RNA–Protein interactions for RNA: ENST00000483973.5

TRAPPC10-210, Transcript of trafficking protein particle complex 10, humanhuman

TSL 3

Gene TRAPPC10, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-210ENST00000483973 COL24A1Q17RW2 1714 aa18.72■□□□□ 0.59
TRAPPC10-210ENST00000483973 SHANK3Q9BYB0 1731 aa18.72■□□□□ 0.59
TRAPPC10-210ENST00000483973 FBLN1P23142 703 aa18.72■□□□□ 0.59
TRAPPC10-210ENST00000483973 MAP3K19Q56UN5 1328 aa18.71■□□□□ 0.59
TRAPPC10-210ENST00000483973 ANKRD36BQ8N2N9 1353 aa18.7■□□□□ 0.58
TRAPPC10-210ENST00000483973 TONSLQ96HA7 1378 aa18.7■□□□□ 0.58
TRAPPC10-210ENST00000483973 MSH5O43196 834 aa18.7■□□□□ 0.58
TRAPPC10-210ENST00000483973 HOXC9P31274 260 aa18.7■□□□□ 0.58
TRAPPC10-210ENST00000483973 C1QTNF8P60827 252 aa18.7■□□□□ 0.58
TRAPPC10-210ENST00000483973 ZCRB1Q8TBF4 217 aaKnown RBP18.7■□□□□ 0.58
TRAPPC10-210ENST00000483973 PUS7Q96PZ0 661 aaKnown RBP18.7■□□□□ 0.58
TRAPPC10-210ENST00000483973 CCNL1Q9UK58 526 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC10-210ENST00000483973 NLGN2Q8NFZ4 835 aa18.67■□□□□ 0.58
TRAPPC10-210ENST00000483973 UTRNP46939 3433 aa18.67■□□□□ 0.58
TRAPPC10-210ENST00000483973 MEGF6O75095 1541 aa18.66■□□□□ 0.58
TRAPPC10-210ENST00000483973 ST20-MTHFSA0A0A6YYL1 179 aa18.66■□□□□ 0.58
TRAPPC10-210ENST00000483973 NSD2O96028 1365 aa18.66■□□□□ 0.58
TRAPPC10-210ENST00000483973 USHBP1Q8N6Y0 703 aa18.65■□□□□ 0.58
TRAPPC10-210ENST00000483973 USP47Q96K76 1375 aa18.65■□□□□ 0.58
TRAPPC10-210ENST00000483973 GIGYF1O75420 1035 aaPredicted RBP18.64■□□□□ 0.57
TRAPPC10-210ENST00000483973 RRS1Q15050 365 aaKnown RBP18.64■□□□□ 0.57
TRAPPC10-210ENST00000483973 TESK2Q96S53 571 aa18.64■□□□□ 0.57
TRAPPC10-210ENST00000483973 NBPF6Q5VWK0 638 aa18.63■□□□□ 0.57
TRAPPC10-210ENST00000483973 COL23A1Q86Y22 540 aaPredicted RBP18.63■□□□□ 0.57
TRAPPC10-210ENST00000483973 RAPGEF4Q8WZA2 1011 aa18.63■□□□□ 0.57
TRAPPC10-210ENST00000483973 NBPF4Q96M43 638 aa18.63■□□□□ 0.57
TRAPPC10-210ENST00000483973 C5P01031 1676 aa18.63■□□□□ 0.57
TRAPPC10-210ENST00000483973 TAF1LQ8IZX4 1826 aa18.63■□□□□ 0.57
TRAPPC10-210ENST00000483973 MSL1Q68DK7 614 aa18.62■□□□□ 0.57
TRAPPC10-210ENST00000483973 GGNBP2Q9H3C7 697 aa18.62■□□□□ 0.57
TRAPPC10-210ENST00000483973 RTL1A6NKG5 1358 aa18.61■□□□□ 0.57
TRAPPC10-210ENST00000483973 ITGB4P16144 1822 aa18.6■□□□□ 0.57
TRAPPC10-210ENST00000483973 KIF20BQ96Q89 1820 aa18.6■□□□□ 0.57
TRAPPC10-210ENST00000483973 SMG6Q86US8 1419 aaKnown RBP18.6■□□□□ 0.57
TRAPPC10-210ENST00000483973 TATP17735 454 aaPredicted RBP18.6■□□□□ 0.57
TRAPPC10-210ENST00000483973 GRIN3BO60391 1043 aa18.59■□□□□ 0.57
TRAPPC10-210ENST00000483973 SLC24A1O60721 1099 aa18.59■□□□□ 0.57
TRAPPC10-210ENST00000483973 YBX3P16989 372 aaKnown RBP eCLIP18.59■□□□□ 0.57
TRAPPC10-210ENST00000483973 CGNL1Q0VF96 1302 aa18.58■□□□□ 0.57
TRAPPC10-210ENST00000483973 FYB1O15117 783 aa18.58■□□□□ 0.56
TRAPPC10-210ENST00000483973 MPRIPQ6WCQ1 1025 aa18.57■□□□□ 0.56
TRAPPC10-210ENST00000483973 HSP90AB2PQ58FF8 381 aa18.56■□□□□ 0.56
TRAPPC10-210ENST00000483973 PCDH11XQ9BZA7 1347 aa18.55■□□□□ 0.56
TRAPPC10-210ENST00000483973 PCDH11YQ9BZA8 1340 aa18.55■□□□□ 0.56
TRAPPC10-210ENST00000483973 TMF1P82094 1093 aa18.55■□□□□ 0.56
TRAPPC10-210ENST00000483973 PALLDQ8WX93 1383 aa18.55■□□□□ 0.56
TRAPPC10-210ENST00000483973 HMGB2P26583 209 aaKnown RBP18.53■□□□□ 0.56
TRAPPC10-210ENST00000483973 FLAD1Q8NFF5 587 aa18.53■□□□□ 0.56
TRAPPC10-210ENST00000483973 TOGARAM1Q9Y4F4 1720 aa18.53■□□□□ 0.56
TRAPPC10-210ENST00000483973 INSRP06213 1382 aa18.53■□□□□ 0.56
TRAPPC10-210ENST00000483973 C4BP0C0L5 1744 aa18.52■□□□□ 0.56
TRAPPC10-210ENST00000483973 FLT4P35916 1363 aa18.52■□□□□ 0.55
TRAPPC10-210ENST00000483973 UBR3Q6ZT12 1888 aa18.52■□□□□ 0.55
TRAPPC10-210ENST00000483973 MAP2P11137 1827 aaKnown RBP18.51■□□□□ 0.55
TRAPPC10-210ENST00000483973 CYP27B1O15528 508 aa18.51■□□□□ 0.55
TRAPPC10-210ENST00000483973 AK7Q96M32 723 aa18.51■□□□□ 0.55
TRAPPC10-210ENST00000483973 CD2APQ9Y5K6 639 aa18.51■□□□□ 0.55
TRAPPC10-210ENST00000483973 PHF14O94880 888 aa18.5■□□□□ 0.55
TRAPPC10-210ENST00000483973 SMARCC1Q92922 1105 aaPredicted RBP18.5■□□□□ 0.55
TRAPPC10-210ENST00000483973 ATP10DQ9P241 1426 aa18.49■□□□□ 0.55
TRAPPC10-210ENST00000483973 PKD1L3Q7Z443 1732 aa18.49■□□□□ 0.55
TRAPPC10-210ENST00000483973 PPM1GO15355 546 aaPredicted RBP18.49■□□□□ 0.55
TRAPPC10-210ENST00000483973 SMIM5Q71RC9 77 aa18.49■□□□□ 0.55
TRAPPC10-210ENST00000483973 WWC3Q9ULE0 1092 aa18.49■□□□□ 0.55
TRAPPC10-210ENST00000483973 EMILIN1Q9Y6C2 1016 aa18.48■□□□□ 0.55
TRAPPC10-210ENST00000483973 GOLGB1Q14789 3259 aaKnown RBP18.48■□□□□ 0.55
TRAPPC10-210ENST00000483973 CDCA8Q53HL2 280 aa18.47■□□□□ 0.55
TRAPPC10-210ENST00000483973 ZNF526Q8TF50 670 aaPredicted RBP18.47■□□□□ 0.55
TRAPPC10-210ENST00000483973 GPBP1L1Q9HC44 474 aaPredicted RBP18.47■□□□□ 0.55
TRAPPC10-210ENST00000483973 KIF24Q5T7B8 1368 aa18.46■□□□□ 0.55
TRAPPC10-210ENST00000483973 AMIGO3Q86WK7 504 aa18.46■□□□□ 0.55
TRAPPC10-210ENST00000483973 PIGBQ92521 554 aa18.46■□□□□ 0.55
TRAPPC10-210ENST00000483973 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.45■□□□□ 0.54
TRAPPC10-210ENST00000483973 SPG7Q9UQ90 795 aa18.45■□□□□ 0.54
TRAPPC10-210ENST00000483973 CARD14Q9BXL6 1004 aa18.44■□□□□ 0.54
TRAPPC10-210ENST00000483973 IGSF1Q8N6C5 1336 aa18.44■□□□□ 0.54
TRAPPC10-210ENST00000483973 NSD3Q9BZ95 1437 aa18.43■□□□□ 0.54
TRAPPC10-210ENST00000483973 LOC102724428A0A0B4J2F2 783 aa18.42■□□□□ 0.54
TRAPPC10-210ENST00000483973 SIK1P57059 783 aa18.42■□□□□ 0.54
TRAPPC10-210ENST00000483973 TMOD3Q9NYL9 352 aa18.42■□□□□ 0.54
TRAPPC10-210ENST00000483973 NKX1-1Q15270 411 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC10-210ENST00000483973 LINC00116Q8NCU8 138 aa18.41■□□□□ 0.54
TRAPPC10-210ENST00000483973 ANKRD26Q9UPS8 1709 aa18.4■□□□□ 0.54
TRAPPC10-210ENST00000483973 GNPATO15228 680 aa18.4■□□□□ 0.54
TRAPPC10-210ENST00000483973 SSFA2P28290 1259 aa18.4■□□□□ 0.54
TRAPPC10-210ENST00000483973 EYA1Q99502 592 aa18.4■□□□□ 0.54
TRAPPC10-210ENST00000483973 ASAP1Q9ULH1 1129 aa18.4■□□□□ 0.54
TRAPPC10-210ENST00000483973 ATP6V1AP38606 617 aa18.39■□□□□ 0.53
TRAPPC10-210ENST00000483973 N4BP2Q86UW6 1770 aaPredicted RBP18.38■□□□□ 0.53
TRAPPC10-210ENST00000483973 ITPK1Q13572 414 aa18.38■□□□□ 0.53
TRAPPC10-210ENST00000483973 IFFO2Q5TF58 517 aa18.38■□□□□ 0.53
TRAPPC10-210ENST00000483973 WASHC2AQ641Q2 1341 aa18.38■□□□□ 0.53
TRAPPC10-210ENST00000483973 ADCY9O60503 1353 aa18.38■□□□□ 0.53
TRAPPC10-210ENST00000483973 NCAPD2Q15021 1401 aa18.38■□□□□ 0.53
TRAPPC10-210ENST00000483973 IFNL2Q8IZJ0 200 aa18.37■□□□□ 0.53
TRAPPC10-210ENST00000483973 PHKG2P15735 406 aa18.36■□□□□ 0.53
TRAPPC10-210ENST00000483973 HSPA6P17066 643 aa18.36■□□□□ 0.53
TRAPPC10-210ENST00000483973 POLR3GLQ9BT43 218 aa18.36■□□□□ 0.53
TRAPPC10-210ENST00000483973 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.36■□□□□ 0.53
TRAPPC10-210ENST00000483973 MMP10P09238 476 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms