RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 HSP90AB2PQ58FF8 381 aa27.45■■□□□ 1.98
HPS4-213ENST00000483631 HSPA5P11021 654 aaKnown RBP27.44■■□□□ 1.98
HPS4-213ENST00000483631 MAP2P11137 1827 aaKnown RBP27.44■■□□□ 1.98
HPS4-213ENST00000483631 PAPPAQ13219 1627 aa27.43■■□□□ 1.98
HPS4-213ENST00000483631 SLC15A2Q16348 729 aa27.43■■□□□ 1.98
HPS4-213ENST00000483631 RAPGEF4Q8WZA2 1011 aa27.43■■□□□ 1.98
HPS4-213ENST00000483631 DOT1LQ8TEK3 1739 aa27.42■■□□□ 1.98
HPS4-213ENST00000483631 EMILIN1Q9Y6C2 1016 aa27.4■■□□□ 1.98
HPS4-213ENST00000483631 NCAPD2Q15021 1401 aa27.4■■□□□ 1.98
HPS4-213ENST00000483631 WASHC2AQ641Q2 1341 aa27.4■■□□□ 1.98
HPS4-213ENST00000483631 TATP17735 454 aaPredicted RBP27.39■■□□□ 1.98
HPS4-213ENST00000483631 SLC27A3Q5K4L6 730 aa27.39■■□□□ 1.98
HPS4-213ENST00000483631 USHBP1Q8N6Y0 703 aa27.37■■□□□ 1.97
HPS4-213ENST00000483631 LY75O60449 1722 aa27.36■■□□□ 1.97
HPS4-213ENST00000483631 POLR3GLQ9BT43 218 aa27.36■■□□□ 1.97
HPS4-213ENST00000483631 PPP1R1BQ9UD71 204 aaPredicted RBP27.36■■□□□ 1.97
HPS4-213ENST00000483631 PCDH11XQ9BZA7 1347 aa27.36■■□□□ 1.97
HPS4-213ENST00000483631 PCDH11YQ9BZA8 1340 aa27.36■■□□□ 1.97
HPS4-213ENST00000483631 NSD2O96028 1365 aa27.35■■□□□ 1.97
HPS4-213ENST00000483631 PRIM1P49642 420 aaKnown RBP27.35■■□□□ 1.97
HPS4-213ENST00000483631 QSER1Q2KHR3 1735 aa27.34■■□□□ 1.97
HPS4-213ENST00000483631 PKD1L3Q7Z443 1732 aa27.34■■□□□ 1.97
HPS4-213ENST00000483631 POLKQ9UBT6 870 aa27.33■■□□□ 1.97
HPS4-213ENST00000483631 SYTL4Q96C24 671 aaPredicted RBP27.32■■□□□ 1.96
HPS4-213ENST00000483631 PDGFDQ9GZP0 370 aaPredicted RBP27.32■■□□□ 1.96
HPS4-213ENST00000483631 LRRC4BQ9NT99 713 aa27.32■■□□□ 1.96
HPS4-213ENST00000483631 MTFR1LQ9H019 292 aa27.31■■□□□ 1.96
HPS4-213ENST00000483631 PANK3Q9H999 370 aa27.31■■□□□ 1.96
HPS4-213ENST00000483631 PLEKHG2Q9H7P9 1386 aa27.31■■□□□ 1.96
HPS4-213ENST00000483631 PPM1GO15355 546 aaPredicted RBP27.3■■□□□ 1.96
HPS4-213ENST00000483631 ZBTB7AO95365 584 aa27.29■■□□□ 1.96
HPS4-213ENST00000483631 HMGB2P26583 209 aaKnown RBP27.29■■□□□ 1.96
HPS4-213ENST00000483631 PTGER2P43116 358 aa27.28■■□□□ 1.96
HPS4-213ENST00000483631 AKT1S1Q96B36 256 aa27.28■■□□□ 1.96
HPS4-213ENST00000483631 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.28■■□□□ 1.962e-7■□□□□ 11.1
HPS4-213ENST00000483631 ZNF827Q17R98 1081 aa27.26■■□□□ 1.95
HPS4-213ENST00000483631 EYA1Q99502 592 aa27.26■■□□□ 1.95
HPS4-213ENST00000483631 CYP27B1O15528 508 aa27.25■■□□□ 1.95
HPS4-213ENST00000483631 NKX1-1Q15270 411 aaPredicted RBP27.24■■□□□ 1.95
HPS4-213ENST00000483631 SLC16A10Q8TF71 515 aa27.24■■□□□ 1.95
HPS4-213ENST00000483631 SPG7Q9UQ90 795 aa27.24■■□□□ 1.95
HPS4-213ENST00000483631 SGIP1Q9BQI5 828 aa27.23■■□□□ 1.95
HPS4-213ENST00000483631 ATF5Q9Y2D1 282 aaPredicted RBP27.23■■□□□ 1.95
HPS4-213ENST00000483631 ITGB4P16144 1822 aa27.23■■□□□ 1.95
HPS4-213ENST00000483631 TOGARAM1Q9Y4F4 1720 aa27.21■■□□□ 1.95
HPS4-213ENST00000483631 EIF4A2Q14240 407 aaKnown RBP27.21■■□□□ 1.95
HPS4-213ENST00000483631 CCNL1Q9UK58 526 aaPredicted RBP27.21■■□□□ 1.95
HPS4-213ENST00000483631 TUBGCP6Q96RT7 1819 aa27.2■■□□□ 1.95
HPS4-213ENST00000483631 COL24A1Q17RW2 1714 aa27.2■■□□□ 1.94
HPS4-213ENST00000483631 KNSTRNQ9Y448 316 aa27.2■■□□□ 1.94
HPS4-213ENST00000483631 DCAF8L1A6NGE4 600 aa27.19■■□□□ 1.94
HPS4-213ENST00000483631 TNNT2P45379 298 aaPredicted RBP27.19■■□□□ 1.94
HPS4-213ENST00000483631 IGSF1Q8N6C5 1336 aa27.17■■□□□ 1.94
HPS4-213ENST00000483631 MORC1Q86VD1 984 aa27.17■■□□□ 1.94
HPS4-213ENST00000483631 SMARCC1Q92922 1105 aaPredicted RBP27.17■■□□□ 1.94
HPS4-213ENST00000483631 TFCP2L1Q9NZI6 479 aa27.17■■□□□ 1.94
HPS4-213ENST00000483631 PNPLA7Q6ZV29 1317 aa27.16■■□□□ 1.94
HPS4-213ENST00000483631 C5P01031 1676 aa27.16■■□□□ 1.94
HPS4-213ENST00000483631 TAF1LQ8IZX4 1826 aa27.16■■□□□ 1.94
HPS4-213ENST00000483631 KIF7Q2M1P5 1343 aa27.16■■□□□ 1.94
HPS4-213ENST00000483631 PALLDQ8WX93 1383 aa27.15■■□□□ 1.94
HPS4-213ENST00000483631 MAP3K5Q99683 1374 aa27.15■■□□□ 1.94
HPS4-213ENST00000483631 MPRIPQ6WCQ1 1025 aa27.15■■□□□ 1.94
HPS4-213ENST00000483631 IFNL2Q8IZJ0 200 aa27.14■■□□□ 1.94
HPS4-213ENST00000483631 KCNQ4P56696 695 aa27.13■■□□□ 1.93
HPS4-213ENST00000483631 ARXQ96QS3 562 aa27.13■■□□□ 1.93
HPS4-213ENST00000483631 PHKG2P15735 406 aa27.11■■□□□ 1.93
HPS4-213ENST00000483631 AMER1Q5JTC6 1135 aaPredicted RBP27.11■■□□□ 1.93
HPS4-213ENST00000483631 SYT17Q9BSW7 474 aa27.11■■□□□ 1.93
HPS4-213ENST00000483631 FHDC1Q9C0D6 1143 aaPredicted RBP27.11■■□□□ 1.93
HPS4-213ENST00000483631 PIGBQ92521 554 aa27.1■■□□□ 1.93
HPS4-213ENST00000483631 POLD1P28340 1107 aa27.08■■□□□ 1.93
HPS4-213ENST00000483631 FLAD1Q8NFF5 587 aa27.07■■□□□ 1.92
HPS4-213ENST00000483631 TMOD3Q9NYL9 352 aa27.07■■□□□ 1.92
HPS4-213ENST00000483631 HSP90AB1P08238 724 aaKnown RBP27.06■■□□□ 1.92
HPS4-213ENST00000483631 AMOTQ4VCS5 1084 aa27.06■■□□□ 1.92
HPS4-213ENST00000483631 PER1O15534 1290 aaPredicted RBP27.05■■□□□ 1.92
HPS4-213ENST00000483631 PLEKHO1Q53GL0 409 aaPredicted RBP27.05■■□□□ 1.92
HPS4-213ENST00000483631 C4BP0C0L5 1744 aa27.04■■□□□ 1.92
HPS4-213ENST00000483631 KDRP35968 1356 aa27.04■■□□□ 1.92
HPS4-213ENST00000483631 COL23A1Q86Y22 540 aaPredicted RBP27.03■■□□□ 1.92
HPS4-213ENST00000483631 ERVV-2B6SEH9 535 aa27.02■■□□□ 1.92
HPS4-213ENST00000483631 DCAF5Q96JK2 942 aa27.02■■□□□ 1.92
HPS4-213ENST00000483631 NPC1L1Q9UHC9 1359 aa27.01■■□□□ 1.91
HPS4-213ENST00000483631 LOC102724428A0A0B4J2F2 783 aa27.01■■□□□ 1.91
HPS4-213ENST00000483631 SIK1P57059 783 aa27.01■■□□□ 1.91
HPS4-213ENST00000483631 UBR3Q6ZT12 1888 aa27.01■■□□□ 1.91
HPS4-213ENST00000483631 YY1P25490 414 aa27■■□□□ 1.91
HPS4-213ENST00000483631 IL13P35225 146 aa27■■□□□ 1.91
HPS4-213ENST00000483631 ZNF831Q5JPB2 1677 aa27■■□□□ 1.91
HPS4-213ENST00000483631 ZNF530Q6P9A1 599 aaPredicted RBP26.97■■□□□ 1.91
HPS4-213ENST00000483631 AK7Q96M32 723 aa26.97■■□□□ 1.91
HPS4-213ENST00000483631 ASAP1Q9ULH1 1129 aa26.97■■□□□ 1.91
HPS4-213ENST00000483631 MSH5O43196 834 aa26.96■■□□□ 1.91
HPS4-213ENST00000483631 SULT6B1Q6IMI4 303 aa26.96■■□□□ 1.91
HPS4-213ENST00000483631 AEBP1Q8IUX7 1158 aa26.96■■□□□ 1.91
HPS4-213ENST00000483631 ATG3Q9NT62 314 aa26.96■■□□□ 1.91
HPS4-213ENST00000483631 CHD4Q14839 1912 aa26.96■■□□□ 1.91
HPS4-213ENST00000483631 KDM6AO15550 1401 aaPredicted RBP26.94■■□□□ 1.9
HPS4-213ENST00000483631 SSFA2P28290 1259 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms