RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 TIMELESSQ9UNS1 1208 aa25.13■■□□□ 1.61
ATG4B-221ENST00000483778 ZNF827Q17R98 1081 aa25.12■■□□□ 1.61
ATG4B-221ENST00000483778 CDCA8Q53HL2 280 aa25.12■■□□□ 1.61
ATG4B-221ENST00000483778 RTL1A6NKG5 1358 aa25.11■■□□□ 1.61
ATG4B-221ENST00000483778 MAP2P11137 1827 aaKnown RBP25.1■■□□□ 1.61
ATG4B-221ENST00000483778 NSD3Q9BZ95 1437 aa25.1■■□□□ 1.61
ATG4B-221ENST00000483778 SYTL4Q96C24 671 aaPredicted RBP25.09■■□□□ 1.61
ATG4B-221ENST00000483778 EMILIN1Q9Y6C2 1016 aa25.09■■□□□ 1.61
ATG4B-221ENST00000483778 NSD2O96028 1365 aa25.08■■□□□ 1.61
ATG4B-221ENST00000483778 INSRP06213 1382 aa25.07■■□□□ 1.6
ATG4B-221ENST00000483778 SGIP1Q9BQI5 828 aa25.07■■□□□ 1.6
ATG4B-221ENST00000483778 CLSPNQ9HAW4 1339 aa25.07■■□□□ 1.6
ATG4B-221ENST00000483778 TUBGCP6Q96RT7 1819 aa25.07■■□□□ 1.6
ATG4B-221ENST00000483778 AKT1S1Q96B36 256 aa25.06■■□□□ 1.6
ATG4B-221ENST00000483778 LY75O60449 1722 aa25.06■■□□□ 1.6
ATG4B-221ENST00000483778 POLR3GLQ9BT43 218 aa25.04■■□□□ 1.6
ATG4B-221ENST00000483778 FLT4P35916 1363 aa25.04■■□□□ 1.6
ATG4B-221ENST00000483778 MTFR1LQ9H019 292 aa25.03■■□□□ 1.6
ATG4B-221ENST00000483778 RAPGEF4Q8WZA2 1011 aa25.02■■□□□ 1.6
ATG4B-221ENST00000483778 PPM1GO15355 546 aaPredicted RBP25.01■■□□□ 1.59
ATG4B-221ENST00000483778 TATP17735 454 aaPredicted RBP25.01■■□□□ 1.59
ATG4B-221ENST00000483778 HSPA5P11021 654 aaKnown RBP25■■□□□ 1.59
ATG4B-221ENST00000483778 SLC27A3Q5K4L6 730 aa25■■□□□ 1.59
ATG4B-221ENST00000483778 FHDC1Q9C0D6 1143 aaPredicted RBP25■■□□□ 1.59
ATG4B-221ENST00000483778 SMG6Q86US8 1419 aaKnown RBP25■■□□□ 1.59
ATG4B-221ENST00000483778 ANKRD26Q9UPS8 1709 aa25■■□□□ 1.59
ATG4B-221ENST00000483778 ITGB4P16144 1822 aa24.99■■□□□ 1.59
ATG4B-221ENST00000483778 QSER1Q2KHR3 1735 aa24.99■■□□□ 1.59
ATG4B-221ENST00000483778 KIF24Q5T7B8 1368 aa24.98■■□□□ 1.59
ATG4B-221ENST00000483778 CGNL1Q0VF96 1302 aa24.98■■□□□ 1.59
ATG4B-221ENST00000483778 CYP27B1O15528 508 aa24.98■■□□□ 1.59
ATG4B-221ENST00000483778 SYT17Q9BSW7 474 aa24.98■■□□□ 1.59
ATG4B-221ENST00000483778 PNPLA7Q6ZV29 1317 aa24.97■■□□□ 1.59
ATG4B-221ENST00000483778 POLKQ9UBT6 870 aa24.97■■□□□ 1.59
ATG4B-221ENST00000483778 TOGARAM1Q9Y4F4 1720 aa24.96■■□□□ 1.59
ATG4B-221ENST00000483778 YY1P25490 414 aa24.96■■□□□ 1.59
ATG4B-221ENST00000483778 TNNT2P45379 298 aaPredicted RBP24.95■■□□□ 1.58
ATG4B-221ENST00000483778 WASHC2AQ641Q2 1341 aa24.94■■□□□ 1.58
ATG4B-221ENST00000483778 CCER1Q8TC90 406 aaPredicted RBP24.94■■□□□ 1.58
ATG4B-221ENST00000483778 ARXQ96QS3 562 aa24.94■■□□□ 1.58
ATG4B-221ENST00000483778 EYA1Q99502 592 aa24.94■■□□□ 1.58
ATG4B-221ENST00000483778 TFCP2L1Q9NZI6 479 aa24.94■■□□□ 1.58
ATG4B-221ENST00000483778 COL24A1Q17RW2 1714 aa24.94■■□□□ 1.58
ATG4B-221ENST00000483778 PKD1L3Q7Z443 1732 aa24.94■■□□□ 1.58
ATG4B-221ENST00000483778 EIF4G2P78344 907 aaKnown RBP eCLIP24.93■■□□□ 1.58
ATG4B-221ENST00000483778 CCNL1Q9UK58 526 aaPredicted RBP24.93■■□□□ 1.58
ATG4B-221ENST00000483778 NCAPD2Q15021 1401 aa24.93■■□□□ 1.58
ATG4B-221ENST00000483778 TAF1LQ8IZX4 1826 aa24.92■■□□□ 1.58
ATG4B-221ENST00000483778 PANK3Q9H999 370 aa24.92■■□□□ 1.58
ATG4B-221ENST00000483778 PCDH11XQ9BZA7 1347 aa24.91■■□□□ 1.58
ATG4B-221ENST00000483778 PCDH11YQ9BZA8 1340 aa24.91■■□□□ 1.58
ATG4B-221ENST00000483778 MPRIPQ6WCQ1 1025 aa24.91■■□□□ 1.58
ATG4B-221ENST00000483778 DCAF8L1A6NGE4 600 aa24.89■■□□□ 1.58
ATG4B-221ENST00000483778 COL23A1Q86Y22 540 aaPredicted RBP24.88■■□□□ 1.57
ATG4B-221ENST00000483778 SLC16A10Q8TF71 515 aa24.88■■□□□ 1.57
ATG4B-221ENST00000483778 C5P01031 1676 aa24.88■■□□□ 1.57
ATG4B-221ENST00000483778 EIF4A2Q14240 407 aaKnown RBP24.87■■□□□ 1.57
ATG4B-221ENST00000483778 PIGBQ92521 554 aa24.86■■□□□ 1.57
ATG4B-221ENST00000483778 NKX1-1Q15270 411 aaPredicted RBP24.85■■□□□ 1.57
ATG4B-221ENST00000483778 SMIM5Q71RC9 77 aa24.84■■□□□ 1.57
ATG4B-221ENST00000483778 PALLDQ8WX93 1383 aa24.83■■□□□ 1.57
ATG4B-221ENST00000483778 CHD4Q14839 1912 aa24.83■■□□□ 1.57
ATG4B-221ENST00000483778 SPG7Q9UQ90 795 aa24.83■■□□□ 1.57
ATG4B-221ENST00000483778 MSH5O43196 834 aa24.82■■□□□ 1.56
ATG4B-221ENST00000483778 AMIGO3Q86WK7 504 aa24.82■■□□□ 1.56
ATG4B-221ENST00000483778 KLHL34Q8N239 644 aa24.81■■□□□ 1.56
ATG4B-221ENST00000483778 UTRNP46939 3433 aa24.81■■□□□ 1.56
ATG4B-221ENST00000483778 MAP3K5Q99683 1374 aa24.8■■□□□ 1.56
ATG4B-221ENST00000483778 MSL1Q68DK7 614 aa24.8■■□□□ 1.56
ATG4B-221ENST00000483778 PHKG2P15735 406 aa24.78■■□□□ 1.56
ATG4B-221ENST00000483778 POLD1P28340 1107 aa24.78■■□□□ 1.56
ATG4B-221ENST00000483778 NLGN2Q8NFZ4 835 aa24.78■■□□□ 1.56
ATG4B-221ENST00000483778 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.78■■□□□ 1.56
ATG4B-221ENST00000483778 ASAP1Q9ULH1 1129 aa24.78■■□□□ 1.56
ATG4B-221ENST00000483778 C4BP0C0L5 1744 aa24.78■■□□□ 1.56
ATG4B-221ENST00000483778 UBR3Q6ZT12 1888 aa24.77■■□□□ 1.56
ATG4B-221ENST00000483778 SMARCC1Q92922 1105 aaPredicted RBP24.76■■□□□ 1.55
ATG4B-221ENST00000483778 IFNL2Q8IZJ0 200 aa24.75■■□□□ 1.55
ATG4B-221ENST00000483778 IGSF1Q8N6C5 1336 aa24.75■■□□□ 1.55
ATG4B-221ENST00000483778 MORC1Q86VD1 984 aa24.74■■□□□ 1.55
ATG4B-221ENST00000483778 LINC00116Q8NCU8 138 aa24.73■■□□□ 1.55
ATG4B-221ENST00000483778 LOC102724428A0A0B4J2F2 783 aa24.72■■□□□ 1.55
ATG4B-221ENST00000483778 SIK1P57059 783 aa24.72■■□□□ 1.55
ATG4B-221ENST00000483778 ITPK1Q13572 414 aa24.72■■□□□ 1.55
ATG4B-221ENST00000483778 GPR162Q16538 588 aa24.72■■□□□ 1.55
ATG4B-221ENST00000483778 AEBP1Q8IUX7 1158 aa24.72■■□□□ 1.55
ATG4B-221ENST00000483778 ATG3Q9NT62 314 aa24.72■■□□□ 1.55
ATG4B-221ENST00000483778 TMOD3Q9NYL9 352 aa24.72■■□□□ 1.55
ATG4B-221ENST00000483778 ZNF784Q8NCA9 323 aaPredicted RBP24.7■■□□□ 1.54
ATG4B-221ENST00000483778 KIF7Q2M1P5 1343 aa24.69■■□□□ 1.54
ATG4B-221ENST00000483778 PELP1Q8IZL8 1130 aaKnown RBP24.69■■□□□ 1.54
ATG4B-221ENST00000483778 GOLGB1Q14789 3259 aaKnown RBP24.69■■□□□ 1.54
ATG4B-221ENST00000483778 PHF14O94880 888 aa24.68■■□□□ 1.54
ATG4B-221ENST00000483778 AMER1Q5JTC6 1135 aaPredicted RBP24.68■■□□□ 1.54
ATG4B-221ENST00000483778 AK7Q96M32 723 aa24.68■■□□□ 1.54
ATG4B-221ENST00000483778 SLC4A9Q96Q91 983 aa24.68■■□□□ 1.54
ATG4B-221ENST00000483778 KNSTRNQ9Y448 316 aa24.68■■□□□ 1.54
ATG4B-221ENST00000483778 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.66■■□□□ 1.54
ATG4B-221ENST00000483778 YBX3P16989 372 aaKnown RBP eCLIP24.66■■□□□ 1.54
ATG4B-221ENST00000483778 FLAD1Q8NFF5 587 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms