RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 U2AF2P26368 475 aaKnown RBP eCLIP14.39□□□□□ -0.11
VTI1A-205ENST00000483122 PDE4CQ08493 712 aa14.39□□□□□ -0.11
VTI1A-205ENST00000483122 FKBP5Q13451 457 aaPredicted RBP14.39□□□□□ -0.11
VTI1A-205ENST00000483122 MYOM2P54296 1465 aa14.38□□□□□ -0.11
VTI1A-205ENST00000483122 OTUD7AQ8TE49 926 aaPredicted RBP14.38□□□□□ -0.11
VTI1A-205ENST00000483122 PTPRMP28827 1452 aa14.38□□□□□ -0.11
VTI1A-205ENST00000483122 CFAP65Q6ZU64 1925 aaKnown RBP14.38□□□□□ -0.11
VTI1A-205ENST00000483122 GADD45BO75293 160 aaPredicted RBP14.37□□□□□ -0.11
VTI1A-205ENST00000483122 INTS3Q68E01 1043 aaKnown RBP14.37□□□□□ -0.11
VTI1A-205ENST00000483122 MRPL50Q8N5N7 158 aaKnown RBP14.37□□□□□ -0.11
VTI1A-205ENST00000483122 SPTLC3Q9NUV7 552 aa14.37□□□□□ -0.11
VTI1A-205ENST00000483122 ADCY5O95622 1261 aa14.37□□□□□ -0.11
VTI1A-205ENST00000483122 FOXD4L6Q3SYB3 417 aaPredicted RBP14.37□□□□□ -0.11
VTI1A-205ENST00000483122 FOXD4L3Q6VB84 417 aaPredicted RBP14.37□□□□□ -0.11
VTI1A-205ENST00000483122 QRICH2Q9H0J4 1663 aa14.37□□□□□ -0.11
VTI1A-205ENST00000483122 KDM4FA0A1W2PPD8 638 aa14.36□□□□□ -0.11
VTI1A-205ENST00000483122 BRD1O95696 1058 aa14.36□□□□□ -0.11
VTI1A-205ENST00000483122 GDPD2Q9HCC8 539 aa14.36□□□□□ -0.11
VTI1A-205ENST00000483122 ATAD2Q6PL18 1390 aa14.36□□□□□ -0.11
VTI1A-205ENST00000483122 PIK3R4Q99570 1358 aa14.36□□□□□ -0.11
VTI1A-205ENST00000483122 TMEM51Q9NW97 253 aa14.36□□□□□ -0.11
VTI1A-205ENST00000483122 RIOK3O14730 519 aaKnown RBP14.35□□□□□ -0.11
VTI1A-205ENST00000483122 SDSP20132 328 aa14.35□□□□□ -0.11
VTI1A-205ENST00000483122 BRPF1P55201 1214 aaPredicted RBP14.35□□□□□ -0.11
VTI1A-205ENST00000483122 SMARCA5O60264 1052 aaPredicted RBP14.35□□□□□ -0.11
VTI1A-205ENST00000483122 SYAP1Q96A49 352 aaPredicted RBP14.35□□□□□ -0.11
VTI1A-205ENST00000483122 TMX3Q96JJ7 454 aa14.35□□□□□ -0.11
VTI1A-205ENST00000483122 CHMP4BQ9H444 224 aaKnown RBP14.35□□□□□ -0.11
VTI1A-205ENST00000483122 PTCH1Q13635 1447 aa14.35□□□□□ -0.11
VTI1A-205ENST00000483122 KNDC1Q76NI1 1749 aa14.34□□□□□ -0.11
VTI1A-205ENST00000483122 COL3A1P02461 1466 aaPredicted RBP14.34□□□□□ -0.11
VTI1A-205ENST00000483122 UVSSAQ2YD98 709 aa14.34□□□□□ -0.11
VTI1A-205ENST00000483122 ANKRD7Q92527 254 aa14.34□□□□□ -0.11
VTI1A-205ENST00000483122 VAMP4O75379 141 aa14.34□□□□□ -0.11
VTI1A-205ENST00000483122 TSPYL6Q8N831 410 aa14.34□□□□□ -0.11
VTI1A-205ENST00000483122 CFAP44Q96MT7 982 aa14.34□□□□□ -0.11
VTI1A-205ENST00000483122 IFT172Q9UG01 1749 aa14.34□□□□□ -0.11
VTI1A-205ENST00000483122 PIK3C2BO00750 1634 aa14.33□□□□□ -0.12
VTI1A-205ENST00000483122 ABCC4O15439 1325 aa14.33□□□□□ -0.12
VTI1A-205ENST00000483122 ELL2O00472 640 aaPredicted RBP14.33□□□□□ -0.12
VTI1A-205ENST00000483122 CEBPAP49715 358 aaPredicted RBP14.33□□□□□ -0.12
VTI1A-205ENST00000483122 DCTPP1Q9H773 170 aa14.33□□□□□ -0.12
VTI1A-205ENST00000483122 NEK4P51957 841 aa14.32□□□□□ -0.12
VTI1A-205ENST00000483122 FBXO31Q5XUX0 539 aaPredicted RBP14.32□□□□□ -0.12
VTI1A-205ENST00000483122 TMEM132EQ6IEE7 984 aa14.32□□□□□ -0.12
VTI1A-205ENST00000483122 ARHGAP45Q92619 1136 aa14.32□□□□□ -0.12
VTI1A-205ENST00000483122 CGNQ9P2M7 1197 aaKnown RBP14.32□□□□□ -0.12
VTI1A-205ENST00000483122 PYCARDQ9ULZ3 195 aa14.32□□□□□ -0.12
VTI1A-205ENST00000483122 NSD2O96028 1365 aa14.32□□□□□ -0.12
VTI1A-205ENST00000483122 ZBTB22O15209 634 aa14.32□□□□□ -0.12
VTI1A-205ENST00000483122 HCLS1P14317 486 aaPredicted RBP14.32□□□□□ -0.12
VTI1A-205ENST00000483122 TPRNQ4KMQ1 711 aa14.32□□□□□ -0.12
VTI1A-205ENST00000483122 NOL8Q76FK4 1167 aaKnown RBP14.32□□□□□ -0.12
VTI1A-205ENST00000483122 USP48Q86UV5 1035 aa14.32□□□□□ -0.12
VTI1A-205ENST00000483122 FAM184AQ8NB25 1140 aa14.32□□□□□ -0.12
VTI1A-205ENST00000483122 GGNBP2Q9H3C7 697 aa14.32□□□□□ -0.12
VTI1A-205ENST00000483122 TNRQ92752 1358 aa14.31□□□□□ -0.12
VTI1A-205ENST00000483122 PHF14O94880 888 aa14.31□□□□□ -0.12
VTI1A-205ENST00000483122 ZNF771Q7L3S4 317 aaPredicted RBP14.31□□□□□ -0.12
VTI1A-205ENST00000483122 KCNF1Q9H3M0 494 aa14.31□□□□□ -0.12
VTI1A-205ENST00000483122 KIF1BO60333 1816 aa14.31□□□□□ -0.12
VTI1A-205ENST00000483122 NEURL4Q96JN8 1562 aa14.31□□□□□ -0.12
VTI1A-205ENST00000483122 ANKRD36BQ8N2N9 1353 aa14.31□□□□□ -0.12
VTI1A-205ENST00000483122 NRXN1Q9ULB1 1477 aa14.31□□□□□ -0.12
VTI1A-205ENST00000483122 THUMPD2Q9BTF0 503 aaKnown RBP14.31□□□□□ -0.12
VTI1A-205ENST00000483122 APBB1O00213 710 aa14.3□□□□□ -0.12
VTI1A-205ENST00000483122 CASC1Q6TDU7 716 aa14.3□□□□□ -0.12
VTI1A-205ENST00000483122 KIAA1524Q8TCG1 905 aa14.3□□□□□ -0.12
VTI1A-205ENST00000483122 SETD1BQ9UPS6 1966 aaKnown RBP14.3□□□□□ -0.12
VTI1A-205ENST00000483122 REC8O95072 547 aa14.3□□□□□ -0.12
VTI1A-205ENST00000483122 PLPPR3Q6T4P5 718 aa14.3□□□□□ -0.12
VTI1A-205ENST00000483122 ZNF428Q96B54 188 aa14.3□□□□□ -0.12
VTI1A-205ENST00000483122 DIAPH3Q9NSV4 1193 aa14.3□□□□□ -0.12
VTI1A-205ENST00000483122 TCHHQ07283 1943 aa14.3□□□□□ -0.12
VTI1A-205ENST00000483122 AP5Z1O43299 807 aa14.29□□□□□ -0.12
VTI1A-205ENST00000483122 CTIFO43310 598 aaKnown RBP14.29□□□□□ -0.12
VTI1A-205ENST00000483122 PLCB2Q00722 1185 aa14.29□□□□□ -0.12
VTI1A-205ENST00000483122 CUL4AQ13619 759 aa14.29□□□□□ -0.12
VTI1A-205ENST00000483122 SETBP1Q9Y6X0 1596 aa14.29□□□□□ -0.12
VTI1A-205ENST00000483122 ERC2O15083 957 aa14.29□□□□□ -0.12
VTI1A-205ENST00000483122 KDM4AO75164 1064 aa14.29□□□□□ -0.12
VTI1A-205ENST00000483122 SLC52A1Q9NWF4 448 aa14.29□□□□□ -0.12
VTI1A-205ENST00000483122 NAP1L2Q9ULW6 460 aaPredicted RBP14.29□□□□□ -0.12
VTI1A-205ENST00000483122 CABP2Q9NPB3 220 aa14.28□□□□□ -0.12
VTI1A-205ENST00000483122 VGLL3A8MV65 326 aa14.27□□□□□ -0.12
VTI1A-205ENST00000483122 CHAF1AQ13111 956 aaPredicted RBP14.27□□□□□ -0.12
VTI1A-205ENST00000483122 CCDC183Q5T5S1 534 aa14.27□□□□□ -0.12
VTI1A-205ENST00000483122 OGFRQ9NZT2 677 aa14.27□□□□□ -0.12
VTI1A-205ENST00000483122 ZNF142P52746 1687 aaPredicted RBP14.27□□□□□ -0.12
VTI1A-205ENST00000483122 TAF3Q5VWG9 929 aa14.27□□□□□ -0.13
VTI1A-205ENST00000483122 DIAPH1O60610 1272 aaKnown RBP14.26□□□□□ -0.13
VTI1A-205ENST00000483122 CHGAP10645 457 aaKnown RBP14.26□□□□□ -0.13
VTI1A-205ENST00000483122 NCBP1Q09161 790 aaKnown RBP14.26□□□□□ -0.13
VTI1A-205ENST00000483122 FEZ1Q99689 392 aa14.26□□□□□ -0.13
VTI1A-205ENST00000483122 BCL11BQ9C0K0 894 aaPredicted RBP14.26□□□□□ -0.13
VTI1A-205ENST00000483122 TULP4Q9NRJ4 1543 aa14.26□□□□□ -0.13
VTI1A-205ENST00000483122 SPC24Q8NBT2 197 aa14.26□□□□□ -0.13
VTI1A-205ENST00000483122 PALD1Q9ULE6 856 aa14.26□□□□□ -0.13
VTI1A-205ENST00000483122 ADGRB3O60242 1522 aa14.25□□□□□ -0.13
VTI1A-205ENST00000483122 ADGRB1O14514 1584 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms