RNA–Protein interactions for RNA: ENST00000484686.1

CNTN4-216, Transcript of contactin 4, humanhuman

TSL 1 (best)

Gene CNTN4, Length 3,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN4-216ENST00000484686 TRPC5Q9UL62 973 aaPredicted RBP7.11□□□□□ -1.27
CNTN4-216ENST00000484686 BLMP54132 1417 aaPredicted RBP7.1□□□□□ -1.27
CNTN4-216ENST00000484686 SLIT2O94813 1529 aa7.1□□□□□ -1.27
CNTN4-216ENST00000484686 TCP11L2Q8N4U5 519 aa7.1□□□□□ -1.27
CNTN4-216ENST00000484686 SPATA31A1Q5TZJ5 1347 aa7.1□□□□□ -1.27
CNTN4-216ENST00000484686 RTL1A6NKG5 1358 aa7.1□□□□□ -1.27
CNTN4-216ENST00000484686 CCER2I3L3R5 266 aa7.1□□□□□ -1.27
CNTN4-216ENST00000484686 CARD10Q9BWT7 1032 aa7.1□□□□□ -1.27
CNTN4-216ENST00000484686 VPS72Q15906 364 aa7.09□□□□□ -1.27
CNTN4-216ENST00000484686 ZNF772Q68DY9 489 aaPredicted RBP7.09□□□□□ -1.27
CNTN4-216ENST00000484686 RNF216Q9NWF9 866 aaPredicted RBP7.09□□□□□ -1.27
CNTN4-216ENST00000484686 SPATA31A5Q5VU36 1347 aa7.09□□□□□ -1.27
CNTN4-216ENST00000484686 SPATA31A7Q8IWB4 1347 aa7.09□□□□□ -1.27
CNTN4-216ENST00000484686 IGSF1Q8N6C5 1336 aa7.09□□□□□ -1.27
CNTN4-216ENST00000484686 CRB1P82279 1406 aa7.09□□□□□ -1.27
CNTN4-216ENST00000484686 APAF1O14727 1248 aa7.09□□□□□ -1.27
CNTN4-216ENST00000484686 IL2RBP14784 551 aa7.09□□□□□ -1.27
CNTN4-216ENST00000484686 RSPH6AQ9H0K4 717 aa7.09□□□□□ -1.27
CNTN4-216ENST00000484686 KIF24Q5T7B8 1368 aa7.09□□□□□ -1.27
CNTN4-216ENST00000484686 RGPD2P0DJD1 1756 aa7.09□□□□□ -1.27
CNTN4-216ENST00000484686 COL18A1P39060 1754 aa7.09□□□□□ -1.27
CNTN4-216ENST00000484686 RXRBP28702 533 aa7.09□□□□□ -1.28
CNTN4-216ENST00000484686 HOMEZQ8IX15 550 aa7.09□□□□□ -1.28
CNTN4-216ENST00000484686 COL3A1P02461 1466 aaPredicted RBP7.09□□□□□ -1.28
CNTN4-216ENST00000484686 FCHSD2O94868 740 aa7.08□□□□□ -1.28
CNTN4-216ENST00000484686 TATP17735 454 aaPredicted RBP7.08□□□□□ -1.28
CNTN4-216ENST00000484686 DCTN1Q14203 1278 aa7.08□□□□□ -1.28
CNTN4-216ENST00000484686 MTHFSDQ2M296 383 aaKnown RBP7.08□□□□□ -1.28
CNTN4-216ENST00000484686 CNKSR2Q8WXI2 1034 aa7.08□□□□□ -1.28
CNTN4-216ENST00000484686 COL14A1Q05707 1796 aaKnown RBP7.08□□□□□ -1.28
CNTN4-216ENST00000484686 USP54Q70EL1 1684 aa7.08□□□□□ -1.28
CNTN4-216ENST00000484686 MAPK8IP3Q9UPT6 1336 aa7.08□□□□□ -1.28
CNTN4-216ENST00000484686 NEFMP07197 916 aa7.08□□□□□ -1.28
CNTN4-216ENST00000484686 SEPT12Q8IYM1 358 aa7.08□□□□□ -1.28
CNTN4-216ENST00000484686 CHMP4AQ9BY43 222 aa7.08□□□□□ -1.28
CNTN4-216ENST00000484686 PLCH1Q4KWH8 1693 aa7.08□□□□□ -1.28
CNTN4-216ENST00000484686 LMO7Q8WWI1 1683 aa7.08□□□□□ -1.28
CNTN4-216ENST00000484686 GOLGB1Q14789 3259 aaKnown RBP7.08□□□□□ -1.28
CNTN4-216ENST00000484686 KAT6BQ8WYB5 2073 aa7.08□□□□□ -1.28
CNTN4-216ENST00000484686 EXOC5O00471 708 aa7.07□□□□□ -1.28
CNTN4-216ENST00000484686 HNRNPUQ00839 825 aaKnown RBP eCLIP7.07□□□□□ -1.28
CNTN4-216ENST00000484686 DDB1Q16531 1140 aa7.07□□□□□ -1.28
CNTN4-216ENST00000484686 THUMPD2Q9BTF0 503 aaKnown RBP7.07□□□□□ -1.28
CNTN4-216ENST00000484686 MPRIPQ6WCQ1 1025 aa7.07□□□□□ -1.28
CNTN4-216ENST00000484686 SYTL4Q96C24 671 aaPredicted RBP7.07□□□□□ -1.28
CNTN4-216ENST00000484686 PLEKHF1Q96S99 279 aa7.07□□□□□ -1.28
CNTN4-216ENST00000484686 MEGF6O75095 1541 aa7.07□□□□□ -1.28
CNTN4-216ENST00000484686 RBM6P78332 1123 aaKnown RBP7.07□□□□□ -1.28
CNTN4-216ENST00000484686 PDE3BQ13370 1112 aa7.07□□□□□ -1.28
CNTN4-216ENST00000484686 ZNF530Q6P9A1 599 aaPredicted RBP7.07□□□□□ -1.28
CNTN4-216ENST00000484686 MCM10Q7L590 875 aa7.07□□□□□ -1.28
CNTN4-216ENST00000484686 ZCRB1Q8TBF4 217 aaKnown RBP7.07□□□□□ -1.28
CNTN4-216ENST00000484686 CYP27B1O15528 508 aa7.06□□□□□ -1.28
CNTN4-216ENST00000484686 DEKP35659 375 aaKnown RBP7.06□□□□□ -1.28
CNTN4-216ENST00000484686 RIPK4P57078 832 aa7.06□□□□□ -1.28
CNTN4-216ENST00000484686 RUNDC1Q96C34 613 aa7.06□□□□□ -1.28
CNTN4-216ENST00000484686 ACSBG1Q96GR2 724 aa7.06□□□□□ -1.28
CNTN4-216ENST00000484686 PLEKHO1Q53GL0 409 aaPredicted RBP7.05□□□□□ -1.28
CNTN4-216ENST00000484686 LGR6Q9HBX8 967 aa7.05□□□□□ -1.28
CNTN4-216ENST00000484686 KDRP35968 1356 aa7.05□□□□□ -1.28
CNTN4-216ENST00000484686 TMPOP42166 694 aaKnown RBP7.05□□□□□ -1.28
CNTN4-216ENST00000484686 C1orf141Q5JVX7 400 aa7.05□□□□□ -1.28
CNTN4-216ENST00000484686 SPG7Q9UQ90 795 aa7.05□□□□□ -1.28
CNTN4-216ENST00000484686 CACNB1Q02641 598 aaPredicted RBP7.04□□□□□ -1.28
CNTN4-216ENST00000484686 TAF7LQ5H9L4 462 aa7.04□□□□□ -1.28
CNTN4-216ENST00000484686 BARGINQ6ZT62 677 aa7.04□□□□□ -1.28
CNTN4-216ENST00000484686 PTF1AQ7RTS3 328 aa7.04□□□□□ -1.28
CNTN4-216ENST00000484686 MARCH10Q8NA82 808 aaPredicted RBP7.04□□□□□ -1.28
CNTN4-216ENST00000484686 MIS18AQ9NYP9 233 aa7.04□□□□□ -1.28
CNTN4-216ENST00000484686 THRAP3Q9Y2W1 955 aaKnown RBP7.04□□□□□ -1.28
CNTN4-216ENST00000484686 LAS1LQ9Y4W2 734 aaKnown RBP7.04□□□□□ -1.28
CNTN4-216ENST00000484686 ATRNO75882 1429 aa7.04□□□□□ -1.28
CNTN4-216ENST00000484686 KCNQ2O43526 872 aa7.04□□□□□ -1.28
CNTN4-216ENST00000484686 AAMPQ13685 434 aa7.04□□□□□ -1.28
CNTN4-216ENST00000484686 RTF1Q92541 710 aaKnown RBP7.04□□□□□ -1.28
CNTN4-216ENST00000484686 PNNQ9H307 717 aaKnown RBP7.04□□□□□ -1.28
CNTN4-216ENST00000484686 PHKG2P15735 406 aa7.03□□□□□ -1.28
CNTN4-216ENST00000484686 AMOTQ4VCS5 1084 aa7.03□□□□□ -1.28
CNTN4-216ENST00000484686 TSHZ2Q9NRE2 1034 aa7.03□□□□□ -1.28
CNTN4-216ENST00000484686 NRAPQ86VF7 1730 aa7.03□□□□□ -1.28
CNTN4-216ENST00000484686 GLI3P10071 1580 aa7.03□□□□□ -1.28
CNTN4-216ENST00000484686 GNAT3A8MTJ3 354 aa7.03□□□□□ -1.28
CNTN4-216ENST00000484686 NFE2L2Q16236 605 aa7.03□□□□□ -1.28
CNTN4-216ENST00000484686 PAXIP1Q6ZW49 1069 aaPredicted RBP7.03□□□□□ -1.28
CNTN4-216ENST00000484686 KRT27Q7Z3Y8 459 aa7.03□□□□□ -1.28
CNTN4-216ENST00000484686 NPM2Q86SE8 214 aaKnown RBP7.03□□□□□ -1.28
CNTN4-216ENST00000484686 IFNL2Q8IZJ0 200 aa7.03□□□□□ -1.28
CNTN4-216ENST00000484686 NFATC2IPQ8NCF5 419 aa7.03□□□□□ -1.28
CNTN4-216ENST00000484686 IL17REQ8NFR9 667 aa7.03□□□□□ -1.28
CNTN4-216ENST00000484686 NWD2Q9ULI1 1742 aa7.03□□□□□ -1.28
CNTN4-216ENST00000484686 ONECUT3O60422 494 aaPredicted RBP7.02□□□□□ -1.29
CNTN4-216ENST00000484686 GAS2L2Q8NHY3 880 aa7.02□□□□□ -1.29
CNTN4-216ENST00000484686 PCDH11XQ9BZA7 1347 aa7.02□□□□□ -1.29
CNTN4-216ENST00000484686 PCDH11YQ9BZA8 1340 aa7.02□□□□□ -1.29
CNTN4-216ENST00000484686 UTRNP46939 3433 aa7.02□□□□□ -1.29
CNTN4-216ENST00000484686 PRIM1P49642 420 aaKnown RBP7.02□□□□□ -1.29
CNTN4-216ENST00000484686 ZMYND15Q9H091 742 aa7.02□□□□□ -1.29
CNTN4-216ENST00000484686 TRIM35Q9UPQ4 493 aa7.02□□□□□ -1.29
CNTN4-216ENST00000484686 OVOS2A0A0G2JMS6 1433 aa7.02□□□□□ -1.29
CNTN4-216ENST00000484686 RBM10P98175 930 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms