RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 TJAP1Q5JTD0 557 aa9.41□□□□□ -0.9
SEMA3D-204ENST00000484038 BEGAINQ9BUH8 593 aa9.41□□□□□ -0.9
SEMA3D-204ENST00000484038 KANK1Q14678 1352 aa9.41□□□□□ -0.9
SEMA3D-204ENST00000484038 MAP3K1Q13233 1512 aa9.41□□□□□ -0.9
SEMA3D-204ENST00000484038 KDM5AP29375 1690 aaKnown RBP9.41□□□□□ -0.9
SEMA3D-204ENST00000484038 ATP6V1AP38606 617 aa9.41□□□□□ -0.9
SEMA3D-204ENST00000484038 SLC26A8Q96RN1 970 aa9.41□□□□□ -0.9
SEMA3D-204ENST00000484038 PTPN23Q9H3S7 1636 aa9.4□□□□□ -0.9
SEMA3D-204ENST00000484038 NR1I2O75469 434 aa9.4□□□□□ -0.91
SEMA3D-204ENST00000484038 POTEAQ6S8J7 498 aa9.4□□□□□ -0.91
SEMA3D-204ENST00000484038 ZNF516Q92618 1163 aa9.4□□□□□ -0.91
SEMA3D-204ENST00000484038 SETD1AO15047 1707 aaKnown RBP9.39□□□□□ -0.91
SEMA3D-204ENST00000484038 PROSER2Q86WR7 435 aaPredicted RBP9.39□□□□□ -0.91
SEMA3D-204ENST00000484038 ABCC5O15440 1437 aa9.39□□□□□ -0.91
SEMA3D-204ENST00000484038 ADGRB3O60242 1522 aa9.39□□□□□ -0.91
SEMA3D-204ENST00000484038 TET3O43151 1660 aa9.38□□□□□ -0.91
SEMA3D-204ENST00000484038 PHLPP1O60346 1717 aa9.38□□□□□ -0.91
SEMA3D-204ENST00000484038 ZPR1O75312 459 aa9.38□□□□□ -0.91
SEMA3D-204ENST00000484038 KCNA6P17658 529 aa9.38□□□□□ -0.91
SEMA3D-204ENST00000484038 NKTRP30414 1462 aaKnown RBP9.38□□□□□ -0.91
SEMA3D-204ENST00000484038 DAPK1P53355 1430 aa9.38□□□□□ -0.91
SEMA3D-204ENST00000484038 IDI1Q13907 227 aa9.38□□□□□ -0.91
SEMA3D-204ENST00000484038 NWD1Q149M9 1564 aa9.38□□□□□ -0.91
SEMA3D-204ENST00000484038 KDM4CQ9H3R0 1056 aa9.38□□□□□ -0.91
SEMA3D-204ENST00000484038 MSH6P52701 1360 aa9.37□□□□□ -0.91
SEMA3D-204ENST00000484038 TLL1O43897 1013 aa9.37□□□□□ -0.91
SEMA3D-204ENST00000484038 USP46P62068 366 aa9.37□□□□□ -0.91
SEMA3D-204ENST00000484038 LMTK2Q8IWU2 1503 aa9.37□□□□□ -0.91
SEMA3D-204ENST00000484038 MORN1Q5T089 497 aa9.36□□□□□ -0.91
SEMA3D-204ENST00000484038 CHIC2Q9UKJ5 165 aa9.36□□□□□ -0.91
SEMA3D-204ENST00000484038 ANKRD30AQ9BXX3 1397 aa9.36□□□□□ -0.91
SEMA3D-204ENST00000484038 HOXA2O43364 376 aa9.36□□□□□ -0.91
SEMA3D-204ENST00000484038 HLA-CQ95604 372 aa9.36□□□□□ -0.91
SEMA3D-204ENST00000484038 LOC105371045A0A1W2PR82 267 aa9.35□□□□□ -0.91
SEMA3D-204ENST00000484038 SCUBE3Q8IX30 993 aa9.35□□□□□ -0.91
SEMA3D-204ENST00000484038 SPIRE2Q8WWL2 714 aa9.35□□□□□ -0.91
SEMA3D-204ENST00000484038 SLC27A5Q9Y2P5 690 aa9.35□□□□□ -0.91
SEMA3D-204ENST00000484038 NOS1P29475 1434 aa9.34□□□□□ -0.91
SEMA3D-204ENST00000484038 FGD6Q6ZV73 1430 aa9.34□□□□□ -0.91
SEMA3D-204ENST00000484038 JCADQ9P266 1359 aa9.34□□□□□ -0.91
SEMA3D-204ENST00000484038 GUCA2AQ02747 115 aa9.34□□□□□ -0.91
SEMA3D-204ENST00000484038 NKX2-3Q8TAU0 364 aa9.34□□□□□ -0.91
SEMA3D-204ENST00000484038 TBC1D2Q9BYX2 928 aa9.34□□□□□ -0.91
SEMA3D-204ENST00000484038 SLAIN2Q9P270 581 aa9.34□□□□□ -0.91
SEMA3D-204ENST00000484038 GCC2Q8IWJ2 1684 aa9.34□□□□□ -0.91
SEMA3D-204ENST00000484038 PPP1R15AO75807 674 aaPredicted RBP9.33□□□□□ -0.92
SEMA3D-204ENST00000484038 DIXDC1Q155Q3 683 aa9.33□□□□□ -0.92
SEMA3D-204ENST00000484038 COL16A1Q07092 1604 aaPredicted RBP9.33□□□□□ -0.92
SEMA3D-204ENST00000484038 MYO5BQ9ULV0 1848 aa9.33□□□□□ -0.92
SEMA3D-204ENST00000484038 IFFO2Q5TF58 517 aa9.32□□□□□ -0.92
SEMA3D-204ENST00000484038 MEX3CQ5U5Q3 659 aaKnown RBP9.32□□□□□ -0.92
SEMA3D-204ENST00000484038 C14orf37Q86TY3 774 aa9.32□□□□□ -0.92
SEMA3D-204ENST00000484038 SLC52A1Q9NWF4 448 aa9.32□□□□□ -0.92
SEMA3D-204ENST00000484038 CHD2O14647 1828 aaKnown RBP9.32□□□□□ -0.92
SEMA3D-204ENST00000484038 FMNL1O95466 1100 aaPredicted RBP9.31□□□□□ -0.92
SEMA3D-204ENST00000484038 NDUFV2P19404 249 aa9.31□□□□□ -0.92
SEMA3D-204ENST00000484038 BRPF1P55201 1214 aaPredicted RBP9.31□□□□□ -0.92
SEMA3D-204ENST00000484038 Q3C1V9 767 aa9.31□□□□□ -0.92
SEMA3D-204ENST00000484038 SPSB2Q99619 263 aa9.31□□□□□ -0.92
SEMA3D-204ENST00000484038 ZFYVE9O95405 1425 aa9.31□□□□□ -0.92
SEMA3D-204ENST00000484038 PLEKHG1Q9ULL1 1385 aa9.31□□□□□ -0.92
SEMA3D-204ENST00000484038 LRP6O75581 1613 aa9.31□□□□□ -0.92
SEMA3D-204ENST00000484038 RPRD2Q5VT52 1461 aaKnown RBP9.31□□□□□ -0.92
SEMA3D-204ENST00000484038 RIMS2Q9UQ26 1411 aa9.31□□□□□ -0.92
SEMA3D-204ENST00000484038 MOXD2PA6NHM9 499 aa9.31□□□□□ -0.92
SEMA3D-204ENST00000484038 FDX1P10109 184 aa9.31□□□□□ -0.92
SEMA3D-204ENST00000484038 DDRGK1Q96HY6 314 aa9.31□□□□□ -0.92
SEMA3D-204ENST00000484038 FAM117AQ9C073 453 aa9.31□□□□□ -0.92
SEMA3D-204ENST00000484038 TMEM131LA2VDJ0 1609 aa9.3□□□□□ -0.92
SEMA3D-204ENST00000484038 A0A0G2JS52 829 aa9.3□□□□□ -0.92
SEMA3D-204ENST00000484038 ADH1BP00325 375 aa9.3□□□□□ -0.92
SEMA3D-204ENST00000484038 GGCXP38435 758 aa9.3□□□□□ -0.92
SEMA3D-204ENST00000484038 RNF19BQ6ZMZ0 732 aa9.3□□□□□ -0.92
SEMA3D-204ENST00000484038 TRIM52Q96A61 297 aa9.3□□□□□ -0.92
SEMA3D-204ENST00000484038 CSPP1Q1MSJ5 1256 aa9.29□□□□□ -0.92
SEMA3D-204ENST00000484038 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.29□□□□□ -0.92
SEMA3D-204ENST00000484038 ADGRL2O95490 1459 aa9.29□□□□□ -0.92
SEMA3D-204ENST00000484038 SPATA31A6Q5VVP1 1343 aa9.28□□□□□ -0.92
SEMA3D-204ENST00000484038 ANKRD50Q9ULJ7 1429 aa9.28□□□□□ -0.92
SEMA3D-204ENST00000484038 C6orf229H3BNL8 230 aa9.28□□□□□ -0.92
SEMA3D-204ENST00000484038 NUTM2DQ5VT03 806 aaPredicted RBP9.28□□□□□ -0.92
SEMA3D-204ENST00000484038 SHPRHQ149N8 1683 aa9.28□□□□□ -0.92
SEMA3D-204ENST00000484038 AHDC1Q5TGY3 1603 aaPredicted RBP9.28□□□□□ -0.92
SEMA3D-204ENST00000484038 DIP2AQ14689 1571 aa9.27□□□□□ -0.93
SEMA3D-204ENST00000484038 S1PR4O95977 384 aa9.27□□□□□ -0.93
SEMA3D-204ENST00000484038 ATF3P18847 181 aa9.27□□□□□ -0.93
SEMA3D-204ENST00000484038 FAM50AQ14320 339 aaKnown RBP9.27□□□□□ -0.93
SEMA3D-204ENST00000484038 ZNF772Q68DY9 489 aaPredicted RBP9.27□□□□□ -0.93
SEMA3D-204ENST00000484038 PPP1R18Q6NYC8 613 aa9.27□□□□□ -0.93
SEMA3D-204ENST00000484038 SLC6A16Q9GZN6 736 aa9.27□□□□□ -0.93
SEMA3D-204ENST00000484038 MYSM1Q5VVJ2 828 aa9.26□□□□□ -0.93
SEMA3D-204ENST00000484038 RIC3Q7Z5B4 369 aa9.26□□□□□ -0.93
SEMA3D-204ENST00000484038 SYMPKQ92797 1274 aaKnown RBP9.26□□□□□ -0.93
SEMA3D-204ENST00000484038 RSPH6AQ9H0K4 717 aa9.26□□□□□ -0.93
SEMA3D-204ENST00000484038 TBX22Q9Y458 520 aa9.26□□□□□ -0.93
SEMA3D-204ENST00000484038 NCOA3Q9Y6Q9 1424 aa9.26□□□□□ -0.93
SEMA3D-204ENST00000484038 NUTM2BA6NNL0 878 aaPredicted RBP9.26□□□□□ -0.93
SEMA3D-204ENST00000484038 NUTM2EB1AL46 878 aaPredicted RBP9.26□□□□□ -0.93
SEMA3D-204ENST00000484038 RSBN1LQ6PCB5 846 aaPredicted RBP9.26□□□□□ -0.93
SEMA3D-204ENST00000484038 BRICD5Q6PL45 260 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms