RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 DDB1Q16531 1140 aa26.54■■□□□ 1.84
TRAPPC12-220ENST00000482645 LRRC37A3O60309 1634 aa26.53■■□□□ 1.84
TRAPPC12-220ENST00000482645 OVOS2A0A0G2JMS6 1433 aa26.52■■□□□ 1.84
TRAPPC12-220ENST00000482645 EXOC5O00471 708 aa26.51■■□□□ 1.83
TRAPPC12-220ENST00000482645 PRKAR2BP31323 418 aa26.5■■□□□ 1.83
TRAPPC12-220ENST00000482645 BRWD3Q6RI45 1802 aa26.5■■□□□ 1.83
TRAPPC12-220ENST00000482645 PDE3BQ13370 1112 aa26.49■■□□□ 1.83
TRAPPC12-220ENST00000482645 RSPH6AQ9H0K4 717 aa26.49■■□□□ 1.83
TRAPPC12-220ENST00000482645 TNS2Q63HR2 1409 aa26.49■■□□□ 1.83
TRAPPC12-220ENST00000482645 ZCRB1Q8TBF4 217 aaKnown RBP26.49■■□□□ 1.83
TRAPPC12-220ENST00000482645 DDX54Q8TDD1 881 aaKnown RBP26.48■■□□□ 1.83
TRAPPC12-220ENST00000482645 ADAMTS8Q9UP79 889 aa26.48■■□□□ 1.83
TRAPPC12-220ENST00000482645 FCHSD2O94868 740 aa26.47■■□□□ 1.83
TRAPPC12-220ENST00000482645 KRT27Q7Z3Y8 459 aa26.46■■□□□ 1.83
TRAPPC12-220ENST00000482645 FAM182BQ5T319 152 aa26.45■■□□□ 1.83
TRAPPC12-220ENST00000482645 PNISRQ8TF01 805 aaKnown RBP26.45■■□□□ 1.83
TRAPPC12-220ENST00000482645 SPG7Q9UQ90 795 aa26.45■■□□□ 1.83
TRAPPC12-220ENST00000482645 PLEKHO1Q53GL0 409 aaPredicted RBP26.44■■□□□ 1.82
TRAPPC12-220ENST00000482645 CCDC146Q8IYE0 955 aa26.44■■□□□ 1.82
TRAPPC12-220ENST00000482645 FAM9BQ8IZU0 186 aa26.44■■□□□ 1.82
TRAPPC12-220ENST00000482645 PKD1L3Q7Z443 1732 aa26.44■■□□□ 1.82
TRAPPC12-220ENST00000482645 SHANK3Q9BYB0 1731 aa26.43■■□□□ 1.82
TRAPPC12-220ENST00000482645 NEFMP07197 916 aa26.43■■□□□ 1.82
TRAPPC12-220ENST00000482645 PCDH11XQ9BZA7 1347 aa26.42■■□□□ 1.82
TRAPPC12-220ENST00000482645 PCDH11YQ9BZA8 1340 aa26.42■■□□□ 1.82
TRAPPC12-220ENST00000482645 AMOTQ4VCS5 1084 aa26.42■■□□□ 1.82
TRAPPC12-220ENST00000482645 PHACTR3Q96KR7 559 aa26.42■■□□□ 1.82
TRAPPC12-220ENST00000482645 PNNQ9H307 717 aaKnown RBP26.42■■□□□ 1.82
TRAPPC12-220ENST00000482645 EP400Q96L91 3159 aa26.41■■□□□ 1.82
TRAPPC12-220ENST00000482645 MAPK8IP3Q9UPT6 1336 aa26.41■■□□□ 1.82
TRAPPC12-220ENST00000482645 ZNF530Q6P9A1 599 aaPredicted RBP26.41■■□□□ 1.82
TRAPPC12-220ENST00000482645 MARCH10Q8NA82 808 aaPredicted RBP26.41■■□□□ 1.82
TRAPPC12-220ENST00000482645 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.4■■□□□ 1.82
TRAPPC12-220ENST00000482645 MTHFSDQ2M296 383 aaKnown RBP26.39■■□□□ 1.82
TRAPPC12-220ENST00000482645 CYP27B1O15528 508 aa26.39■■□□□ 1.81
TRAPPC12-220ENST00000482645 ILDR2Q71H61 639 aa26.39■■□□□ 1.81
TRAPPC12-220ENST00000482645 PLEKHF1Q96S99 279 aa26.39■■□□□ 1.81
TRAPPC12-220ENST00000482645 C1orf141Q5JVX7 400 aa26.38■■□□□ 1.81
TRAPPC12-220ENST00000482645 PLEKHG2Q9H7P9 1386 aa26.37■■□□□ 1.81
TRAPPC12-220ENST00000482645 IFNL2Q8IZJ0 200 aa26.36■■□□□ 1.81
TRAPPC12-220ENST00000482645 PHKG2P15735 406 aa26.35■■□□□ 1.81
TRAPPC12-220ENST00000482645 GAS2L2Q8NHY3 880 aa26.35■■□□□ 1.81
TRAPPC12-220ENST00000482645 RUNDC1Q96C34 613 aa26.34■■□□□ 1.81
TRAPPC12-220ENST00000482645 KAT6BQ8WYB5 2073 aa26.33■■□□□ 1.81
TRAPPC12-220ENST00000482645 SENP3-EIF4A1A0A087X0R7 540 aa26.32■■□□□ 1.8
TRAPPC12-220ENST00000482645 YTHDC1Q96MU7 727 aaKnown RBP26.32■■□□□ 1.8
TRAPPC12-220ENST00000482645 AKAP4Q5JQC9 854 aa26.31■■□□□ 1.8
TRAPPC12-220ENST00000482645 FAM196AQ6ZSG2 479 aa26.3■■□□□ 1.8
TRAPPC12-220ENST00000482645 ACSBG1Q96GR2 724 aa26.3■■□□□ 1.8
TRAPPC12-220ENST00000482645 RRP7AQ9Y3A4 280 aaKnown RBP26.3■■□□□ 1.8
TRAPPC12-220ENST00000482645 NEUROD2Q15784 382 aa26.29■■□□□ 1.8
TRAPPC12-220ENST00000482645 MPRIPQ6WCQ1 1025 aa26.29■■□□□ 1.8
TRAPPC12-220ENST00000482645 NFE2L2Q16236 605 aa26.29■■□□□ 1.8
TRAPPC12-220ENST00000482645 MAP3K5Q99683 1374 aa26.28■■□□□ 1.8
TRAPPC12-220ENST00000482645 GNAT3A8MTJ3 354 aa26.28■■□□□ 1.8
TRAPPC12-220ENST00000482645 SYTL4Q96C24 671 aaPredicted RBP26.28■■□□□ 1.8
TRAPPC12-220ENST00000482645 DOT1LQ8TEK3 1739 aa26.27■■□□□ 1.8
TRAPPC12-220ENST00000482645 APAF1O14727 1248 aa26.27■■□□□ 1.8
TRAPPC12-220ENST00000482645 HSP90AB1P08238 724 aaKnown RBP26.27■■□□□ 1.8
TRAPPC12-220ENST00000482645 TMPOP42166 694 aaKnown RBP26.26■■□□□ 1.79
TRAPPC12-220ENST00000482645 DLG5Q8TDM6 1919 aa26.26■■□□□ 1.79
TRAPPC12-220ENST00000482645 NKX1-1Q15270 411 aaPredicted RBP26.25■■□□□ 1.79
TRAPPC12-220ENST00000482645 DCAF5Q96JK2 942 aa26.25■■□□□ 1.79
TRAPPC12-220ENST00000482645 KDM6AO15550 1401 aaPredicted RBP26.25■■□□□ 1.79
TRAPPC12-220ENST00000482645 RIPK4P57078 832 aa26.24■■□□□ 1.79
TRAPPC12-220ENST00000482645 RTF1Q92541 710 aaKnown RBP26.24■■□□□ 1.79
TRAPPC12-220ENST00000482645 TOGARAM1Q9Y4F4 1720 aa26.24■■□□□ 1.79
TRAPPC12-220ENST00000482645 TRIM37O94972 964 aa26.24■■□□□ 1.79
TRAPPC12-220ENST00000482645 KCNQ2O43526 872 aa26.23■■□□□ 1.79
TRAPPC12-220ENST00000482645 LGR6Q9HBX8 967 aa26.23■■□□□ 1.79
TRAPPC12-220ENST00000482645 SBF2Q86WG5 1849 aa26.23■■□□□ 1.79
TRAPPC12-220ENST00000482645 VIRMAQ69YN4 1812 aaKnown RBP26.22■■□□□ 1.79
TRAPPC12-220ENST00000482645 BCL9O00512 1426 aa26.22■■□□□ 1.79
TRAPPC12-220ENST00000482645 PRIM1P49642 420 aaKnown RBP26.22■■□□□ 1.79
TRAPPC12-220ENST00000482645 DCTN1Q14203 1278 aa26.22■■□□□ 1.79
TRAPPC12-220ENST00000482645 MCM10Q7L590 875 aa26.22■■□□□ 1.79
TRAPPC12-220ENST00000482645 RNMTO43148 476 aaKnown RBP26.2■■□□□ 1.79
TRAPPC12-220ENST00000482645 PTF1AQ7RTS3 328 aa26.2■■□□□ 1.79
TRAPPC12-220ENST00000482645 SALL2Q9Y467 1007 aaPredicted RBP26.2■■□□□ 1.79
TRAPPC12-220ENST00000482645 SCN11AQ9UI33 1791 aa26.2■■□□□ 1.79
TRAPPC12-220ENST00000482645 IL17REQ8NFR9 667 aa26.19■■□□□ 1.78
TRAPPC12-220ENST00000482645 NHSQ6T4R5 1651 aa26.18■■□□□ 1.78
TRAPPC12-220ENST00000482645 ITGB4P16144 1822 aa26.18■■□□□ 1.78
TRAPPC12-220ENST00000482645 CABP4P57796 275 aa26.18■■□□□ 1.78
TRAPPC12-220ENST00000482645 HNRNPUQ00839 825 aaKnown RBP eCLIP26.18■■□□□ 1.78
TRAPPC12-220ENST00000482645 THUMPD2Q9BTF0 503 aaKnown RBP26.17■■□□□ 1.78
TRAPPC12-220ENST00000482645 TMOD3Q9NYL9 352 aa26.17■■□□□ 1.78
TRAPPC12-220ENST00000482645 ERVV-2B6SEH9 535 aa26.16■■□□□ 1.78
TRAPPC12-220ENST00000482645 LMOD3Q0VAK6 560 aa26.16■■□□□ 1.78
TRAPPC12-220ENST00000482645 BCL11BQ9C0K0 894 aaPredicted RBP26.16■■□□□ 1.78
TRAPPC12-220ENST00000482645 HTATSF1O43719 755 aaKnown RBP26.15■■□□□ 1.78
TRAPPC12-220ENST00000482645 TEFQ10587 303 aa26.15■■□□□ 1.78
TRAPPC12-220ENST00000482645 NFATC2IPQ8NCF5 419 aa26.15■■□□□ 1.78
TRAPPC12-220ENST00000482645 ADAMTS7Q9UKP4 1686 aa26.14■■□□□ 1.78
TRAPPC12-220ENST00000482645 PIGBQ92521 554 aa26.14■■□□□ 1.77
TRAPPC12-220ENST00000482645 SLC52A2Q9HAB3 445 aa26.14■■□□□ 1.77
TRAPPC12-220ENST00000482645 TRIM35Q9UPQ4 493 aa26.14■■□□□ 1.77
TRAPPC12-220ENST00000482645 SF3B2Q13435 895 aaKnown RBP26.13■■□□□ 1.77
TRAPPC12-220ENST00000482645 BTAF1O14981 1849 aa26.13■■□□□ 1.77
TRAPPC12-220ENST00000482645 CEMIPQ8WUJ3 1361 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms