RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 USP17L2Q6R6M4 530 aa6.23□□□□□ -1.41
CLCC1-209ENST00000482889 USP17L1Q7RTZ2 530 aa6.23□□□□□ -1.41
CLCC1-209ENST00000482889 ZNF592Q92610 1267 aa6.23□□□□□ -1.41
CLCC1-209ENST00000482889 CEP126Q9P2H0 1117 aa6.23□□□□□ -1.41
CLCC1-209ENST00000482889 USP17L5A8MUK1 530 aa6.22□□□□□ -1.41
CLCC1-209ENST00000482889 CAPN5O15484 640 aaPredicted RBP6.22□□□□□ -1.41
CLCC1-209ENST00000482889 TIMP2P16035 220 aa6.22□□□□□ -1.41
CLCC1-209ENST00000482889 FSHRP23945 695 aa6.22□□□□□ -1.41
CLCC1-209ENST00000482889 MCCD1P59942 119 aaPredicted RBP6.22□□□□□ -1.41
CLCC1-209ENST00000482889 ELOAQ14241 798 aaKnown RBP6.22□□□□□ -1.41
CLCC1-209ENST00000482889 NBPF20Q3BBV1 942 aa6.22□□□□□ -1.41
CLCC1-209ENST00000482889 NOM1Q5C9Z4 860 aaKnown RBP6.22□□□□□ -1.41
CLCC1-209ENST00000482889 SND1Q7KZF4 910 aaKnown RBP eCLIP6.22□□□□□ -1.417e-8■□□□□ 10.7
CLCC1-209ENST00000482889 TXNDC2Q86VQ3 553 aa6.22□□□□□ -1.41
CLCC1-209ENST00000482889 KCTD15Q96SI1 283 aaPredicted RBP6.22□□□□□ -1.41
CLCC1-209ENST00000482889 MKRN1Q9UHC7 482 aaKnown RBP6.22□□□□□ -1.41
CLCC1-209ENST00000482889 NOVA2Q9UNW9 492 aaKnown RBP6.22□□□□□ -1.41
CLCC1-209ENST00000482889 WDR4P57081 412 aaKnown RBP6.21□□□□□ -1.42
CLCC1-209ENST00000482889 DZIP3Q86Y13 1208 aaKnown RBP6.21□□□□□ -1.42
CLCC1-209ENST00000482889 CCDC116Q8IYX3 515 aa6.21□□□□□ -1.42
CLCC1-209ENST00000482889 ATP13A2Q9NQ11 1180 aa6.21□□□□□ -1.42
CLCC1-209ENST00000482889 DACH1Q9UI36 760 aa6.21□□□□□ -1.42
CLCC1-209ENST00000482889 GNEQ9Y223 722 aaKnown RBP6.21□□□□□ -1.42
CLCC1-209ENST00000482889 EMILIN1Q9Y6C2 1016 aa6.21□□□□□ -1.42
CLCC1-209ENST00000482889 ESPNB1AK53 854 aa6.2□□□□□ -1.42
CLCC1-209ENST00000482889 DHX9Q08211 1270 aaKnown RBP6.2□□□□□ -1.42
CLCC1-209ENST00000482889 PTK7Q13308 1070 aa6.2□□□□□ -1.42
CLCC1-209ENST00000482889 CCDC125Q86Z20 511 aa6.2□□□□□ -1.42
CLCC1-209ENST00000482889 PLEKHM2Q8IWE5 1019 aa6.2□□□□□ -1.42
CLCC1-209ENST00000482889 SEPT12Q8IYM1 358 aa6.2□□□□□ -1.42
CLCC1-209ENST00000482889 NFATC2IPQ8NCF5 419 aa6.2□□□□□ -1.42
CLCC1-209ENST00000482889 SENP2Q9HC62 589 aa6.2□□□□□ -1.42
CLCC1-209ENST00000482889 UNCXA6NJT0 531 aa6.19□□□□□ -1.42
CLCC1-209ENST00000482889 USP17L15C9J2P7 530 aa6.19□□□□□ -1.42
CLCC1-209ENST00000482889 PATL2C9JE40 543 aaKnown RBP6.19□□□□□ -1.42
CLCC1-209ENST00000482889 USP17L10C9JJH3 530 aa6.19□□□□□ -1.42
CLCC1-209ENST00000482889 USP17L13C9JLJ4 530 aa6.19□□□□□ -1.42
CLCC1-209ENST00000482889 USP17L12C9JPN9 530 aa6.19□□□□□ -1.42
CLCC1-209ENST00000482889 USP17L11C9JVI0 530 aa6.19□□□□□ -1.42
CLCC1-209ENST00000482889 USP17L21D6R901 530 aa6.19□□□□□ -1.42
CLCC1-209ENST00000482889 USP17L18D6R9N7 530 aa6.19□□□□□ -1.42
CLCC1-209ENST00000482889 USP17L22D6RA61 530 aa6.19□□□□□ -1.42
CLCC1-209ENST00000482889 USP17L17D6RBQ6 530 aa6.19□□□□□ -1.42
CLCC1-209ENST00000482889 USP17L19D6RCP7 530 aa6.19□□□□□ -1.42
CLCC1-209ENST00000482889 USP17L20D6RJB6 530 aa6.19□□□□□ -1.42
CLCC1-209ENST00000482889 SSFA2P28290 1259 aa6.19□□□□□ -1.42
CLCC1-209ENST00000482889 USP17L24Q0WX57 530 aa6.19□□□□□ -1.42
CLCC1-209ENST00000482889 NCOA4Q13772 614 aa6.19□□□□□ -1.42
CLCC1-209ENST00000482889 CCDC27Q2M243 656 aa6.19□□□□□ -1.42
CLCC1-209ENST00000482889 INTS6LQ5JSJ4 861 aaKnown RBP6.19□□□□□ -1.42
CLCC1-209ENST00000482889 ITPKCQ96DU7 683 aa6.19□□□□□ -1.42
CLCC1-209ENST00000482889 PGPEP1Q9NXJ5 209 aa6.19□□□□□ -1.42
CLCC1-209ENST00000482889 CHIC2Q9UKJ5 165 aa6.19□□□□□ -1.42
CLCC1-209ENST00000482889 ZBTB7BO15156 539 aaPredicted RBP6.18□□□□□ -1.42
CLCC1-209ENST00000482889 DKK1O94907 266 aa6.18□□□□□ -1.42
CLCC1-209ENST00000482889 ZIC2O95409 532 aaPredicted RBP6.18□□□□□ -1.42
CLCC1-209ENST00000482889 PPP1R26Q5T8A7 1209 aaPredicted RBP6.18□□□□□ -1.42
CLCC1-209ENST00000482889 KIFC2Q96AC6 838 aa6.18□□□□□ -1.42
CLCC1-209ENST00000482889 ZFAND3Q9H8U3 227 aa6.18□□□□□ -1.42
CLCC1-209ENST00000482889 PCDHB9Q9Y5E1 797 aa6.18□□□□□ -1.42
CLCC1-209ENST00000482889 FAM196BA6NMK8 535 aa6.17□□□□□ -1.42
CLCC1-209ENST00000482889 LGR5O75473 907 aa6.17□□□□□ -1.42
CLCC1-209ENST00000482889 RASA1P20936 1047 aa6.17□□□□□ -1.42
CLCC1-209ENST00000482889 CLDN10P78369 228 aa6.17□□□□□ -1.42
CLCC1-209ENST00000482889 TRIM46Q7Z4K8 759 aa6.17□□□□□ -1.42
CLCC1-209ENST00000482889 MEIOBQ8N635 442 aa6.17□□□□□ -1.42
CLCC1-209ENST00000482889 PLPP7Q8NBV4 271 aa6.17□□□□□ -1.42
CLCC1-209ENST00000482889 TRIM52Q96A61 297 aa6.17□□□□□ -1.42
CLCC1-209ENST00000482889 TRIM47Q96LD4 638 aa6.17□□□□□ -1.42
CLCC1-209ENST00000482889 CCDC85AQ96PX6 553 aaPredicted RBP6.17□□□□□ -1.42
CLCC1-209ENST00000482889 GMPR2Q9P2T1 348 aaKnown RBP6.17□□□□□ -1.42
CLCC1-209ENST00000482889 KIAA1024Q9UPX6 916 aa6.17□□□□□ -1.42
CLCC1-209ENST00000482889 RNF20Q5VTR2 975 aa6.16□□□□□ -1.42
CLCC1-209ENST00000482889 MRPL14Q6P1L8 145 aaKnown RBP6.16□□□□□ -1.42
CLCC1-209ENST00000482889 TREML4Q6UXN2 200 aa6.16□□□□□ -1.42
CLCC1-209ENST00000482889 RNF135Q8IUD6 432 aa6.16□□□□□ -1.42
CLCC1-209ENST00000482889 LOC105371045A0A1W2PR82 267 aa6.15□□□□□ -1.42
CLCC1-209ENST00000482889 IGSF3O75054 1194 aa6.15□□□□□ -1.42
CLCC1-209ENST00000482889 SERPINB4P48594 390 aa6.15□□□□□ -1.42
CLCC1-209ENST00000482889 DPYDQ12882 1025 aa6.15□□□□□ -1.42
CLCC1-209ENST00000482889 Q6ZVU0 165 aa6.15□□□□□ -1.42
CLCC1-209ENST00000482889 ANKMY2Q8IV38 441 aa6.15□□□□□ -1.42
CLCC1-209ENST00000482889 CDCA7Q9BWT1 371 aaPredicted RBP6.15□□□□□ -1.42
CLCC1-209ENST00000482889 C11orf95C9JLR9 678 aaPredicted RBP6.14□□□□□ -1.43
CLCC1-209ENST00000482889 BMP1P13497 986 aa6.14□□□□□ -1.43
CLCC1-209ENST00000482889 SCARF1Q14162 830 aa6.14□□□□□ -1.43
CLCC1-209ENST00000482889 SLFNL1Q499Z3 407 aa6.14□□□□□ -1.43
CLCC1-209ENST00000482889 DNAJC14Q6Y2X3 702 aaPredicted RBP6.14□□□□□ -1.43
CLCC1-209ENST00000482889 OGFOD1Q8N543 542 aa6.14□□□□□ -1.43
CLCC1-209ENST00000482889 FAM200AQ8TCP9 573 aa6.14□□□□□ -1.43
CLCC1-209ENST00000482889 CLP1Q92989 425 aaKnown RBP6.14□□□□□ -1.43
CLCC1-209ENST00000482889 ERVH48-1M5A8F1 160 aa6.13□□□□□ -1.43
CLCC1-209ENST00000482889 GIGYF1O75420 1035 aaPredicted RBP6.13□□□□□ -1.43
CLCC1-209ENST00000482889 LARP1Q6PKG0 1096 aaKnown RBP6.13□□□□□ -1.43
CLCC1-209ENST00000482889 LINC00528Q8N1L1 170 aa6.13□□□□□ -1.43
CLCC1-209ENST00000482889 GAS2L2Q8NHY3 880 aa6.13□□□□□ -1.43
CLCC1-209ENST00000482889 ZNF594Q96JF6 807 aaPredicted RBP6.13□□□□□ -1.43
CLCC1-209ENST00000482889 ZFP42Q96MM3 310 aa6.13□□□□□ -1.43
CLCC1-209ENST00000482889 TSEN34Q9BSV6 310 aaKnown RBP6.13□□□□□ -1.43
CLCC1-209ENST00000482889 LILRA1O75019 489 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms