RNA–Protein interactions for RNA: ENST00000484023.1

ATP13A3-207, Transcript of ATPase 13A3, humanhuman

TSL 2

Gene ATP13A3, Length 522 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-207ENST00000484023 RELBQ01201 579 aa10.78□□□□□ -0.68
ATP13A3-207ENST00000484023 NCOA4Q13772 614 aa10.78□□□□□ -0.68
ATP13A3-207ENST00000484023 C6orf118Q5T5N4 469 aa10.78□□□□□ -0.68
ATP13A3-207ENST00000484023 LINC00528Q8N1L1 170 aa10.78□□□□□ -0.68
ATP13A3-207ENST00000484023 PPP1R12CQ9BZL4 782 aa10.78□□□□□ -0.68
ATP13A3-207ENST00000484023 GMPR2Q9P2T1 348 aaKnown RBP10.78□□□□□ -0.68
ATP13A3-207ENST00000484023 ZFP42Q96MM3 310 aa10.77□□□□□ -0.69
ATP13A3-207ENST00000484023 ZNF395Q9H8N7 513 aaPredicted RBP10.77□□□□□ -0.69
ATP13A3-207ENST00000484023 USP4Q13107 963 aa10.76□□□□□ -0.69
ATP13A3-207ENST00000484023 USP17L3A6NCW0 530 aa10.75□□□□□ -0.69
ATP13A3-207ENST00000484023 USP17L4A6NCW7 530 aa10.75□□□□□ -0.69
ATP13A3-207ENST00000484023 STAU1O95793 577 aaKnown RBP10.75□□□□□ -0.69
ATP13A3-207ENST00000484023 MYCP01106 439 aaPredicted RBP10.75□□□□□ -0.69
ATP13A3-207ENST00000484023 BMP2P12643 396 aa10.75□□□□□ -0.69
ATP13A3-207ENST00000484023 EML3Q32P44 896 aa10.75□□□□□ -0.69
ATP13A3-207ENST00000484023 USP17L2Q6R6M4 530 aa10.75□□□□□ -0.69
ATP13A3-207ENST00000484023 USP17L1Q7RTZ2 530 aa10.75□□□□□ -0.69
ATP13A3-207ENST00000484023 TSEN34Q9BSV6 310 aaKnown RBP10.75□□□□□ -0.69
ATP13A3-207ENST00000484023 MAFBQ9Y5Q3 323 aaPredicted RBP10.75□□□□□ -0.69
ATP13A3-207ENST00000484023 ATP5J2-PTCD1G3V325 749 aa10.74□□□□□ -0.69
ATP13A3-207ENST00000484023 ESF1Q9H501 851 aaKnown RBP10.74□□□□□ -0.69
ATP13A3-207ENST00000484023 UPP2O95045 317 aa10.73□□□□□ -0.69
ATP13A3-207ENST00000484023 PTGIRP43119 386 aa10.73□□□□□ -0.69
ATP13A3-207ENST00000484023 SCARF1Q14162 830 aa10.73□□□□□ -0.69
ATP13A3-207ENST00000484023 CFAP70Q5T0N1 1121 aa10.73□□□□□ -0.69
ATP13A3-207ENST00000484023 PLEKHM2Q8IWE5 1019 aa10.73□□□□□ -0.69
ATP13A3-207ENST00000484023 RAB6BQ9NRW1 208 aa10.73□□□□□ -0.69
ATP13A3-207ENST00000484023 LMOD1P29536 600 aaPredicted RBP10.72□□□□□ -0.69
ATP13A3-207ENST00000484023 CYP2U1Q7Z449 544 aa10.72□□□□□ -0.69
ATP13A3-207ENST00000484023 TRIM52Q96A61 297 aa10.72□□□□□ -0.69
ATP13A3-207ENST00000484023 RFX1P22670 979 aa10.71□□□□□ -0.69
ATP13A3-207ENST00000484023 CCDC82Q8N4S0 544 aa10.71□□□□□ -0.69
ATP13A3-207ENST00000484023 INSM2Q96T92 566 aaPredicted RBP10.71□□□□□ -0.69
ATP13A3-207ENST00000484023 ARHGEF10LQ9HCE6 1279 aa10.71□□□□□ -0.69
ATP13A3-207ENST00000484023 A0A1W2PRU2 124 aa10.7□□□□□ -0.7
ATP13A3-207ENST00000484023 SPINT1O43278 529 aa10.7□□□□□ -0.7
ATP13A3-207ENST00000484023 LZTS3O60299 673 aaPredicted RBP10.7□□□□□ -0.7
ATP13A3-207ENST00000484023 SNRPBP14678 240 aaKnown RBP10.7□□□□□ -0.7
ATP13A3-207ENST00000484023 CTSOP43234 321 aaPredicted RBP10.7□□□□□ -0.7
ATP13A3-207ENST00000484023 SIRT1Q96EB6 747 aa10.7□□□□□ -0.7
ATP13A3-207ENST00000484023 NOD1Q9Y239 953 aa10.7□□□□□ -0.7
ATP13A3-207ENST00000484023 PCDHGA11Q9Y5H2 935 aa10.7□□□□□ -0.7
ATP13A3-207ENST00000484023 GTF2IP78347 998 aa10.69□□□□□ -0.7
ATP13A3-207ENST00000484023 MKRN1Q9UHC7 482 aaKnown RBP10.69□□□□□ -0.7
ATP13A3-207ENST00000484023 SOBPA7XYQ1 873 aa10.68□□□□□ -0.7
ATP13A3-207ENST00000484023 MEN1O00255 615 aa10.68□□□□□ -0.7
ATP13A3-207ENST00000484023 CCDC97Q96F63 343 aaPredicted RBP10.68□□□□□ -0.7
ATP13A3-207ENST00000484023 TRIM47Q96LD4 638 aa10.68□□□□□ -0.7
ATP13A3-207ENST00000484023 SOS2Q07890 1332 aaPredicted RBP10.67□□□□□ -0.7
ATP13A3-207ENST00000484023 C11orf95C9JLR9 678 aaPredicted RBP10.67□□□□□ -0.7
ATP13A3-207ENST00000484023 GNRH1P01148 92 aa10.67□□□□□ -0.7
ATP13A3-207ENST00000484023 CLDN10P78369 228 aa10.67□□□□□ -0.7
ATP13A3-207ENST00000484023 CDCA8Q53HL2 280 aa10.67□□□□□ -0.7
ATP13A3-207ENST00000484023 KANK4Q5T7N3 995 aaPredicted RBP10.67□□□□□ -0.7
ATP13A3-207ENST00000484023 ZNF787Q6DD87 383 aa10.67□□□□□ -0.7
ATP13A3-207ENST00000484023 ETNK1Q9HBU6 452 aa10.67□□□□□ -0.7
ATP13A3-207ENST00000484023 SENP2Q9HC62 589 aa10.67□□□□□ -0.7
ATP13A3-207ENST00000484023 POLMQ9NP87 494 aaPredicted RBP10.67□□□□□ -0.7
ATP13A3-207ENST00000484023 KIAA1024Q9UPX6 916 aa10.67□□□□□ -0.7
ATP13A3-207ENST00000484023 IL2RAP01589 272 aa10.66□□□□□ -0.7
ATP13A3-207ENST00000484023 SCNN1DP51172 638 aa10.66□□□□□ -0.7
ATP13A3-207ENST00000484023 SERPINA10Q9UK55 444 aa10.66□□□□□ -0.7
ATP13A3-207ENST00000484023 FIGNL2A6NMB9 653 aa10.65□□□□□ -0.7
ATP13A3-207ENST00000484023 TTLL8A6PVC2 850 aa10.65□□□□□ -0.7
ATP13A3-207ENST00000484023 ZBTB7BO15156 539 aaPredicted RBP10.65□□□□□ -0.7
ATP13A3-207ENST00000484023 FOXD4L5Q5VV16 416 aaPredicted RBP10.65□□□□□ -0.7
ATP13A3-207ENST00000484023 KIFC2Q96AC6 838 aa10.65□□□□□ -0.7
ATP13A3-207ENST00000484023 TMEM229AB2RXF0 380 aa10.64□□□□□ -0.71
ATP13A3-207ENST00000484023 GDF10P55107 478 aa10.64□□□□□ -0.71
ATP13A3-207ENST00000484023 CLN3Q13286 438 aa10.64□□□□□ -0.71
ATP13A3-207ENST00000484023 OGFOD1Q8N543 542 aa10.64□□□□□ -0.71
ATP13A3-207ENST00000484023 CNKSR1Q969H4 720 aa10.64□□□□□ -0.71
ATP13A3-207ENST00000484023 DNMT3LQ9UJW3 386 aa10.64□□□□□ -0.71
ATP13A3-207ENST00000484023 PSME1Q06323 249 aa10.63□□□□□ -0.71
ATP13A3-207ENST00000484023 TRIM50Q86XT4 487 aa10.63□□□□□ -0.71
ATP13A3-207ENST00000484023 XAGE2Q96GT9 111 aa10.63□□□□□ -0.71
ATP13A3-207ENST00000484023 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.62□□□□□ -0.71
ATP13A3-207ENST00000484023 RASA1P20936 1047 aa10.62□□□□□ -0.71
ATP13A3-207ENST00000484023 CRTC2Q53ET0 693 aaPredicted RBP10.62□□□□□ -0.71
ATP13A3-207ENST00000484023 RNF217Q8TC41 542 aa10.62□□□□□ -0.71
ATP13A3-207ENST00000484023 ZNF594Q96JF6 807 aaPredicted RBP10.62□□□□□ -0.71
ATP13A3-207ENST00000484023 NLRP3Q96P20 1036 aa10.62□□□□□ -0.71
ATP13A3-207ENST00000484023 ESYT1Q9BSJ8 1104 aa10.62□□□□□ -0.71
ATP13A3-207ENST00000484023 VRTNQ9H8Y1 702 aa10.62□□□□□ -0.71
ATP13A3-207ENST00000484023 DNAAF2Q9NVR5 837 aaKnown RBP10.62□□□□□ -0.71
ATP13A3-207ENST00000484023 HRH3Q9Y5N1 445 aa10.62□□□□□ -0.71
ATP13A3-207ENST00000484023 INHAP05111 366 aa10.61□□□□□ -0.71
ATP13A3-207ENST00000484023 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.61□□□□□ -0.71
ATP13A3-207ENST00000484023 ARID3AQ99856 593 aa10.61□□□□□ -0.71
ATP13A3-207ENST00000484023 SERTAD1Q9UHV2 236 aa10.61□□□□□ -0.71
ATP13A3-207ENST00000484023 MAN1A2O60476 641 aa10.6□□□□□ -0.71
ATP13A3-207ENST00000484023 RNF144AP50876 292 aaPredicted RBP10.6□□□□□ -0.71
ATP13A3-207ENST00000484023 ATP1A2P50993 1020 aa10.6□□□□□ -0.71
ATP13A3-207ENST00000484023 SRPK2P78362 688 aaKnown RBP10.6□□□□□ -0.71
ATP13A3-207ENST00000484023 CENPCQ03188 943 aa10.6□□□□□ -0.71
ATP13A3-207ENST00000484023 ESCO1Q5FWF5 840 aa10.6□□□□□ -0.71
ATP13A3-207ENST00000484023 CCDC102BQ68D86 513 aa10.6□□□□□ -0.71
ATP13A3-207ENST00000484023 TPCN2Q8NHX9 752 aa10.6□□□□□ -0.71
ATP13A3-207ENST00000484023 DKK1O94907 266 aa10.59□□□□□ -0.71
ATP13A3-207ENST00000484023 ZNF358Q9NW07 568 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms