RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 LYSMD3Q7Z3D4 306 aa9.18□□□□□ -0.94
SMC4-215ENST00000484799 GTF2E1P29083 439 aaPredicted RBP9.17□□□□□ -0.94
SMC4-215ENST00000484799 VAC14Q08AM6 782 aa9.17□□□□□ -0.94
SMC4-215ENST00000484799 ERVK-9P63128 1117 aa9.16□□□□□ -0.94
SMC4-215ENST00000484799 USP4Q13107 963 aa9.16□□□□□ -0.94
SMC4-215ENST00000484799 PRICKLE2Q7Z3G6 844 aa9.16□□□□□ -0.94
SMC4-215ENST00000484799 RNF135Q8IUD6 432 aa9.16□□□□□ -0.94
SMC4-215ENST00000484799 SIRT1Q96EB6 747 aa9.16□□□□□ -0.94
SMC4-215ENST00000484799 A0A1W2PRU2 124 aa9.15□□□□□ -0.94
SMC4-215ENST00000484799 CCDC155Q8N6L0 562 aa9.15□□□□□ -0.94
SMC4-215ENST00000484799 CDC14CA4D256 554 aa9.14□□□□□ -0.95
SMC4-215ENST00000484799 FLIIQ13045 1269 aa9.14□□□□□ -0.95
SMC4-215ENST00000484799 RNF217Q8TC41 542 aa9.14□□□□□ -0.95
SMC4-215ENST00000484799 DOLKQ9UPQ8 538 aa9.14□□□□□ -0.95
SMC4-215ENST00000484799 SOX11P35716 441 aa9.13□□□□□ -0.95
SMC4-215ENST00000484799 RNF144AP50876 292 aaPredicted RBP9.13□□□□□ -0.95
SMC4-215ENST00000484799 MCM6Q14566 821 aa9.13□□□□□ -0.95
SMC4-215ENST00000484799 STK17AQ9UEE5 414 aa9.13□□□□□ -0.95
SMC4-215ENST00000484799 ERBB4Q15303 1308 aa9.12□□□□□ -0.95
SMC4-215ENST00000484799 UBTFP17480 764 aaKnown RBP9.12□□□□□ -0.95
SMC4-215ENST00000484799 GNRH1P01148 92 aa9.11□□□□□ -0.95
SMC4-215ENST00000484799 GPC1P35052 558 aa9.11□□□□□ -0.95
SMC4-215ENST00000484799 IRF5Q13568 498 aa9.11□□□□□ -0.95
SMC4-215ENST00000484799 ESCO1Q5FWF5 840 aa9.11□□□□□ -0.95
SMC4-215ENST00000484799 SV2AQ7L0J3 742 aa9.11□□□□□ -0.95
SMC4-215ENST00000484799 ZSCAN1Q8NBB4 408 aa9.11□□□□□ -0.95
SMC4-215ENST00000484799 SLC35F4A4IF30 521 aa9.1□□□□□ -0.95
SMC4-215ENST00000484799 RHOQP17081 205 aa9.1□□□□□ -0.95
SMC4-215ENST00000484799 SCTRP47872 440 aa9.1□□□□□ -0.95
SMC4-215ENST00000484799 TMEM132AQ24JP5 1023 aa9.1□□□□□ -0.95
SMC4-215ENST00000484799 OXLD1Q5BKU9 147 aa9.1□□□□□ -0.95
SMC4-215ENST00000484799 FOXR1Q6PIV2 292 aa9.1□□□□□ -0.95
SMC4-215ENST00000484799 VWA5B2Q8N398 1253 aa9.1□□□□□ -0.95
SMC4-215ENST00000484799 ARHGEF10LQ9HCE6 1279 aa9.1□□□□□ -0.95
SMC4-215ENST00000484799 GPR37L1O60883 481 aa9.09□□□□□ -0.95
SMC4-215ENST00000484799 ITGA6P23229 1130 aa9.09□□□□□ -0.95
SMC4-215ENST00000484799 FOXD4L5Q5VV16 416 aaPredicted RBP9.09□□□□□ -0.95
SMC4-215ENST00000484799 RIPOR1Q6ZS17 1223 aa9.09□□□□□ -0.95
SMC4-215ENST00000484799 KDF1Q8NAX2 398 aaPredicted RBP9.09□□□□□ -0.95
SMC4-215ENST00000484799 POU4F2Q12837 409 aa9.08□□□□□ -0.96
SMC4-215ENST00000484799 CLN3Q13286 438 aa9.08□□□□□ -0.96
SMC4-215ENST00000484799 MAP7D1Q3KQU3 841 aa9.08□□□□□ -0.96
SMC4-215ENST00000484799 CCDC85AQ96PX6 553 aaPredicted RBP9.08□□□□□ -0.96
SMC4-215ENST00000484799 GAS2L1Q99501 681 aaPredicted RBP9.08□□□□□ -0.96
SMC4-215ENST00000484799 CDCA7Q9BWT1 371 aaPredicted RBP9.08□□□□□ -0.96
SMC4-215ENST00000484799 OSBPL3Q9H4L5 887 aa9.08□□□□□ -0.96
SMC4-215ENST00000484799 COG6Q9Y2V7 657 aa9.08□□□□□ -0.96
SMC4-215ENST00000484799 VSIG8P0DPA2 414 aa9.07□□□□□ -0.96
SMC4-215ENST00000484799 TMEM214Q6NUQ4 689 aaKnown RBP9.07□□□□□ -0.96
SMC4-215ENST00000484799 CNKSR1Q969H4 720 aa9.07□□□□□ -0.96
SMC4-215ENST00000484799 RAB6BQ9NRW1 208 aa9.07□□□□□ -0.96
SMC4-215ENST00000484799 GNASQ5JWF2 1037 aa9.06□□□□□ -0.96
SMC4-215ENST00000484799 ESYT1Q9BSJ8 1104 aa9.06□□□□□ -0.96
SMC4-215ENST00000484799 H7C1W4 665 aa9.05□□□□□ -0.96
SMC4-215ENST00000484799 TRAK2O60296 914 aa9.05□□□□□ -0.96
SMC4-215ENST00000484799 LCE2CQ5TA81 110 aa9.05□□□□□ -0.96
SMC4-215ENST00000484799 TAS1R3Q7RTX0 852 aa9.05□□□□□ -0.96
SMC4-215ENST00000484799 NANOS1Q8WY41 292 aaKnown RBP9.05□□□□□ -0.96
SMC4-215ENST00000484799 CNTNAP3BQ96NU0 1288 aa9.05□□□□□ -0.96
SMC4-215ENST00000484799 ZSCAN10Q96SZ4 725 aaPredicted RBP9.05□□□□□ -0.96
SMC4-215ENST00000484799 CNTNAP3Q9BZ76 1288 aa9.05□□□□□ -0.96
SMC4-215ENST00000484799 TIMMDC1Q9NPL8 285 aa9.05□□□□□ -0.96
SMC4-215ENST00000484799 CENPCQ03188 943 aa9.04□□□□□ -0.96
SMC4-215ENST00000484799 TSGA10IPQ3SY00 556 aa9.04□□□□□ -0.96
SMC4-215ENST00000484799 PHTF2Q8N3S3 785 aa9.04□□□□□ -0.96
SMC4-215ENST00000484799 COL25A1Q9BXS0 654 aaPredicted RBP9.04□□□□□ -0.96
SMC4-215ENST00000484799 PLPP7Q8NBV4 271 aa9.03□□□□□ -0.96
SMC4-215ENST00000484799 GMCL1Q96IK5 515 aa9.03□□□□□ -0.96
SMC4-215ENST00000484799 GRIP2Q9C0E4 1043 aa9.03□□□□□ -0.96
SMC4-215ENST00000484799 SKIP12755 728 aa9.02□□□□□ -0.97
SMC4-215ENST00000484799 NBPF10Q6P3W6 841 aaKnown RBP9.02□□□□□ -0.97
SMC4-215ENST00000484799 NBPF15Q8N660 670 aa9.02□□□□□ -0.97
SMC4-215ENST00000484799 DYRK1BQ9Y463 629 aa9.02□□□□□ -0.97
SMC4-215ENST00000484799 WASLO00401 505 aaPredicted RBP9.01□□□□□ -0.97
SMC4-215ENST00000484799 EML3Q32P44 896 aa9.01□□□□□ -0.97
SMC4-215ENST00000484799 WDR44Q5JSH3 913 aa9.01□□□□□ -0.97
SMC4-215ENST00000484799 GPR161Q8N6U8 529 aaKnown RBP9.01□□□□□ -0.97
SMC4-215ENST00000484799 XAGE2Q96GT9 111 aa9.01□□□□□ -0.97
SMC4-215ENST00000484799 TRERF1Q96PN7 1200 aa9.01□□□□□ -0.97
SMC4-215ENST00000484799 SENP3-EIF4A1A0A087X0R7 540 aa9□□□□□ -0.97
SMC4-215ENST00000484799 CSB-PGBD3P0DP91 1061 aa9□□□□□ -0.97
SMC4-215ENST00000484799 PHKA2P46019 1235 aa9□□□□□ -0.97
SMC4-215ENST00000484799 PGBD3Q8N328 593 aa9□□□□□ -0.97
SMC4-215ENST00000484799 POM121Q96HA1 1249 aa9□□□□□ -0.97
SMC4-215ENST00000484799 LZTS3O60299 673 aaPredicted RBP8.99□□□□□ -0.97
SMC4-215ENST00000484799 IL2RAP01589 272 aa8.99□□□□□ -0.97
SMC4-215ENST00000484799 F11P03951 625 aa8.99□□□□□ -0.97
SMC4-215ENST00000484799 PSME1Q06323 249 aa8.99□□□□□ -0.97
SMC4-215ENST00000484799 TRIM22Q8IYM9 498 aa8.99□□□□□ -0.97
SMC4-215ENST00000484799 NOD1Q9Y239 953 aa8.99□□□□□ -0.97
SMC4-215ENST00000484799 SPATA31C2B4DYI2 1134 aa8.98□□□□□ -0.97
SMC4-215ENST00000484799 TLR1Q15399 786 aa8.98□□□□□ -0.97
SMC4-215ENST00000484799 GDF10P55107 478 aa8.97□□□□□ -0.97
SMC4-215ENST00000484799 HDGFL1Q5TGJ6 251 aa8.96□□□□□ -0.98
SMC4-215ENST00000484799 ALG2Q9H553 416 aa8.96□□□□□ -0.98
SMC4-215ENST00000484799 SERTAD1Q9UHV2 236 aa8.96□□□□□ -0.98
SMC4-215ENST00000484799 NSFL1CQ9UNZ2 370 aaKnown RBP8.96□□□□□ -0.98
SMC4-215ENST00000484799 RBM19Q9Y4C8 960 aaKnown RBP8.96□□□□□ -0.98
SMC4-215ENST00000484799 A0A1B0GTH6 734 aa8.95□□□□□ -0.98
SMC4-215ENST00000484799 INHAP05111 366 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms