RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 NLGN2Q8NFZ4 835 aa18.1■□□□□ 0.49
TMEM54-206ENST00000482771 CCNL1Q9UK58 526 aaPredicted RBP18.09■□□□□ 0.49
TMEM54-206ENST00000482771 LTN1O94822 1766 aa18.09■□□□□ 0.49
TMEM54-206ENST00000482771 ANKRD36BQ8N2N9 1353 aa18.08■□□□□ 0.49
TMEM54-206ENST00000482771 COL23A1Q86Y22 540 aaPredicted RBP18.07■□□□□ 0.48
TMEM54-206ENST00000482771 ST20-MTHFSA0A0A6YYL1 179 aa18.06■□□□□ 0.48
TMEM54-206ENST00000482771 NBPF6Q5VWK0 638 aa18.06■□□□□ 0.48
TMEM54-206ENST00000482771 NBPF4Q96M43 638 aa18.06■□□□□ 0.48
TMEM54-206ENST00000482771 USP54Q70EL1 1684 aa18.06■□□□□ 0.48
TMEM54-206ENST00000482771 GIGYF1O75420 1035 aaPredicted RBP18.05■□□□□ 0.48
TMEM54-206ENST00000482771 TESK2Q96S53 571 aa18.05■□□□□ 0.48
TMEM54-206ENST00000482771 GRIN3BO60391 1043 aa18.04■□□□□ 0.48
TMEM54-206ENST00000482771 RRS1Q15050 365 aaKnown RBP18.04■□□□□ 0.48
TMEM54-206ENST00000482771 USHBP1Q8N6Y0 703 aa18.04■□□□□ 0.48
TMEM54-206ENST00000482771 NSD2O96028 1365 aa18.04■□□□□ 0.48
TMEM54-206ENST00000482771 YBX3P16989 372 aaKnown RBP eCLIP18.03■□□□□ 0.489e-6■□□□□ 10.4
TMEM54-206ENST00000482771 MSL1Q68DK7 614 aa18.03■□□□□ 0.48
TMEM54-206ENST00000482771 GOLGB1Q14789 3259 aaKnown RBP18.03■□□□□ 0.48
TMEM54-206ENST00000482771 USP47Q96K76 1375 aa18.03■□□□□ 0.48
TMEM54-206ENST00000482771 RAPGEF4Q8WZA2 1011 aa18.02■□□□□ 0.48
TMEM54-206ENST00000482771 TONSLQ96HA7 1378 aa18.02■□□□□ 0.47
TMEM54-206ENST00000482771 FYB1O15117 783 aa18.01■□□□□ 0.47
TMEM54-206ENST00000482771 SLC24A1O60721 1099 aa18.01■□□□□ 0.47
TMEM54-206ENST00000482771 GGNBP2Q9H3C7 697 aa18.01■□□□□ 0.47
TMEM54-206ENST00000482771 TATP17735 454 aaPredicted RBP18■□□□□ 0.47
TMEM54-206ENST00000482771 CGNL1Q0VF96 1302 aa17.99■□□□□ 0.47
TMEM54-206ENST00000482771 MEGF6O75095 1541 aa17.99■□□□□ 0.47
TMEM54-206ENST00000482771 MPRIPQ6WCQ1 1025 aa17.99■□□□□ 0.47
TMEM54-206ENST00000482771 HSP90AB2PQ58FF8 381 aa17.98■□□□□ 0.47
TMEM54-206ENST00000482771 HMGB2P26583 209 aaKnown RBP17.96■□□□□ 0.47
TMEM54-206ENST00000482771 FLAD1Q8NFF5 587 aa17.96■□□□□ 0.47
TMEM54-206ENST00000482771 CD2APQ9Y5K6 639 aa17.96■□□□□ 0.47
TMEM54-206ENST00000482771 QSER1Q2KHR3 1735 aa17.95■□□□□ 0.46
TMEM54-206ENST00000482771 RTL1A6NKG5 1358 aa17.94■□□□□ 0.46
TMEM54-206ENST00000482771 FAM208AQ9UK61 1670 aaKnown RBP17.94■□□□□ 0.46
TMEM54-206ENST00000482771 COL24A1Q17RW2 1714 aa17.94■□□□□ 0.46
TMEM54-206ENST00000482771 RGPD2P0DJD1 1756 aa17.94■□□□□ 0.46
TMEM54-206ENST00000482771 LY75O60449 1722 aa17.93■□□□□ 0.46
TMEM54-206ENST00000482771 DOT1LQ8TEK3 1739 aa17.93■□□□□ 0.46
TMEM54-206ENST00000482771 CYP27B1O15528 508 aa17.93■□□□□ 0.46
TMEM54-206ENST00000482771 TMF1P82094 1093 aa17.93■□□□□ 0.46
TMEM54-206ENST00000482771 PCDH11XQ9BZA7 1347 aa17.93■□□□□ 0.46
TMEM54-206ENST00000482771 PCDH11YQ9BZA8 1340 aa17.93■□□□□ 0.46
TMEM54-206ENST00000482771 TUBGCP6Q96RT7 1819 aa17.93■□□□□ 0.46
TMEM54-206ENST00000482771 PALLDQ8WX93 1383 aa17.92■□□□□ 0.46
TMEM54-206ENST00000482771 SMG6Q86US8 1419 aaKnown RBP17.92■□□□□ 0.46
TMEM54-206ENST00000482771 SMIM5Q71RC9 77 aa17.92■□□□□ 0.46
TMEM54-206ENST00000482771 SMARCC1Q92922 1105 aaPredicted RBP17.92■□□□□ 0.46
TMEM54-206ENST00000482771 PIGBQ92521 554 aa17.91■□□□□ 0.46
TMEM54-206ENST00000482771 AK7Q96M32 723 aa17.91■□□□□ 0.46
TMEM54-206ENST00000482771 INSRP06213 1382 aa17.91■□□□□ 0.46
TMEM54-206ENST00000482771 AMIGO3Q86WK7 504 aa17.9■□□□□ 0.46
TMEM54-206ENST00000482771 GPBP1L1Q9HC44 474 aaPredicted RBP17.9■□□□□ 0.46
TMEM54-206ENST00000482771 PHF14O94880 888 aa17.89■□□□□ 0.45
TMEM54-206ENST00000482771 WWC3Q9ULE0 1092 aa17.89■□□□□ 0.45
TMEM54-206ENST00000482771 SHANK3Q9BYB0 1731 aa17.89■□□□□ 0.45
TMEM54-206ENST00000482771 CEP350Q5VT06 3117 aa17.89■□□□□ 0.45
TMEM54-206ENST00000482771 ATP10DQ9P241 1426 aa17.89■□□□□ 0.45
TMEM54-206ENST00000482771 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.88■□□□□ 0.45
TMEM54-206ENST00000482771 PPM1GO15355 546 aaPredicted RBP17.88■□□□□ 0.45
TMEM54-206ENST00000482771 IFFO2Q5TF58 517 aa17.88■□□□□ 0.45
TMEM54-206ENST00000482771 ZNF526Q8TF50 670 aaPredicted RBP17.88■□□□□ 0.45
TMEM54-206ENST00000482771 EMILIN1Q9Y6C2 1016 aa17.88■□□□□ 0.45
TMEM54-206ENST00000482771 CARD14Q9BXL6 1004 aa17.87■□□□□ 0.45
TMEM54-206ENST00000482771 FLT4P35916 1363 aa17.87■□□□□ 0.45
TMEM54-206ENST00000482771 NKX1-1Q15270 411 aaPredicted RBP17.86■□□□□ 0.45
TMEM54-206ENST00000482771 CDCA8Q53HL2 280 aa17.86■□□□□ 0.45
TMEM54-206ENST00000482771 SPG7Q9UQ90 795 aa17.86■□□□□ 0.45
TMEM54-206ENST00000482771 LOC102724428A0A0B4J2F2 783 aa17.85■□□□□ 0.45
TMEM54-206ENST00000482771 SIK1P57059 783 aa17.85■□□□□ 0.45
TMEM54-206ENST00000482771 KIF24Q5T7B8 1368 aa17.84■□□□□ 0.45
TMEM54-206ENST00000482771 IGSF1Q8N6C5 1336 aa17.84■□□□□ 0.45
TMEM54-206ENST00000482771 LINC00116Q8NCU8 138 aa17.84■□□□□ 0.45
TMEM54-206ENST00000482771 ASAP1Q9ULH1 1129 aa17.83■□□□□ 0.44
TMEM54-206ENST00000482771 SSFA2P28290 1259 aa17.82■□□□□ 0.44
TMEM54-206ENST00000482771 ATP6V1AP38606 617 aa17.82■□□□□ 0.44
TMEM54-206ENST00000482771 EYA1Q99502 592 aa17.82■□□□□ 0.44
TMEM54-206ENST00000482771 TMOD3Q9NYL9 352 aa17.82■□□□□ 0.44
TMEM54-206ENST00000482771 C5P01031 1676 aa17.81■□□□□ 0.44
TMEM54-206ENST00000482771 GNPATO15228 680 aa17.81■□□□□ 0.44
TMEM54-206ENST00000482771 HSPA6P17066 643 aa17.81■□□□□ 0.44
TMEM54-206ENST00000482771 ITPK1Q13572 414 aa17.81■□□□□ 0.44
TMEM54-206ENST00000482771 WASHC2AQ641Q2 1341 aa17.8■□□□□ 0.44
TMEM54-206ENST00000482771 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.8■□□□□ 0.44
TMEM54-206ENST00000482771 IFNL2Q8IZJ0 200 aa17.79■□□□□ 0.44
TMEM54-206ENST00000482771 C4BP0C0L5 1744 aa17.78■□□□□ 0.44
TMEM54-206ENST00000482771 MMP10P09238 476 aa17.78■□□□□ 0.44
TMEM54-206ENST00000482771 PHKG2P15735 406 aa17.78■□□□□ 0.44
TMEM54-206ENST00000482771 ATG3Q9NT62 314 aa17.78■□□□□ 0.44
TMEM54-206ENST00000482771 ADCY9O60503 1353 aa17.78■□□□□ 0.44
TMEM54-206ENST00000482771 TAF1LQ8IZX4 1826 aa17.77■□□□□ 0.44
TMEM54-206ENST00000482771 TRAPPC3LQ5T215 181 aa17.77■□□□□ 0.44
TMEM54-206ENST00000482771 POLKQ9UBT6 870 aa17.77■□□□□ 0.44
TMEM54-206ENST00000482771 NSD3Q9BZ95 1437 aa17.77■□□□□ 0.44
TMEM54-206ENST00000482771 ITGB4P16144 1822 aa17.75■□□□□ 0.43
TMEM54-206ENST00000482771 A0A0G2JLW4 131 aa17.75■□□□□ 0.43
TMEM54-206ENST00000482771 KIF3CO14782 793 aa17.75■□□□□ 0.43
TMEM54-206ENST00000482771 TNNT2P45379 298 aaPredicted RBP17.74■□□□□ 0.43
TMEM54-206ENST00000482771 NLGN1Q8N2Q7 840 aa17.74■□□□□ 0.43
TMEM54-206ENST00000482771 RBM42Q9BTD8 480 aaKnown RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms