RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 PARD3Q8TEW0 1356 aa7.24□□□□□ -1.25
CCDC39-205ENST00000485055 KIF20BQ96Q89 1820 aa7.24□□□□□ -1.25
CCDC39-205ENST00000485055 POGKQ9P215 609 aa7.24□□□□□ -1.25
CCDC39-205ENST00000485055 USP21Q9UK80 565 aa7.24□□□□□ -1.25
CCDC39-205ENST00000485055 LTN1O94822 1766 aa7.23□□□□□ -1.25
CCDC39-205ENST00000485055 TRIM66O15016 1216 aa7.23□□□□□ -1.25
CCDC39-205ENST00000485055 L3MBTL2Q969R5 705 aa7.23□□□□□ -1.25
CCDC39-205ENST00000485055 CDK19Q9BWU1 502 aa7.23□□□□□ -1.25
CCDC39-205ENST00000485055 SERPINA10Q9UK55 444 aa7.23□□□□□ -1.25
CCDC39-205ENST00000485055 THRAP3Q9Y2W1 955 aaKnown RBP7.23□□□□□ -1.25
CCDC39-205ENST00000485055 SPATA31A5Q5VU36 1347 aa7.23□□□□□ -1.25
CCDC39-205ENST00000485055 SPATA31A7Q8IWB4 1347 aa7.23□□□□□ -1.25
CCDC39-205ENST00000485055 NUP188Q5SRE5 1749 aa7.23□□□□□ -1.25
CCDC39-205ENST00000485055 FOXO3O43524 673 aa7.22□□□□□ -1.25
CCDC39-205ENST00000485055 STK26Q9P289 416 aa7.22□□□□□ -1.25
CCDC39-205ENST00000485055 EVC2Q86UK5 1308 aa7.22□□□□□ -1.25
CCDC39-205ENST00000485055 HOXD11P31277 338 aaPredicted RBP7.22□□□□□ -1.25
CCDC39-205ENST00000485055 NBPF8Q3BBV2 869 aa7.22□□□□□ -1.25
CCDC39-205ENST00000485055 RGPD5Q99666 1765 aa7.22□□□□□ -1.25
CCDC39-205ENST00000485055 NHSQ6T4R5 1651 aa7.22□□□□□ -1.25
CCDC39-205ENST00000485055 TEX2Q8IWB9 1127 aa7.22□□□□□ -1.25
CCDC39-205ENST00000485055 KRI1Q8N9T8 703 aaKnown RBP7.22□□□□□ -1.25
CCDC39-205ENST00000485055 DDX17Q92841 729 aaKnown RBP7.22□□□□□ -1.25
CCDC39-205ENST00000485055 SPATA32Q96LK8 384 aa7.22□□□□□ -1.25
CCDC39-205ENST00000485055 COL5A2P05997 1499 aaPredicted RBP7.21□□□□□ -1.25
CCDC39-205ENST00000485055 EDC4Q6P2E9 1401 aaKnown RBP7.21□□□□□ -1.25
CCDC39-205ENST00000485055 KIF24Q5T7B8 1368 aa7.21□□□□□ -1.25
CCDC39-205ENST00000485055 LOC102724159A0A0B4J2E5 919 aa7.21□□□□□ -1.26
CCDC39-205ENST00000485055 PWP2Q15269 919 aaKnown RBP7.21□□□□□ -1.26
CCDC39-205ENST00000485055 NOL8Q76FK4 1167 aaKnown RBP7.21□□□□□ -1.26
CCDC39-205ENST00000485055 TRAK1Q9UPV9 953 aa7.21□□□□□ -1.26
CCDC39-205ENST00000485055 OVOS2A0A0J9YW53 1432 aa7.21□□□□□ -1.26
CCDC39-205ENST00000485055 OVOS2Q6IE36 1432 aa7.21□□□□□ -1.26
CCDC39-205ENST00000485055 ZNF831Q5JPB2 1677 aa7.2□□□□□ -1.26
CCDC39-205ENST00000485055 ACEP12821 1306 aa7.2□□□□□ -1.26
CCDC39-205ENST00000485055 MCM6Q14566 821 aa7.2□□□□□ -1.26
CCDC39-205ENST00000485055 NBPF1Q3BBV0 1214 aa7.2□□□□□ -1.26
CCDC39-205ENST00000485055 NCAPD2Q15021 1401 aa7.2□□□□□ -1.26
CCDC39-205ENST00000485055 SHANK3Q9BYB0 1731 aa7.2□□□□□ -1.26
CCDC39-205ENST00000485055 FAM83GA6ND36 823 aa7.2□□□□□ -1.26
CCDC39-205ENST00000485055 SPATA31A1Q5TZJ5 1347 aa7.19□□□□□ -1.26
CCDC39-205ENST00000485055 KIAA1522Q9P206 1035 aaPredicted RBP7.19□□□□□ -1.26
CCDC39-205ENST00000485055 CASZ1Q86V15 1759 aa7.19□□□□□ -1.26
CCDC39-205ENST00000485055 ARHGEF1Q92888 912 aaKnown RBP7.19□□□□□ -1.26
CCDC39-205ENST00000485055 C8orf37Q96NL8 207 aa7.19□□□□□ -1.26
CCDC39-205ENST00000485055 ROCK2O75116 1388 aaKnown RBP7.19□□□□□ -1.26
CCDC39-205ENST00000485055 CRB1P82279 1406 aa7.19□□□□□ -1.26
CCDC39-205ENST00000485055 PAPPAQ13219 1627 aa7.19□□□□□ -1.26
CCDC39-205ENST00000485055 CICQ96RK0 1608 aaPredicted RBP7.19□□□□□ -1.26
CCDC39-205ENST00000485055 CDCA7Q9BWT1 371 aaPredicted RBP7.18□□□□□ -1.26
CCDC39-205ENST00000485055 MINK1Q8N4C8 1332 aaPredicted RBP7.18□□□□□ -1.26
CCDC39-205ENST00000485055 PKD1L3Q7Z443 1732 aa7.18□□□□□ -1.26
CCDC39-205ENST00000485055 MARCH6O60337 910 aa7.18□□□□□ -1.26
CCDC39-205ENST00000485055 NLRP13Q86W25 1043 aa7.18□□□□□ -1.26
CCDC39-205ENST00000485055 RTL1A6NKG5 1358 aa7.17□□□□□ -1.26
CCDC39-205ENST00000485055 NCLP19338 710 aaKnown RBP7.17□□□□□ -1.26
CCDC39-205ENST00000485055 RBM26Q5T8P6 1007 aaKnown RBP7.17□□□□□ -1.26
CCDC39-205ENST00000485055 MIER1Q8N108 512 aa7.17□□□□□ -1.26
CCDC39-205ENST00000485055 TESK2Q96S53 571 aa7.17□□□□□ -1.26
CCDC39-205ENST00000485055 PLSCR2Q9NRY7 297 aa7.17□□□□□ -1.26
CCDC39-205ENST00000485055 RIPOR2Q9Y4F9 1068 aa7.17□□□□□ -1.26
CCDC39-205ENST00000485055 NUTM2BA6NNL0 878 aaPredicted RBP7.17□□□□□ -1.26
CCDC39-205ENST00000485055 NUTM2EB1AL46 878 aaPredicted RBP7.17□□□□□ -1.26
CCDC39-205ENST00000485055 ZNF662Q6ZS27 426 aa7.17□□□□□ -1.26
CCDC39-205ENST00000485055 NUTM2AQ8IVF1 878 aaPredicted RBP7.17□□□□□ -1.26
CCDC39-205ENST00000485055 KCNH5Q8NCM2 988 aa7.17□□□□□ -1.26
CCDC39-205ENST00000485055 LY75O60449 1722 aa7.17□□□□□ -1.26
CCDC39-205ENST00000485055 ANKRD13AQ8IZ07 590 aa7.16□□□□□ -1.26
CCDC39-205ENST00000485055 CCDC7Q96M83 1385 aa7.16□□□□□ -1.26
CCDC39-205ENST00000485055 CNPY4Q8N129 248 aa7.16□□□□□ -1.26
CCDC39-205ENST00000485055 TTC21BQ7Z4L5 1316 aa7.16□□□□□ -1.26
CCDC39-205ENST00000485055 KIAA0232Q92628 1395 aa7.16□□□□□ -1.26
CCDC39-205ENST00000485055 NGDNQ8NEJ9 315 aaKnown RBP7.15□□□□□ -1.26
CCDC39-205ENST00000485055 PPP1R1BQ9UD71 204 aaPredicted RBP7.15□□□□□ -1.26
CCDC39-205ENST00000485055 ANKRD36BQ8N2N9 1353 aa7.15□□□□□ -1.26
CCDC39-205ENST00000485055 ARHGEF25Q86VW2 580 aa7.15□□□□□ -1.27
CCDC39-205ENST00000485055 ANKRD62A6NC57 917 aa7.14□□□□□ -1.27
CCDC39-205ENST00000485055 ADAMTS2O95450 1211 aa7.14□□□□□ -1.27
CCDC39-205ENST00000485055 IVNS1ABPQ9Y6Y0 642 aa7.14□□□□□ -1.27
CCDC39-205ENST00000485055 SMG6Q86US8 1419 aaKnown RBP7.14□□□□□ -1.27
CCDC39-205ENST00000485055 RIOK3O14730 519 aaKnown RBP7.14□□□□□ -1.27
CCDC39-205ENST00000485055 GCP02774 474 aa7.14□□□□□ -1.27
CCDC39-205ENST00000485055 PLCD4Q9BRC7 762 aa7.14□□□□□ -1.27
CCDC39-205ENST00000485055 NSD2O96028 1365 aa7.13□□□□□ -1.27
CCDC39-205ENST00000485055 TONSLQ96HA7 1378 aa7.13□□□□□ -1.27
CCDC39-205ENST00000485055 TNS2Q63HR2 1409 aa7.13□□□□□ -1.27
CCDC39-205ENST00000485055 AAMPQ13685 434 aa7.13□□□□□ -1.27
CCDC39-205ENST00000485055 KRT27Q7Z3Y8 459 aa7.13□□□□□ -1.27
CCDC39-205ENST00000485055 SEPT12Q8IYM1 358 aa7.13□□□□□ -1.27
CCDC39-205ENST00000485055 PMFBP1Q8TBY8 1022 aa7.13□□□□□ -1.27
CCDC39-205ENST00000485055 STK24Q9Y6E0 443 aa7.13□□□□□ -1.27
CCDC39-205ENST00000485055 WDR17Q8IZU2 1322 aa7.13□□□□□ -1.27
CCDC39-205ENST00000485055 CENPBP07199 599 aaPredicted RBP7.13□□□□□ -1.27
CCDC39-205ENST00000485055 SIN3AQ96ST3 1273 aa7.13□□□□□ -1.27
CCDC39-205ENST00000485055 KTN1Q86UP2 1357 aaKnown RBP7.12□□□□□ -1.27
CCDC39-205ENST00000485055 MRRFQ96E11 262 aaKnown RBP7.12□□□□□ -1.27
CCDC39-205ENST00000485055 CARD10Q9BWT7 1032 aa7.12□□□□□ -1.27
CCDC39-205ENST00000485055 ANAPC15P60006 121 aa7.12□□□□□ -1.27
CCDC39-205ENST00000485055 FAM196AQ6ZSG2 479 aa7.12□□□□□ -1.27
CCDC39-205ENST00000485055 BTG4Q9NY30 223 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms