RNA–Protein interactions for RNA: ENST00000483821.1

RXRB-205, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-205ENST00000483821 RARSP54136 660 aaKnown RBP17.29■□□□□ 0.36
RXRB-205ENST00000483821 EVA1CP58658 441 aa17.29■□□□□ 0.36
RXRB-205ENST00000483821 C1orf141Q5JVX7 400 aa17.29■□□□□ 0.36
RXRB-205ENST00000483821 THUMPD2Q9BTF0 503 aaKnown RBP17.29■□□□□ 0.36
RXRB-205ENST00000483821 COL18A1P39060 1754 aa17.28■□□□□ 0.36
RXRB-205ENST00000483821 CHL1O00533 1208 aa17.28■□□□□ 0.36
RXRB-205ENST00000483821 PIP4K2BP78356 416 aa17.28■□□□□ 0.36
RXRB-205ENST00000483821 AKAP4Q5JQC9 854 aa17.28■□□□□ 0.36
RXRB-205ENST00000483821 MCM10Q7L590 875 aa17.28■□□□□ 0.36
RXRB-205ENST00000483821 SPG7Q9UQ90 795 aa17.28■□□□□ 0.36
RXRB-205ENST00000483821 FAM208AQ9UK61 1670 aaKnown RBP17.28■□□□□ 0.36
RXRB-205ENST00000483821 WDR17Q8IZU2 1322 aa17.27■□□□□ 0.36
RXRB-205ENST00000483821 MS4A1P11836 297 aa17.27■□□□□ 0.36
RXRB-205ENST00000483821 CANXP27824 592 aaKnown RBP17.27■□□□□ 0.36
RXRB-205ENST00000483821 DCTN1Q14203 1278 aa17.27■□□□□ 0.36
RXRB-205ENST00000483821 ZNF530Q6P9A1 599 aaPredicted RBP17.27■□□□□ 0.36
RXRB-205ENST00000483821 MBIPQ9NS73 344 aa17.27■□□□□ 0.36
RXRB-205ENST00000483821 CAMTA1Q9Y6Y1 1673 aa17.26■□□□□ 0.35
RXRB-205ENST00000483821 ALDH1L2Q3SY69 923 aa17.26■□□□□ 0.35
RXRB-205ENST00000483821 PELP1Q8IZL8 1130 aaKnown RBP17.26■□□□□ 0.35
RXRB-205ENST00000483821 CERKQ8TCT0 537 aa17.26■□□□□ 0.35
RXRB-205ENST00000483821 DLG5Q8TDM6 1919 aa17.25■□□□□ 0.35
RXRB-205ENST00000483821 PDE3AQ14432 1141 aa17.25■□□□□ 0.35
RXRB-205ENST00000483821 TOM1L2Q6ZVM7 507 aa17.25■□□□□ 0.35
RXRB-205ENST00000483821 CRB1P82279 1406 aa17.24■□□□□ 0.35
RXRB-205ENST00000483821 LMO7Q8WWI1 1683 aa17.24■□□□□ 0.35
RXRB-205ENST00000483821 BCAR3O75815 825 aa17.24■□□□□ 0.35
RXRB-205ENST00000483821 TAF7Q15545 349 aaPredicted RBP17.24■□□□□ 0.35
RXRB-205ENST00000483821 CARD10Q9BWT7 1032 aa17.24■□□□□ 0.35
RXRB-205ENST00000483821 COL22A1Q8NFW1 1626 aaPredicted RBP17.24■□□□□ 0.35
RXRB-205ENST00000483821 IPO8O15397 1037 aaKnown RBP17.23■□□□□ 0.35
RXRB-205ENST00000483821 CHMP4AQ9BY43 222 aa17.23■□□□□ 0.35
RXRB-205ENST00000483821 TSPYL4Q9UJ04 414 aa17.23■□□□□ 0.35
RXRB-205ENST00000483821 PHLPP1O60346 1717 aa17.23■□□□□ 0.35
RXRB-205ENST00000483821 SOS1Q07889 1333 aaPredicted RBP17.22■□□□□ 0.35
RXRB-205ENST00000483821 ABCA3Q99758 1704 aa17.22■□□□□ 0.35
RXRB-205ENST00000483821 PLIN1O60240 522 aa17.22■□□□□ 0.35
RXRB-205ENST00000483821 HSP90AB1P08238 724 aaKnown RBP17.22■□□□□ 0.35
RXRB-205ENST00000483821 IL17REQ8NFR9 667 aa17.22■□□□□ 0.35
RXRB-205ENST00000483821 SMC4Q9NTJ3 1288 aa17.22■□□□□ 0.35
RXRB-205ENST00000483821 COL5A2P05997 1499 aaPredicted RBP17.22■□□□□ 0.35
RXRB-205ENST00000483821 RGPD5Q99666 1765 aa17.22■□□□□ 0.35
RXRB-205ENST00000483821 OVOS2A0A0G2JMS6 1433 aa17.21■□□□□ 0.35
RXRB-205ENST00000483821 VAMP4O75379 141 aa17.21■□□□□ 0.35
RXRB-205ENST00000483821 BRPF1P55201 1214 aaPredicted RBP17.21■□□□□ 0.35
RXRB-205ENST00000483821 TEFQ10587 303 aa17.21■□□□□ 0.35
RXRB-205ENST00000483821 TWISTNBQ3B726 338 aaPredicted RBP17.21■□□□□ 0.35
RXRB-205ENST00000483821 KIF16BQ96L93 1317 aa17.21■□□□□ 0.34
RXRB-205ENST00000483821 CEMIPQ8WUJ3 1361 aa17.2■□□□□ 0.34
RXRB-205ENST00000483821 IFNL2Q8IZJ0 200 aa17.2■□□□□ 0.34
RXRB-205ENST00000483821 RGPD2P0DJD1 1756 aa17.2■□□□□ 0.34
RXRB-205ENST00000483821 COL16A1Q07092 1604 aaPredicted RBP17.19■□□□□ 0.34
RXRB-205ENST00000483821 AAMPQ13685 434 aa17.19■□□□□ 0.34
RXRB-205ENST00000483821 ZKSCAN2Q63HK3 967 aa17.19■□□□□ 0.34
RXRB-205ENST00000483821 SSH1Q8WYL5 1049 aa17.19■□□□□ 0.34
RXRB-205ENST00000483821 FRAT1Q92837 279 aaPredicted RBP17.19■□□□□ 0.34
RXRB-205ENST00000483821 STRN4Q9NRL3 753 aa17.19■□□□□ 0.34
RXRB-205ENST00000483821 BTG4Q9NY30 223 aa17.19■□□□□ 0.34
RXRB-205ENST00000483821 COL14A1Q05707 1796 aaKnown RBP17.18■□□□□ 0.34
RXRB-205ENST00000483821 RNMTO43148 476 aaKnown RBP17.18■□□□□ 0.34
RXRB-205ENST00000483821 IL2RBP14784 551 aa17.18■□□□□ 0.34
RXRB-205ENST00000483821 C8orf58Q8NAV2 365 aa17.17■□□□□ 0.34
RXRB-205ENST00000483821 EXOC6Q8TAG9 804 aa17.17■□□□□ 0.34
RXRB-205ENST00000483821 JCADQ9P266 1359 aa17.16■□□□□ 0.34
RXRB-205ENST00000483821 LARP1Q6PKG0 1096 aaKnown RBP17.16■□□□□ 0.34
RXRB-205ENST00000483821 MPRIPQ6WCQ1 1025 aa17.16■□□□□ 0.34
RXRB-205ENST00000483821 ZCRB1Q8TBF4 217 aaKnown RBP17.16■□□□□ 0.34
RXRB-205ENST00000483821 ARHGAP45Q92619 1136 aa17.16■□□□□ 0.34
RXRB-205ENST00000483821 DCAF5Q96JK2 942 aa17.16■□□□□ 0.34
RXRB-205ENST00000483821 CCDC136Q96JN2 1154 aa17.16■□□□□ 0.34
RXRB-205ENST00000483821 CRBNQ96SW2 442 aa17.16■□□□□ 0.34
RXRB-205ENST00000483821 PHKG2P15735 406 aa17.15■□□□□ 0.34
RXRB-205ENST00000483821 TSPYL6Q8N831 410 aa17.15■□□□□ 0.34
RXRB-205ENST00000483821 BCL2L13Q9BXK5 485 aa17.15■□□□□ 0.34
RXRB-205ENST00000483821 LGR6Q9HBX8 967 aa17.15■□□□□ 0.34
RXRB-205ENST00000483821 PCDH11XQ9BZA7 1347 aa17.15■□□□□ 0.34
RXRB-205ENST00000483821 PCDH11YQ9BZA8 1340 aa17.15■□□□□ 0.34
RXRB-205ENST00000483821 LRRC37A3O60309 1634 aa17.14■□□□□ 0.33
RXRB-205ENST00000483821 ELL2O00472 640 aaPredicted RBP17.14■□□□□ 0.33
RXRB-205ENST00000483821 FTSJ3Q8IY81 847 aaKnown RBP17.14■□□□□ 0.33
RXRB-205ENST00000483821 MIS18AQ9NYP9 233 aa17.14■□□□□ 0.33
RXRB-205ENST00000483821 MEGF6O75095 1541 aa17.14■□□□□ 0.33
RXRB-205ENST00000483821 NUTM2BA6NNL0 878 aaPredicted RBP17.13■□□□□ 0.33
RXRB-205ENST00000483821 BTBD11A6QL63 1104 aa17.13■□□□□ 0.33
RXRB-205ENST00000483821 NUTM2EB1AL46 878 aaPredicted RBP17.13■□□□□ 0.33
RXRB-205ENST00000483821 ADAMTS2O95450 1211 aa17.13■□□□□ 0.33
RXRB-205ENST00000483821 C20orf194Q5TEA3 1177 aa17.13■□□□□ 0.33
RXRB-205ENST00000483821 ATF7IPQ6VMQ6 1270 aa17.13■□□□□ 0.33
RXRB-205ENST00000483821 NUTM2AQ8IVF1 878 aaPredicted RBP17.13■□□□□ 0.33
RXRB-205ENST00000483821 DZIP1LQ8IYY4 767 aaKnown RBP17.13■□□□□ 0.33
RXRB-205ENST00000483821 CDCA7Q9BWT1 371 aaPredicted RBP17.13■□□□□ 0.33
RXRB-205ENST00000483821 CHMP4BQ9H444 224 aaKnown RBP17.13■□□□□ 0.33
RXRB-205ENST00000483821 HOXB7P09629 217 aa17.12■□□□□ 0.33
RXRB-205ENST00000483821 MRPL50Q8N5N7 158 aaKnown RBP17.12■□□□□ 0.33
RXRB-205ENST00000483821 NOB1Q9ULX3 412 aaKnown RBP17.12■□□□□ 0.33
RXRB-205ENST00000483821 SPATA31A6Q5VVP1 1343 aa17.12■□□□□ 0.33
RXRB-205ENST00000483821 CCDC30Q5VVM6 783 aa17.11■□□□□ 0.33
RXRB-205ENST00000483821 STK31Q9BXU1 1019 aa17.11■□□□□ 0.33
RXRB-205ENST00000483821 API5Q9BZZ5 524 aaKnown RBP17.11■□□□□ 0.33
RXRB-205ENST00000483821 THRAP3Q9Y2W1 955 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms