RNA–Protein interactions for RNA: ENST00000484372.1

SNRNP200-206, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 581 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-206ENST00000484372 HSP90AB2PQ58FF8 381 aa16.48■□□□□ 0.23
SNRNP200-206ENST00000484372 SLC27A3Q5K4L6 730 aa16.48■□□□□ 0.23
SNRNP200-206ENST00000484372 PPM1GO15355 546 aaPredicted RBP16.47■□□□□ 0.23
SNRNP200-206ENST00000484372 ZBTB7AO95365 584 aa16.46■□□□□ 0.23
SNRNP200-206ENST00000484372 PRIM1P49642 420 aaKnown RBP16.46■□□□□ 0.23
SNRNP200-206ENST00000484372 USHBP1Q8N6Y0 703 aa16.46■□□□□ 0.23
SNRNP200-206ENST00000484372 HMGB2P26583 209 aaKnown RBP16.45■□□□□ 0.22
SNRNP200-206ENST00000484372 MTFR1LQ9H019 292 aa16.45■□□□□ 0.22
SNRNP200-206ENST00000484372 BTAF1O14981 1849 aa16.45■□□□□ 0.22
SNRNP200-206ENST00000484372 MEGF6O75095 1541 aa16.45■□□□□ 0.22
SNRNP200-206ENST00000484372 HSPA5P11021 654 aaKnown RBP16.44■□□□□ 0.22
SNRNP200-206ENST00000484372 ATF5Q9Y2D1 282 aaPredicted RBP16.44■□□□□ 0.22
SNRNP200-206ENST00000484372 EMILIN1Q9Y6C2 1016 aa16.44■□□□□ 0.22
SNRNP200-206ENST00000484372 PCDH11XQ9BZA7 1347 aa16.44■□□□□ 0.22
SNRNP200-206ENST00000484372 PCDH11YQ9BZA8 1340 aa16.44■□□□□ 0.22
SNRNP200-206ENST00000484372 MYOM1P52179 1685 aa16.43■□□□□ 0.22
SNRNP200-206ENST00000484372 RGPD2P0DJD1 1756 aa16.42■□□□□ 0.22
SNRNP200-206ENST00000484372 PDGFDQ9GZP0 370 aaPredicted RBP16.42■□□□□ 0.22
SNRNP200-206ENST00000484372 WASHC2AQ641Q2 1341 aa16.42■□□□□ 0.22
SNRNP200-206ENST00000484372 CASZ1Q86V15 1759 aa16.41■□□□□ 0.22
SNRNP200-206ENST00000484372 LRRC4BQ9NT99 713 aa16.41■□□□□ 0.22
SNRNP200-206ENST00000484372 SPG7Q9UQ90 795 aa16.4■□□□□ 0.22
SNRNP200-206ENST00000484372 SLC16A10Q8TF71 515 aa16.39■□□□□ 0.21
SNRNP200-206ENST00000484372 PANK3Q9H999 370 aa16.39■□□□□ 0.21
SNRNP200-206ENST00000484372 TFCP2L1Q9NZI6 479 aa16.39■□□□□ 0.21
SNRNP200-206ENST00000484372 CCNL1Q9UK58 526 aaPredicted RBP16.39■□□□□ 0.21
SNRNP200-206ENST00000484372 PTGER2P43116 358 aa16.38■□□□□ 0.21
SNRNP200-206ENST00000484372 TNNT2P45379 298 aaPredicted RBP16.38■□□□□ 0.21
SNRNP200-206ENST00000484372 ZNF827Q17R98 1081 aa16.38■□□□□ 0.21
SNRNP200-206ENST00000484372 AKT1S1Q96B36 256 aa16.38■□□□□ 0.21
SNRNP200-206ENST00000484372 POLKQ9UBT6 870 aa16.38■□□□□ 0.21
SNRNP200-206ENST00000484372 DOT1LQ8TEK3 1739 aa16.38■□□□□ 0.21
SNRNP200-206ENST00000484372 NSD2O96028 1365 aa16.37■□□□□ 0.21
SNRNP200-206ENST00000484372 POLD1P28340 1107 aa16.36■□□□□ 0.21
SNRNP200-206ENST00000484372 MPRIPQ6WCQ1 1025 aa16.36■□□□□ 0.21
SNRNP200-206ENST00000484372 ARXQ96QS3 562 aa16.36■□□□□ 0.21
SNRNP200-206ENST00000484372 EYA1Q99502 592 aa16.36■□□□□ 0.21
SNRNP200-206ENST00000484372 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.36■□□□□ 0.21
SNRNP200-206ENST00000484372 PAPPAQ13219 1627 aa16.36■□□□□ 0.21
SNRNP200-206ENST00000484372 CYP27B1O15528 508 aa16.35■□□□□ 0.21
SNRNP200-206ENST00000484372 SMARCC1Q92922 1105 aaPredicted RBP16.35■□□□□ 0.21
SNRNP200-206ENST00000484372 KNSTRNQ9Y448 316 aa16.35■□□□□ 0.21
SNRNP200-206ENST00000484372 SHANK3Q9BYB0 1731 aa16.35■□□□□ 0.21
SNRNP200-206ENST00000484372 MAP2P11137 1827 aaKnown RBP16.35■□□□□ 0.21
SNRNP200-206ENST00000484372 MORC1Q86VD1 984 aa16.34■□□□□ 0.21
SNRNP200-206ENST00000484372 FHDC1Q9C0D6 1143 aaPredicted RBP16.34■□□□□ 0.21
SNRNP200-206ENST00000484372 MSH5O43196 834 aa16.33■□□□□ 0.2
SNRNP200-206ENST00000484372 YY1P25490 414 aa16.33■□□□□ 0.2
SNRNP200-206ENST00000484372 KCNQ4P56696 695 aa16.33■□□□□ 0.2
SNRNP200-206ENST00000484372 SYT17Q9BSW7 474 aa16.33■□□□□ 0.2
SNRNP200-206ENST00000484372 EIF4A2Q14240 407 aaKnown RBP16.32■□□□□ 0.2
SNRNP200-206ENST00000484372 NCAPD2Q15021 1401 aa16.32■□□□□ 0.2
SNRNP200-206ENST00000484372 NKX1-1Q15270 411 aaPredicted RBP16.32■□□□□ 0.2
SNRNP200-206ENST00000484372 PNPLA7Q6ZV29 1317 aa16.32■□□□□ 0.2
SNRNP200-206ENST00000484372 IFNL2Q8IZJ0 200 aa16.32■□□□□ 0.2
SNRNP200-206ENST00000484372 SGIP1Q9BQI5 828 aa16.32■□□□□ 0.2
SNRNP200-206ENST00000484372 ANKRD26Q9UPS8 1709 aa16.32■□□□□ 0.2
SNRNP200-206ENST00000484372 PALLDQ8WX93 1383 aa16.31■□□□□ 0.2
SNRNP200-206ENST00000484372 FLAD1Q8NFF5 587 aa16.31■□□□□ 0.2
SNRNP200-206ENST00000484372 LY75O60449 1722 aa16.31■□□□□ 0.2
SNRNP200-206ENST00000484372 PLEKHG2Q9H7P9 1386 aa16.3■□□□□ 0.2
SNRNP200-206ENST00000484372 TMOD3Q9NYL9 352 aa16.3■□□□□ 0.2
SNRNP200-206ENST00000484372 QSER1Q2KHR3 1735 aa16.28■□□□□ 0.2
SNRNP200-206ENST00000484372 PKD1L3Q7Z443 1732 aa16.28■□□□□ 0.2
SNRNP200-206ENST00000484372 HSP90AB1P08238 724 aaKnown RBP16.28■□□□□ 0.2
SNRNP200-206ENST00000484372 PHKG2P15735 406 aa16.28■□□□□ 0.2
SNRNP200-206ENST00000484372 PLEKHO1Q53GL0 409 aaPredicted RBP16.28■□□□□ 0.2
SNRNP200-206ENST00000484372 KLHL34Q8N239 644 aa16.28■□□□□ 0.2
SNRNP200-206ENST00000484372 PIGBQ92521 554 aa16.28■□□□□ 0.2
SNRNP200-206ENST00000484372 MAP3K5Q99683 1374 aa16.27■□□□□ 0.2
SNRNP200-206ENST00000484372 IGSF1Q8N6C5 1336 aa16.27■□□□□ 0.2
SNRNP200-206ENST00000484372 AK7Q96M32 723 aa16.27■□□□□ 0.2
SNRNP200-206ENST00000484372 AMOTQ4VCS5 1084 aa16.26■□□□□ 0.19
SNRNP200-206ENST00000484372 COL23A1Q86Y22 540 aaPredicted RBP16.26■□□□□ 0.19
SNRNP200-206ENST00000484372 KIF7Q2M1P5 1343 aa16.24■□□□□ 0.19
SNRNP200-206ENST00000484372 LOC102724428A0A0B4J2F2 783 aa16.24■□□□□ 0.19
SNRNP200-206ENST00000484372 SIK1P57059 783 aa16.24■□□□□ 0.19
SNRNP200-206ENST00000484372 ERVV-2B6SEH9 535 aa16.23■□□□□ 0.19
SNRNP200-206ENST00000484372 GPR162Q16538 588 aa16.23■□□□□ 0.19
SNRNP200-206ENST00000484372 C1orf141Q5JVX7 400 aa16.23■□□□□ 0.19
SNRNP200-206ENST00000484372 DCAF5Q96JK2 942 aa16.23■□□□□ 0.19
SNRNP200-206ENST00000484372 ITGB4P16144 1822 aa16.23■□□□□ 0.19
SNRNP200-206ENST00000484372 ATP6V1AP38606 617 aa16.22■□□□□ 0.19
SNRNP200-206ENST00000484372 ZNF530Q6P9A1 599 aaPredicted RBP16.22■□□□□ 0.19
SNRNP200-206ENST00000484372 C5P01031 1676 aa16.21■□□□□ 0.19
SNRNP200-206ENST00000484372 AMER1Q5JTC6 1135 aaPredicted RBP16.21■□□□□ 0.19
SNRNP200-206ENST00000484372 ASAP1Q9ULH1 1129 aa16.21■□□□□ 0.19
SNRNP200-206ENST00000484372 TOGARAM1Q9Y4F4 1720 aa16.21■□□□□ 0.19
SNRNP200-206ENST00000484372 TUBGCP6Q96RT7 1819 aa16.2■□□□□ 0.18
SNRNP200-206ENST00000484372 SSFA2P28290 1259 aa16.2■□□□□ 0.18
SNRNP200-206ENST00000484372 MTHFSP49914 203 aa16.2■□□□□ 0.18
SNRNP200-206ENST00000484372 CABP4P57796 275 aa16.2■□□□□ 0.18
SNRNP200-206ENST00000484372 MSL1Q68DK7 614 aa16.2■□□□□ 0.18
SNRNP200-206ENST00000484372 SULT6B1Q6IMI4 303 aa16.2■□□□□ 0.18
SNRNP200-206ENST00000484372 PELP1Q8IZL8 1130 aaKnown RBP16.2■□□□□ 0.18
SNRNP200-206ENST00000484372 PHF14O94880 888 aa16.19■□□□□ 0.18
SNRNP200-206ENST00000484372 ATG3Q9NT62 314 aa16.19■□□□□ 0.18
SNRNP200-206ENST00000484372 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.18■□□□□ 0.18
SNRNP200-206ENST00000484372 IL13P35225 146 aa16.18■□□□□ 0.18
SNRNP200-206ENST00000484372 C4BP0C0L5 1744 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms