RNA–Protein interactions for RNA: ENST00000482987.1

EPHB3-203, Transcript of EPH receptor B3, humanhuman

TSL 3

Gene EPHB3, Length 482 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-203ENST00000482987 CDCA8Q53HL2 280 aa16.05■□□□□ 0.16
EPHB3-203ENST00000482987 AKT1S1Q96B36 256 aa16.05■□□□□ 0.16
EPHB3-203ENST00000482987 INSRP06213 1382 aa16.04■□□□□ 0.16
EPHB3-203ENST00000482987 YY1P25490 414 aa16.04■□□□□ 0.16
EPHB3-203ENST00000482987 SYTL4Q96C24 671 aaPredicted RBP16.04■□□□□ 0.16
EPHB3-203ENST00000482987 FHDC1Q9C0D6 1143 aaPredicted RBP16.04■□□□□ 0.16
EPHB3-203ENST00000482987 SHANK3Q9BYB0 1731 aa16.04■□□□□ 0.16
EPHB3-203ENST00000482987 NSD3Q9BZ95 1437 aa16.03■□□□□ 0.16
EPHB3-203ENST00000482987 RGPD2P0DJD1 1756 aa16.03■□□□□ 0.16
EPHB3-203ENST00000482987 FLT4P35916 1363 aa16.03■□□□□ 0.16
EPHB3-203ENST00000482987 SLC27A3Q5K4L6 730 aa16.03■□□□□ 0.16
EPHB3-203ENST00000482987 TIMELESSQ9UNS1 1208 aa16.03■□□□□ 0.16
EPHB3-203ENST00000482987 SYT17Q9BSW7 474 aa16.02■□□□□ 0.16
EPHB3-203ENST00000482987 EMILIN1Q9Y6C2 1016 aa16.02■□□□□ 0.16
EPHB3-203ENST00000482987 SMG6Q86US8 1419 aaKnown RBP16.02■□□□□ 0.15
EPHB3-203ENST00000482987 KIF24Q5T7B8 1368 aa16.01■□□□□ 0.15
EPHB3-203ENST00000482987 CGNL1Q0VF96 1302 aa16.01■□□□□ 0.15
EPHB3-203ENST00000482987 RAPGEF4Q8WZA2 1011 aa16.01■□□□□ 0.15
EPHB3-203ENST00000482987 DOT1LQ8TEK3 1739 aa16.01■□□□□ 0.15
EPHB3-203ENST00000482987 PNPLA7Q6ZV29 1317 aa16■□□□□ 0.15
EPHB3-203ENST00000482987 PCGF6Q9BYE7 350 aa16■□□□□ 0.15
EPHB3-203ENST00000482987 CLSPNQ9HAW4 1339 aa15.99■□□□□ 0.15
EPHB3-203ENST00000482987 ARXQ96QS3 562 aa15.99■□□□□ 0.15
EPHB3-203ENST00000482987 KIF20BQ96Q89 1820 aa15.98■□□□□ 0.15
EPHB3-203ENST00000482987 DCAF8L1A6NGE4 600 aa15.98■□□□□ 0.15
EPHB3-203ENST00000482987 TATP17735 454 aaPredicted RBP15.98■□□□□ 0.15
EPHB3-203ENST00000482987 NCAPD2Q15021 1401 aa15.97■□□□□ 0.15
EPHB3-203ENST00000482987 CYP27B1O15528 508 aa15.97■□□□□ 0.15
EPHB3-203ENST00000482987 TFCP2L1Q9NZI6 479 aa15.97■□□□□ 0.15
EPHB3-203ENST00000482987 CCNL1Q9UK58 526 aaPredicted RBP15.97■□□□□ 0.15
EPHB3-203ENST00000482987 PCDH11XQ9BZA7 1347 aa15.96■□□□□ 0.15
EPHB3-203ENST00000482987 PCDH11YQ9BZA8 1340 aa15.96■□□□□ 0.15
EPHB3-203ENST00000482987 SLC16A10Q8TF71 515 aa15.96■□□□□ 0.15
EPHB3-203ENST00000482987 MAP3K5Q99683 1374 aa15.96■□□□□ 0.15
EPHB3-203ENST00000482987 LY75O60449 1722 aa15.95■□□□□ 0.14
EPHB3-203ENST00000482987 PPM1GO15355 546 aaPredicted RBP15.95■□□□□ 0.14
EPHB3-203ENST00000482987 WASHC2AQ641Q2 1341 aa15.94■□□□□ 0.14
EPHB3-203ENST00000482987 POLR3GLQ9BT43 218 aa15.93■□□□□ 0.14
EPHB3-203ENST00000482987 POLKQ9UBT6 870 aa15.93■□□□□ 0.14
EPHB3-203ENST00000482987 GOLGB1Q14789 3259 aaKnown RBP15.93■□□□□ 0.14
EPHB3-203ENST00000482987 KAT6BQ8WYB5 2073 aa15.93■□□□□ 0.14
EPHB3-203ENST00000482987 PALLDQ8WX93 1383 aa15.92■□□□□ 0.14
EPHB3-203ENST00000482987 QSER1Q2KHR3 1735 aa15.92■□□□□ 0.14
EPHB3-203ENST00000482987 MPRIPQ6WCQ1 1025 aa15.92■□□□□ 0.14
EPHB3-203ENST00000482987 EYA1Q99502 592 aa15.92■□□□□ 0.14
EPHB3-203ENST00000482987 TUBGCP6Q96RT7 1819 aa15.91■□□□□ 0.14
EPHB3-203ENST00000482987 ANKRD26Q9UPS8 1709 aa15.91■□□□□ 0.14
EPHB3-203ENST00000482987 HSPA5P11021 654 aaKnown RBP15.91■□□□□ 0.14
EPHB3-203ENST00000482987 COL23A1Q86Y22 540 aaPredicted RBP15.91■□□□□ 0.14
EPHB3-203ENST00000482987 POLD1P28340 1107 aa15.9■□□□□ 0.14
EPHB3-203ENST00000482987 NKX1-1Q15270 411 aaPredicted RBP15.9■□□□□ 0.14
EPHB3-203ENST00000482987 TOGARAM1Q9Y4F4 1720 aa15.9■□□□□ 0.14
EPHB3-203ENST00000482987 COL24A1Q17RW2 1714 aa15.89■□□□□ 0.13
EPHB3-203ENST00000482987 PKD1L3Q7Z443 1732 aa15.89■□□□□ 0.13
EPHB3-203ENST00000482987 TNNT2P45379 298 aaPredicted RBP15.89■□□□□ 0.13
EPHB3-203ENST00000482987 PIGBQ92521 554 aa15.89■□□□□ 0.13
EPHB3-203ENST00000482987 EIF4G2P78344 907 aaKnown RBP eCLIP15.88■□□□□ 0.13
EPHB3-203ENST00000482987 EIF4A2Q14240 407 aaKnown RBP15.88■□□□□ 0.13
EPHB3-203ENST00000482987 AMIGO3Q86WK7 504 aa15.88■□□□□ 0.13
EPHB3-203ENST00000482987 KLHL34Q8N239 644 aa15.88■□□□□ 0.13
EPHB3-203ENST00000482987 NLGN2Q8NFZ4 835 aa15.88■□□□□ 0.13
EPHB3-203ENST00000482987 MSH5O43196 834 aa15.87■□□□□ 0.13
EPHB3-203ENST00000482987 MSL1Q68DK7 614 aa15.87■□□□□ 0.13
EPHB3-203ENST00000482987 ZNF784Q8NCA9 323 aaPredicted RBP15.87■□□□□ 0.13
EPHB3-203ENST00000482987 PANK3Q9H999 370 aa15.87■□□□□ 0.13
EPHB3-203ENST00000482987 SPG7Q9UQ90 795 aa15.87■□□□□ 0.13
EPHB3-203ENST00000482987 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.86■□□□□ 0.13
EPHB3-203ENST00000482987 PHKG2P15735 406 aa15.85■□□□□ 0.13
EPHB3-203ENST00000482987 SMIM5Q71RC9 77 aa15.85■□□□□ 0.13
EPHB3-203ENST00000482987 SMARCC1Q92922 1105 aaPredicted RBP15.85■□□□□ 0.13
EPHB3-203ENST00000482987 C5P01031 1676 aa15.85■□□□□ 0.13
EPHB3-203ENST00000482987 GPR162Q16538 588 aa15.84■□□□□ 0.13
EPHB3-203ENST00000482987 IGSF1Q8N6C5 1336 aa15.84■□□□□ 0.13
EPHB3-203ENST00000482987 IFNL2Q8IZJ0 200 aa15.83■□□□□ 0.12
EPHB3-203ENST00000482987 CCER1Q8TC90 406 aaPredicted RBP15.83■□□□□ 0.12
EPHB3-203ENST00000482987 ASAP1Q9ULH1 1129 aa15.83■□□□□ 0.12
EPHB3-203ENST00000482987 LOC102724428A0A0B4J2F2 783 aa15.82■□□□□ 0.12
EPHB3-203ENST00000482987 SIK1P57059 783 aa15.82■□□□□ 0.12
EPHB3-203ENST00000482987 LINC00116Q8NCU8 138 aa15.82■□□□□ 0.12
EPHB3-203ENST00000482987 TMOD3Q9NYL9 352 aa15.82■□□□□ 0.12
EPHB3-203ENST00000482987 C4BP0C0L5 1744 aa15.82■□□□□ 0.12
EPHB3-203ENST00000482987 MAP2P11137 1827 aaKnown RBP15.81■□□□□ 0.12
EPHB3-203ENST00000482987 ITPK1Q13572 414 aa15.81■□□□□ 0.12
EPHB3-203ENST00000482987 PELP1Q8IZL8 1130 aaKnown RBP15.81■□□□□ 0.12
EPHB3-203ENST00000482987 FLAD1Q8NFF5 587 aa15.81■□□□□ 0.12
EPHB3-203ENST00000482987 AK7Q96M32 723 aa15.81■□□□□ 0.12
EPHB3-203ENST00000482987 ITGB4P16144 1822 aa15.8■□□□□ 0.12
EPHB3-203ENST00000482987 PLEKHG2Q9H7P9 1386 aa15.8■□□□□ 0.12
EPHB3-203ENST00000482987 PHF14O94880 888 aa15.8■□□□□ 0.12
EPHB3-203ENST00000482987 YBX3P16989 372 aaKnown RBP eCLIP15.8■□□□□ 0.12
EPHB3-203ENST00000482987 ATG3Q9NT62 314 aa15.8■□□□□ 0.12
EPHB3-203ENST00000482987 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.79■□□□□ 0.12
EPHB3-203ENST00000482987 TAF1LQ8IZX4 1826 aa15.79■□□□□ 0.12
EPHB3-203ENST00000482987 HMGB2P26583 209 aaKnown RBP15.78■□□□□ 0.12
EPHB3-203ENST00000482987 AEBP1Q8IUX7 1158 aa15.78■□□□□ 0.12
EPHB3-203ENST00000482987 CHD4Q14839 1912 aa15.78■□□□□ 0.12
EPHB3-203ENST00000482987 KDRP35968 1356 aa15.77■□□□□ 0.12
EPHB3-203ENST00000482987 SSFA2P28290 1259 aa15.77■□□□□ 0.12
EPHB3-203ENST00000482987 MORC1Q86VD1 984 aa15.77■□□□□ 0.12
EPHB3-203ENST00000482987 SLC4A9Q96Q91 983 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms