQ7Z4L5 1316 aa14.84□□□□□ -0.03
EXOSC1-210ENST00000485122 ZC3H4Q9UPT8 1303 aaKnown RBP14.84□□□□□ -0.03
EXOSC1-210ENST00000485122 MAP2P11137 1827 aaKnown RBP14.83□□□□□ -0.04
EXOSC1-210ENST00000485122 DALRD3Q5D0E6 543 aaKnown RBP14.83□□□□□ -0.04
EXOSC1-210ENST00000485122 PIM2Q9P1W9 311 aa14.83□□□□□ -0.04
EXOSC1-210ENST00000485122 THSD7BQ9C0I4 1608 aa14.82□□□□□ -0.04
EXOSC1-210ENST00000485122 LINC00116Q8NCU8 138 aa14.82□□□□□ -0.04
EXOSC1-210ENST00000485122 MPHOSPH9Q99550 1183 aa14.82□□□□□ -0.04
EXOSC1-210ENST00000485122 CCDC87Q9NVE4 849 aa14.82□□□□□ -0.04
EXOSC1-210ENST00000485122 LTBP1Q14766 1721 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms