RNA–Protein interactions for RNA: ENST00000484487.1

PDZRN3-209, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-209ENST00000484487 LTV1Q96GA3 475 aaPredicted RBP8.6□□□□□ -1.03
PDZRN3-209ENST00000484487 NRAPQ86VF7 1730 aa8.6□□□□□ -1.03
PDZRN3-209ENST00000484487 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.6□□□□□ -1.03
PDZRN3-209ENST00000484487 PARP4Q9UKK3 1724 aaKnown RBP8.6□□□□□ -1.03
PDZRN3-209ENST00000484487 ERBB3P21860 1342 aa8.59□□□□□ -1.03
PDZRN3-209ENST00000484487 IGSF1Q8N6C5 1336 aa8.59□□□□□ -1.03
PDZRN3-209ENST00000484487 NUTM2BA6NNL0 878 aaPredicted RBP8.59□□□□□ -1.03
PDZRN3-209ENST00000484487 NUTM2EB1AL46 878 aaPredicted RBP8.59□□□□□ -1.03
PDZRN3-209ENST00000484487 CSB-PGBD3P0DP91 1061 aa8.59□□□□□ -1.03
PDZRN3-209ENST00000484487 HNRNPUQ00839 825 aaKnown RBP eCLIP8.59□□□□□ -1.03
PDZRN3-209ENST00000484487 CHRNA2Q15822 529 aa8.59□□□□□ -1.03
PDZRN3-209ENST00000484487 NUTM2AQ8IVF1 878 aaPredicted RBP8.59□□□□□ -1.03
PDZRN3-209ENST00000484487 KDRP35968 1356 aa8.59□□□□□ -1.03
PDZRN3-209ENST00000484487 WNK3Q9BYP7 1800 aa8.59□□□□□ -1.03
PDZRN3-209ENST00000484487 COL5A2P05997 1499 aaPredicted RBP8.58□□□□□ -1.04
PDZRN3-209ENST00000484487 WDR17Q8IZU2 1322 aa8.58□□□□□ -1.04
PDZRN3-209ENST00000484487 FAM83GA6ND36 823 aa8.58□□□□□ -1.04
PDZRN3-209ENST00000484487 SULT6B1Q6IMI4 303 aa8.58□□□□□ -1.04
PDZRN3-209ENST00000484487 YTHDC1Q96MU7 727 aaKnown RBP8.58□□□□□ -1.04
PDZRN3-209ENST00000484487 EYA1Q99502 592 aa8.58□□□□□ -1.04
PDZRN3-209ENST00000484487 AXIN2Q9Y2T1 843 aa8.58□□□□□ -1.04
PDZRN3-209ENST00000484487 PLEKHG2Q9H7P9 1386 aa8.58□□□□□ -1.04
PDZRN3-209ENST00000484487 NCAPD2Q15021 1401 aa8.57□□□□□ -1.04
PDZRN3-209ENST00000484487 ADAMTS2O95450 1211 aa8.57□□□□□ -1.04
PDZRN3-209ENST00000484487 HMOX1P09601 288 aa8.57□□□□□ -1.04
PDZRN3-209ENST00000484487 PRKAR2BP31323 418 aa8.57□□□□□ -1.04
PDZRN3-209ENST00000484487 RSPH6AQ9H0K4 717 aa8.57□□□□□ -1.04
PDZRN3-209ENST00000484487 NLRP2Q9NX02 1062 aa8.57□□□□□ -1.04
PDZRN3-209ENST00000484487 BTG4Q9NY30 223 aa8.57□□□□□ -1.04
PDZRN3-209ENST00000484487 CRB1P82279 1406 aa8.56□□□□□ -1.04
PDZRN3-209ENST00000484487 MEX3CQ5U5Q3 659 aaKnown RBP8.56□□□□□ -1.04
PDZRN3-209ENST00000484487 NBPF6Q5VWK0 638 aa8.56□□□□□ -1.04
PDZRN3-209ENST00000484487 TOM1L2Q6ZVM7 507 aa8.56□□□□□ -1.04
PDZRN3-209ENST00000484487 CCDC146Q8IYE0 955 aa8.56□□□□□ -1.04
PDZRN3-209ENST00000484487 NGLY1Q96IV0 654 aa8.56□□□□□ -1.04
PDZRN3-209ENST00000484487 NBPF4Q96M43 638 aa8.56□□□□□ -1.04
PDZRN3-209ENST00000484487 PLEKHF1Q96S99 279 aa8.56□□□□□ -1.04
PDZRN3-209ENST00000484487 CARD10Q9BWT7 1032 aa8.56□□□□□ -1.04
PDZRN3-209ENST00000484487 PKD1L3Q7Z443 1732 aa8.56□□□□□ -1.04
PDZRN3-209ENST00000484487 ZBED9Q6R2W3 1325 aa8.55□□□□□ -1.04
PDZRN3-209ENST00000484487 SLIT2O94813 1529 aa8.55□□□□□ -1.04
PDZRN3-209ENST00000484487 APAF1O14727 1248 aa8.55□□□□□ -1.04
PDZRN3-209ENST00000484487 LMOD3Q0VAK6 560 aa8.55□□□□□ -1.04
PDZRN3-209ENST00000484487 AMOTQ4VCS5 1084 aa8.55□□□□□ -1.04
PDZRN3-209ENST00000484487 TCP11L2Q8N4U5 519 aa8.55□□□□□ -1.04
PDZRN3-209ENST00000484487 RAPGEF4Q8WZA2 1011 aa8.55□□□□□ -1.04
PDZRN3-209ENST00000484487 STRN4Q9NRL3 753 aa8.55□□□□□ -1.04
PDZRN3-209ENST00000484487 FBXO3Q9UK99 471 aa8.55□□□□□ -1.04
PDZRN3-209ENST00000484487 TATP17735 454 aaPredicted RBP8.54□□□□□ -1.04
PDZRN3-209ENST00000484487 NFE2L2Q16236 605 aa8.54□□□□□ -1.04
PDZRN3-209ENST00000484487 CCDC27Q2M243 656 aa8.54□□□□□ -1.04
PDZRN3-209ENST00000484487 PLEKHO1Q53GL0 409 aaPredicted RBP8.54□□□□□ -1.04
PDZRN3-209ENST00000484487 AEBP1Q8IUX7 1158 aa8.54□□□□□ -1.04
PDZRN3-209ENST00000484487 ZNF579Q8NAF0 562 aaKnown RBP8.54□□□□□ -1.04
PDZRN3-209ENST00000484487 GAS2L2Q8NHY3 880 aa8.54□□□□□ -1.04
PDZRN3-209ENST00000484487 TSPYL2Q9H2G4 693 aaPredicted RBP8.54□□□□□ -1.04
PDZRN3-209ENST00000484487 LRP6O75581 1613 aa8.54□□□□□ -1.04
PDZRN3-209ENST00000484487 KAT6BQ8WYB5 2073 aa8.53□□□□□ -1.04
PDZRN3-209ENST00000484487 SCN11AQ9UI33 1791 aa8.53□□□□□ -1.04
PDZRN3-209ENST00000484487 CENPBP07199 599 aaPredicted RBP8.53□□□□□ -1.04
PDZRN3-209ENST00000484487 TMPOP42166 694 aaKnown RBP8.53□□□□□ -1.04
PDZRN3-209ENST00000484487 CALD1Q05682 793 aaKnown RBP8.53□□□□□ -1.04
PDZRN3-209ENST00000484487 PDE3BQ13370 1112 aa8.53□□□□□ -1.04
PDZRN3-209ENST00000484487 UNC5CLQ8IV45 518 aa8.53□□□□□ -1.04
PDZRN3-209ENST00000484487 FNBP4Q8N3X1 1017 aaPredicted RBP8.53□□□□□ -1.04
PDZRN3-209ENST00000484487 C8orf37Q96NL8 207 aa8.53□□□□□ -1.04
PDZRN3-209ENST00000484487 CDCA7Q9BWT1 371 aaPredicted RBP8.53□□□□□ -1.04
PDZRN3-209ENST00000484487 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.53□□□□□ -1.04
PDZRN3-209ENST00000484487 SPG7Q9UQ90 795 aa8.53□□□□□ -1.04
PDZRN3-209ENST00000484487 THRAP3Q9Y2W1 955 aaKnown RBP8.53□□□□□ -1.04
PDZRN3-209ENST00000484487 HTATSF1O43719 755 aaKnown RBP8.52□□□□□ -1.05
PDZRN3-209ENST00000484487 RIPK4P57078 832 aa8.52□□□□□ -1.05
PDZRN3-209ENST00000484487 LARP1Q6PKG0 1096 aaKnown RBP8.52□□□□□ -1.05
PDZRN3-209ENST00000484487 USHBP1Q8N6Y0 703 aa8.52□□□□□ -1.05
PDZRN3-209ENST00000484487 PHACTR3Q96KR7 559 aa8.52□□□□□ -1.05
PDZRN3-209ENST00000484487 PHF12Q96QT6 1004 aa8.52□□□□□ -1.05
PDZRN3-209ENST00000484487 SHANK3Q9BYB0 1731 aa8.51□□□□□ -1.05
PDZRN3-209ENST00000484487 IL2RBP14784 551 aa8.51□□□□□ -1.05
PDZRN3-209ENST00000484487 NEUROD2Q15784 382 aa8.51□□□□□ -1.05
PDZRN3-209ENST00000484487 VPS72Q15906 364 aa8.51□□□□□ -1.05
PDZRN3-209ENST00000484487 WDR63Q8IWG1 891 aa8.51□□□□□ -1.05
PDZRN3-209ENST00000484487 RTF1Q92541 710 aaKnown RBP8.51□□□□□ -1.05
PDZRN3-209ENST00000484487 USP21Q9UK80 565 aa8.51□□□□□ -1.05
PDZRN3-209ENST00000484487 SALL2Q9Y467 1007 aaPredicted RBP8.51□□□□□ -1.05
PDZRN3-209ENST00000484487 SPATA31A1Q5TZJ5 1347 aa8.51□□□□□ -1.05
PDZRN3-209ENST00000484487 BCL9LQ86UU0 1499 aa8.51□□□□□ -1.05
PDZRN3-209ENST00000484487 OVOS2A0A0G2JMS6 1433 aa8.5□□□□□ -1.05
PDZRN3-209ENST00000484487 GNAT3A8MTJ3 354 aa8.5□□□□□ -1.05
PDZRN3-209ENST00000484487 CLCN6P51797 869 aa8.5□□□□□ -1.05
PDZRN3-209ENST00000484487 GOLGA2Q08379 1002 aa8.5□□□□□ -1.05
PDZRN3-209ENST00000484487 MTHFSDQ2M296 383 aaKnown RBP8.5□□□□□ -1.05
PDZRN3-209ENST00000484487 C1orf141Q5JVX7 400 aa8.5□□□□□ -1.05
PDZRN3-209ENST00000484487 WWC1Q8IX03 1113 aa8.5□□□□□ -1.05
PDZRN3-209ENST00000484487 RRP7AQ9Y3A4 280 aaKnown RBP8.5□□□□□ -1.05
PDZRN3-209ENST00000484487 CCDC9Q9Y3X0 531 aaKnown RBP8.5□□□□□ -1.05
PDZRN3-209ENST00000484487 SPATA31A5Q5VU36 1347 aa8.5□□□□□ -1.05
PDZRN3-209ENST00000484487 SPATA31A7Q8IWB4 1347 aa8.5□□□□□ -1.05
PDZRN3-209ENST00000484487 ADAMTS7Q9UKP4 1686 aa8.49□□□□□ -1.05
PDZRN3-209ENST00000484487 MEGF6O75095 1541 aa8.49□□□□□ -1.05
PDZRN3-209ENST00000484487 MAP3K5Q99683 1374 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms