RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 CCDC144BQ3MJ40 725 aa7.02□□□□□ -1.29
R3HDM1-216ENST00000483065 EGFLAMQ63HQ2 1017 aa7.02□□□□□ -1.29
R3HDM1-216ENST00000483065 TRIM50Q86XT4 487 aa7.02□□□□□ -1.29
R3HDM1-216ENST00000483065 ANKMY2Q8IV38 441 aa7.02□□□□□ -1.29
R3HDM1-216ENST00000483065 CCAR1Q8IX12 1150 aaKnown RBP7.02□□□□□ -1.29
R3HDM1-216ENST00000483065 RGL4Q8IZJ4 473 aa7.02□□□□□ -1.29
R3HDM1-216ENST00000483065 LARGE2Q8N3Y3 721 aa7.02□□□□□ -1.29
R3HDM1-216ENST00000483065 TTC13Q8NBP0 860 aa7.02□□□□□ -1.29
R3HDM1-216ENST00000483065 CCDC136Q96JN2 1154 aa7.02□□□□□ -1.29
R3HDM1-216ENST00000483065 NOP58Q9Y2X3 529 aaKnown RBP7.02□□□□□ -1.29
R3HDM1-216ENST00000483065 EIF3JO75822 258 aaKnown RBP7.01□□□□□ -1.29
R3HDM1-216ENST00000483065 LORP23490 312 aaPredicted RBP7.01□□□□□ -1.29
R3HDM1-216ENST00000483065 ATP1A2P50993 1020 aa7.01□□□□□ -1.29
R3HDM1-216ENST00000483065 MCCD1P59942 119 aaPredicted RBP7.01□□□□□ -1.29
R3HDM1-216ENST00000483065 PTK7Q13308 1070 aa7.01□□□□□ -1.29
R3HDM1-216ENST00000483065 MRPL58Q14197 206 aaKnown RBP7.01□□□□□ -1.29
R3HDM1-216ENST00000483065 TMEM87AQ8NBN3 555 aa7.01□□□□□ -1.29
R3HDM1-216ENST00000483065 RNF34Q969K3 372 aa7.01□□□□□ -1.29
R3HDM1-216ENST00000483065 CAPN10Q9HC96 672 aa7.01□□□□□ -1.29
R3HDM1-216ENST00000483065 RCCD1A6NED2 376 aa7□□□□□ -1.29
R3HDM1-216ENST00000483065 FOSBP53539 338 aa7□□□□□ -1.29
R3HDM1-216ENST00000483065 LCE3BQ5TA77 95 aa7□□□□□ -1.29
R3HDM1-216ENST00000483065 VPS37DQ86XT2 251 aa7□□□□□ -1.29
R3HDM1-216ENST00000483065 NT5DC4Q86YG4 428 aa7□□□□□ -1.29
R3HDM1-216ENST00000483065 BCL2L12Q9HB09 334 aa7□□□□□ -1.29
R3HDM1-216ENST00000483065 AAASQ9NRG9 546 aa7□□□□□ -1.29
R3HDM1-216ENST00000483065 SUGT1Q9Y2Z0 365 aa7□□□□□ -1.29
R3HDM1-216ENST00000483065 ST8SIA5O15466 376 aa6.99□□□□□ -1.29
R3HDM1-216ENST00000483065 DNAJB2P25686 324 aa6.99□□□□□ -1.29
R3HDM1-216ENST00000483065 HSD3B2P26439 372 aa6.99□□□□□ -1.29
R3HDM1-216ENST00000483065 FAM69CQ0P6D2 419 aa6.99□□□□□ -1.29
R3HDM1-216ENST00000483065 NFE2L2Q16236 605 aa6.99□□□□□ -1.29
R3HDM1-216ENST00000483065 LRRN4Q8WUT4 740 aa6.99□□□□□ -1.29
R3HDM1-216ENST00000483065 TINF2Q9BSI4 451 aa6.99□□□□□ -1.29
R3HDM1-216ENST00000483065 ZSWIM4Q9H7M6 989 aa6.99□□□□□ -1.29
R3HDM1-216ENST00000483065 TBX22Q9Y458 520 aa6.99□□□□□ -1.29
R3HDM1-216ENST00000483065 PCDHGA10Q9Y5H3 936 aa6.99□□□□□ -1.29
R3HDM1-216ENST00000483065 PRSS12P56730 875 aa6.98□□□□□ -1.29
R3HDM1-216ENST00000483065 GRIPAP1Q4V328 841 aa6.98□□□□□ -1.29
R3HDM1-216ENST00000483065 CRTC2Q53ET0 693 aaPredicted RBP6.98□□□□□ -1.29
R3HDM1-216ENST00000483065 RDH13Q8NBN7 331 aa6.98□□□□□ -1.29
R3HDM1-216ENST00000483065 DHX38Q92620 1227 aaKnown RBP6.98□□□□□ -1.29
R3HDM1-216ENST00000483065 JPH4Q96JJ6 628 aa6.98□□□□□ -1.29
R3HDM1-216ENST00000483065 SPACA7Q96KW9 195 aa6.98□□□□□ -1.29
R3HDM1-216ENST00000483065 GMLQ99445 158 aa6.98□□□□□ -1.29
R3HDM1-216ENST00000483065 PRDM16Q9HAZ2 1276 aa6.98□□□□□ -1.29
R3HDM1-216ENST00000483065 ZBBXA8MT70 800 aa6.97□□□□□ -1.29
R3HDM1-216ENST00000483065 HOXA2O43364 376 aa6.97□□□□□ -1.29
R3HDM1-216ENST00000483065 SETQ01105 290 aaPredicted RBP6.97□□□□□ -1.29
R3HDM1-216ENST00000483065 FKBP4Q02790 459 aaKnown RBP eCLIP6.97□□□□□ -1.29
R3HDM1-216ENST00000483065 RBL2Q08999 1139 aa6.97□□□□□ -1.29
R3HDM1-216ENST00000483065 SLFNL1Q499Z3 407 aa6.97□□□□□ -1.29
R3HDM1-216ENST00000483065 HSP90AB4PQ58FF6 505 aa6.97□□□□□ -1.29
R3HDM1-216ENST00000483065 C9orf131Q5VYM1 1079 aa6.97□□□□□ -1.29
R3HDM1-216ENST00000483065 ZSCAN1Q8NBB4 408 aa6.97□□□□□ -1.29
R3HDM1-216ENST00000483065 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.97□□□□□ -1.29
R3HDM1-216ENST00000483065 ARID5AQ03989 594 aa6.96□□□□□ -1.3
R3HDM1-216ENST00000483065 RAD51AP2Q09MP3 1159 aa6.96□□□□□ -1.3
R3HDM1-216ENST00000483065 EML3Q32P44 896 aa6.96□□□□□ -1.3
R3HDM1-216ENST00000483065 C6orf132Q5T0Z8 1188 aa6.96□□□□□ -1.3
R3HDM1-216ENST00000483065 TAS1R3Q7RTX0 852 aa6.96□□□□□ -1.3
R3HDM1-216ENST00000483065 PMFBP1Q8TBY8 1022 aa6.96□□□□□ -1.3
R3HDM1-216ENST00000483065 KRTAP4-8A0A0G2JLE6 195 aa6.95□□□□□ -1.3
R3HDM1-216ENST00000483065 PPP1R12AO14974 1030 aaPredicted RBP6.95□□□□□ -1.3
R3HDM1-216ENST00000483065 SORBS3O60504 671 aa6.95□□□□□ -1.3
R3HDM1-216ENST00000483065 STK10O94804 968 aaKnown RBP6.95□□□□□ -1.3
R3HDM1-216ENST00000483065 ZNF76P36508 570 aa6.95□□□□□ -1.3
R3HDM1-216ENST00000483065 TAGLNQ01995 201 aaKnown RBP6.95□□□□□ -1.3
R3HDM1-216ENST00000483065 MAP7D1Q3KQU3 841 aa6.95□□□□□ -1.3
R3HDM1-216ENST00000483065 SMC5Q8IY18 1101 aa6.95□□□□□ -1.3
R3HDM1-216ENST00000483065 UBA5Q9GZZ9 404 aa6.95□□□□□ -1.3
R3HDM1-216ENST00000483065 OSBPL2Q9H1P3 480 aa6.95□□□□□ -1.3
R3HDM1-216ENST00000483065 IQSEC3Q9UPP2 1182 aaPredicted RBP6.95□□□□□ -1.3
R3HDM1-216ENST00000483065 DNAJA1P31689 397 aaKnown RBP6.94□□□□□ -1.3
R3HDM1-216ENST00000483065 DPYDQ12882 1025 aa6.94□□□□□ -1.3
R3HDM1-216ENST00000483065 NR6A1Q15406 480 aa6.94□□□□□ -1.3
R3HDM1-216ENST00000483065 CDCA7LQ96GN5 454 aa6.94□□□□□ -1.3
R3HDM1-216ENST00000483065 MRFAP1L1Q96HT8 127 aa6.94□□□□□ -1.3
R3HDM1-216ENST00000483065 CITED4Q96RK1 184 aa6.94□□□□□ -1.3
R3HDM1-216ENST00000483065 KRTAP9-9Q9BYP9 154 aa6.94□□□□□ -1.3
R3HDM1-216ENST00000483065 KRTAP9-4Q9BYQ2 154 aa6.94□□□□□ -1.3
R3HDM1-216ENST00000483065 CXXC1Q9P0U4 656 aaPredicted RBP6.94□□□□□ -1.3
R3HDM1-216ENST00000483065 C11orf95C9JLR9 678 aaPredicted RBP6.93□□□□□ -1.3
R3HDM1-216ENST00000483065 NDUFB5O43674 189 aa6.93□□□□□ -1.3
R3HDM1-216ENST00000483065 PTCD1O75127 700 aaKnown RBP6.93□□□□□ -1.3
R3HDM1-216ENST00000483065 FMNL1O95466 1100 aaPredicted RBP6.93□□□□□ -1.3
R3HDM1-216ENST00000483065 NEFLP07196 543 aa6.93□□□□□ -1.3
R3HDM1-216ENST00000483065 ATP2B2Q01814 1243 aa6.93□□□□□ -1.3
R3HDM1-216ENST00000483065 ZNF211Q13398 564 aaPredicted RBP6.93□□□□□ -1.3
R3HDM1-216ENST00000483065 ZNF746Q6NUN9 644 aaPredicted RBP6.93□□□□□ -1.3
R3HDM1-216ENST00000483065 DEPDC4Q8N2C3 294 aa6.93□□□□□ -1.3
R3HDM1-216ENST00000483065 SLAIN2Q9P270 581 aa6.93□□□□□ -1.3
R3HDM1-216ENST00000483065 KLHL42Q9P2K6 505 aa6.93□□□□□ -1.3
R3HDM1-216ENST00000483065 VTI1BQ9UEU0 232 aa6.93□□□□□ -1.3
R3HDM1-216ENST00000483065 FAM187AA6NFU0 413 aa6.92□□□□□ -1.3
R3HDM1-216ENST00000483065 NBPF26B4DH59 902 aa6.92□□□□□ -1.3
R3HDM1-216ENST00000483065 C6orf229H3BNL8 230 aa6.92□□□□□ -1.3
R3HDM1-216ENST00000483065 PIK3CDO00329 1044 aa6.92□□□□□ -1.3
R3HDM1-216ENST00000483065 TERTO14746 1132 aaKnown RBP6.92□□□□□ -1.3
R3HDM1-216ENST00000483065 PRPF40AO75400 957 aaKnown RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms