RNA–Protein interactions for RNA: ENST00000483882.1

NR1H3-222, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-222ENST00000483882 RRS1Q15050 365 aaKnown RBP20.44■□□□□ 0.86
NR1H3-222ENST00000483882 SYTL4Q96C24 671 aaPredicted RBP20.43■□□□□ 0.86
NR1H3-222ENST00000483882 MTFR1LQ9H019 292 aa20.43■□□□□ 0.86
NR1H3-222ENST00000483882 AMER1Q5JTC6 1135 aaPredicted RBP20.42■□□□□ 0.86
NR1H3-222ENST00000483882 RTL1A6NKG5 1358 aa20.42■□□□□ 0.86
NR1H3-222ENST00000483882 DDX10Q13206 875 aaKnown RBP20.41■□□□□ 0.86
NR1H3-222ENST00000483882 ZNF827Q17R98 1081 aa20.41■□□□□ 0.86
NR1H3-222ENST00000483882 CGNL1Q0VF96 1302 aa20.41■□□□□ 0.86
NR1H3-222ENST00000483882 PAPPAQ13219 1627 aa20.41■□□□□ 0.86
NR1H3-222ENST00000483882 ZCRB1Q8TBF4 217 aaKnown RBP20.4■□□□□ 0.86
NR1H3-222ENST00000483882 KAT6BQ8WYB5 2073 aa20.4■□□□□ 0.86
NR1H3-222ENST00000483882 LRRC4BQ9NT99 713 aa20.4■□□□□ 0.86
NR1H3-222ENST00000483882 MEGF6O75095 1541 aa20.39■□□□□ 0.85
NR1H3-222ENST00000483882 PRIM1P49642 420 aaKnown RBP20.39■□□□□ 0.85
NR1H3-222ENST00000483882 USHBP1Q8N6Y0 703 aa20.39■□□□□ 0.85
NR1H3-222ENST00000483882 KNSTRNQ9Y448 316 aa20.39■□□□□ 0.85
NR1H3-222ENST00000483882 RGPD2P0DJD1 1756 aa20.39■□□□□ 0.85
NR1H3-222ENST00000483882 SMG6Q86US8 1419 aaKnown RBP20.38■□□□□ 0.85
NR1H3-222ENST00000483882 NBPF6Q5VWK0 638 aa20.38■□□□□ 0.85
NR1H3-222ENST00000483882 NBPF4Q96M43 638 aa20.38■□□□□ 0.85
NR1H3-222ENST00000483882 FHDC1Q9C0D6 1143 aaPredicted RBP20.38■□□□□ 0.85
NR1H3-222ENST00000483882 SLC27A3Q5K4L6 730 aa20.37■□□□□ 0.85
NR1H3-222ENST00000483882 SGIP1Q9BQI5 828 aa20.36■□□□□ 0.85
NR1H3-222ENST00000483882 KIF20BQ96Q89 1820 aa20.36■□□□□ 0.85
NR1H3-222ENST00000483882 DOT1LQ8TEK3 1739 aa20.36■□□□□ 0.85
NR1H3-222ENST00000483882 KCNQ4P56696 695 aa20.35■□□□□ 0.85
NR1H3-222ENST00000483882 RAPGEF4Q8WZA2 1011 aa20.35■□□□□ 0.85
NR1H3-222ENST00000483882 SYT17Q9BSW7 474 aa20.35■□□□□ 0.85
NR1H3-222ENST00000483882 HSP90AB2PQ58FF8 381 aa20.34■□□□□ 0.85
NR1H3-222ENST00000483882 AKT1S1Q96B36 256 aa20.34■□□□□ 0.85
NR1H3-222ENST00000483882 ARXQ96QS3 562 aa20.34■□□□□ 0.85
NR1H3-222ENST00000483882 NPC1L1Q9UHC9 1359 aa20.34■□□□□ 0.85
NR1H3-222ENST00000483882 SHANK3Q9BYB0 1731 aa20.33■□□□□ 0.85
NR1H3-222ENST00000483882 TATP17735 454 aaPredicted RBP20.33■□□□□ 0.85
NR1H3-222ENST00000483882 NSD2O96028 1365 aa20.33■□□□□ 0.84
NR1H3-222ENST00000483882 INSRP06213 1382 aa20.33■□□□□ 0.84
NR1H3-222ENST00000483882 FLT4P35916 1363 aa20.33■□□□□ 0.84
NR1H3-222ENST00000483882 CC2D1BQ5T0F9 858 aaKnown RBP20.32■□□□□ 0.84
NR1H3-222ENST00000483882 TFCP2L1Q9NZI6 479 aa20.31■□□□□ 0.84
NR1H3-222ENST00000483882 CCNL1Q9UK58 526 aaPredicted RBP20.3■□□□□ 0.84
NR1H3-222ENST00000483882 PNPLA7Q6ZV29 1317 aa20.29■□□□□ 0.84
NR1H3-222ENST00000483882 CNGB1Q14028 1251 aaPredicted RBP20.29■□□□□ 0.84
NR1H3-222ENST00000483882 KLHL34Q8N239 644 aa20.29■□□□□ 0.84
NR1H3-222ENST00000483882 SLC16A10Q8TF71 515 aa20.29■□□□□ 0.84
NR1H3-222ENST00000483882 EMILIN1Q9Y6C2 1016 aa20.29■□□□□ 0.84
NR1H3-222ENST00000483882 KIF24Q5T7B8 1368 aa20.29■□□□□ 0.84
NR1H3-222ENST00000483882 ANKRD26Q9UPS8 1709 aa20.28■□□□□ 0.84
NR1H3-222ENST00000483882 PPM1GO15355 546 aaPredicted RBP20.28■□□□□ 0.84
NR1H3-222ENST00000483882 POLD1P28340 1107 aa20.28■□□□□ 0.84
NR1H3-222ENST00000483882 TNNT2P45379 298 aaPredicted RBP20.28■□□□□ 0.84
NR1H3-222ENST00000483882 MORC1Q86VD1 984 aa20.28■□□□□ 0.84
NR1H3-222ENST00000483882 PCDH11XQ9BZA7 1347 aa20.27■□□□□ 0.84
NR1H3-222ENST00000483882 PCDH11YQ9BZA8 1340 aa20.27■□□□□ 0.84
NR1H3-222ENST00000483882 LY75O60449 1722 aa20.27■□□□□ 0.83
NR1H3-222ENST00000483882 POLKQ9UBT6 870 aa20.26■□□□□ 0.83
NR1H3-222ENST00000483882 QSER1Q2KHR3 1735 aa20.25■□□□□ 0.83
NR1H3-222ENST00000483882 MSH5O43196 834 aa20.25■□□□□ 0.83
NR1H3-222ENST00000483882 MAP3K5Q99683 1374 aa20.24■□□□□ 0.83
NR1H3-222ENST00000483882 MPRIPQ6WCQ1 1025 aa20.23■□□□□ 0.83
NR1H3-222ENST00000483882 TUBGCP6Q96RT7 1819 aa20.23■□□□□ 0.83
NR1H3-222ENST00000483882 CYP27B1O15528 508 aa20.22■□□□□ 0.83
NR1H3-222ENST00000483882 PALLDQ8WX93 1383 aa20.21■□□□□ 0.83
NR1H3-222ENST00000483882 GPR162Q16538 588 aa20.2■□□□□ 0.82
NR1H3-222ENST00000483882 COL23A1Q86Y22 540 aaPredicted RBP20.2■□□□□ 0.82
NR1H3-222ENST00000483882 PELP1Q8IZL8 1130 aaKnown RBP20.19■□□□□ 0.82
NR1H3-222ENST00000483882 SPG7Q9UQ90 795 aa20.18■□□□□ 0.82
NR1H3-222ENST00000483882 MSL1Q68DK7 614 aa20.17■□□□□ 0.82
NR1H3-222ENST00000483882 ZNF784Q8NCA9 323 aaPredicted RBP20.17■□□□□ 0.82
NR1H3-222ENST00000483882 EYA1Q99502 592 aa20.17■□□□□ 0.82
NR1H3-222ENST00000483882 COL24A1Q17RW2 1714 aa20.16■□□□□ 0.82
NR1H3-222ENST00000483882 PKD1L3Q7Z443 1732 aa20.16■□□□□ 0.82
NR1H3-222ENST00000483882 PPP2R1AP30153 589 aa20.16■□□□□ 0.82
NR1H3-222ENST00000483882 MTHFSP49914 203 aa20.16■□□□□ 0.82
NR1H3-222ENST00000483882 SMARCC1Q92922 1105 aaPredicted RBP20.16■□□□□ 0.82
NR1H3-222ENST00000483882 NCAPD2Q15021 1401 aa20.16■□□□□ 0.82
NR1H3-222ENST00000483882 C5P01031 1676 aa20.16■□□□□ 0.82
NR1H3-222ENST00000483882 TOGARAM1Q9Y4F4 1720 aa20.16■□□□□ 0.82
NR1H3-222ENST00000483882 HMGB2P26583 209 aaKnown RBP20.15■□□□□ 0.82
NR1H3-222ENST00000483882 NLGN2Q8NFZ4 835 aa20.15■□□□□ 0.82
NR1H3-222ENST00000483882 PIGBQ92521 554 aa20.14■□□□□ 0.81
NR1H3-222ENST00000483882 MAP2P11137 1827 aaKnown RBP20.13■□□□□ 0.81
NR1H3-222ENST00000483882 NKX1-1Q15270 411 aaPredicted RBP20.13■□□□□ 0.81
NR1H3-222ENST00000483882 FLAD1Q8NFF5 587 aa20.13■□□□□ 0.81
NR1H3-222ENST00000483882 AK7Q96M32 723 aa20.13■□□□□ 0.81
NR1H3-222ENST00000483882 PRKRIP1Q9H875 184 aaPredicted RBP20.12■□□□□ 0.81
NR1H3-222ENST00000483882 ITGB4P16144 1822 aa20.11■□□□□ 0.81
NR1H3-222ENST00000483882 EIF4A2Q14240 407 aaKnown RBP20.11■□□□□ 0.81
NR1H3-222ENST00000483882 RALBP1Q15311 655 aa20.11■□□□□ 0.81
NR1H3-222ENST00000483882 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.11■□□□□ 0.81
NR1H3-222ENST00000483882 TMOD3Q9NYL9 352 aa20.11■□□□□ 0.81
NR1H3-222ENST00000483882 CHD4Q14839 1912 aa20.1■□□□□ 0.81
NR1H3-222ENST00000483882 IFNL2Q8IZJ0 200 aa20.1■□□□□ 0.81
NR1H3-222ENST00000483882 PHF14O94880 888 aa20.09■□□□□ 0.81
NR1H3-222ENST00000483882 PHKG2P15735 406 aa20.09■□□□□ 0.81
NR1H3-222ENST00000483882 C4BP0C0L5 1744 aa20.09■□□□□ 0.81
NR1H3-222ENST00000483882 TAF1LQ8IZX4 1826 aa20.09■□□□□ 0.81
NR1H3-222ENST00000483882 COL3A1P02461 1466 aaPredicted RBP20.08■□□□□ 0.81
NR1H3-222ENST00000483882 LOC102724428A0A0B4J2F2 783 aa20.08■□□□□ 0.81
NR1H3-222ENST00000483882 SIK1P57059 783 aa20.08■□□□□ 0.81
NR1H3-222ENST00000483882 IL13P35225 146 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms