RNA–Protein interactions for RNA: ENST00000482623.5

FAM3D-202, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-202ENST00000482623 ZBTB7AO95365 584 aa16.74■□□□□ 0.27
FAM3D-202ENST00000482623 AKT1S1Q96B36 256 aa16.74■□□□□ 0.27
FAM3D-202ENST00000482623 SGIP1Q9BQI5 828 aa16.74■□□□□ 0.27
FAM3D-202ENST00000482623 PCGF6Q9BYE7 350 aa16.74■□□□□ 0.27
FAM3D-202ENST00000482623 LRRC4BQ9NT99 713 aa16.74■□□□□ 0.27
FAM3D-202ENST00000482623 NSD2O96028 1365 aa16.74■□□□□ 0.27
FAM3D-202ENST00000482623 EIF4G2P78344 907 aaKnown RBP eCLIP16.73■□□□□ 0.27
FAM3D-202ENST00000482623 PDGFDQ9GZP0 370 aaPredicted RBP16.73■□□□□ 0.27
FAM3D-202ENST00000482623 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.73■□□□□ 0.27
FAM3D-202ENST00000482623 PLEKHG2Q9H7P9 1386 aa16.72■□□□□ 0.27
FAM3D-202ENST00000482623 CASZ1Q86V15 1759 aa16.72■□□□□ 0.27
FAM3D-202ENST00000482623 PCDH11XQ9BZA7 1347 aa16.71■□□□□ 0.27
FAM3D-202ENST00000482623 PCDH11YQ9BZA8 1340 aa16.71■□□□□ 0.27
FAM3D-202ENST00000482623 ATF5Q9Y2D1 282 aaPredicted RBP16.71■□□□□ 0.27
FAM3D-202ENST00000482623 NSD3Q9BZ95 1437 aa16.7■□□□□ 0.26
FAM3D-202ENST00000482623 MAP3K5Q99683 1374 aa16.7■□□□□ 0.26
FAM3D-202ENST00000482623 NKX1-1Q15270 411 aaPredicted RBP16.7■□□□□ 0.26
FAM3D-202ENST00000482623 SYTL4Q96C24 671 aaPredicted RBP16.7■□□□□ 0.26
FAM3D-202ENST00000482623 MEGF6O75095 1541 aa16.7■□□□□ 0.26
FAM3D-202ENST00000482623 ARXQ96QS3 562 aa16.69■□□□□ 0.26
FAM3D-202ENST00000482623 SYT17Q9BSW7 474 aa16.69■□□□□ 0.26
FAM3D-202ENST00000482623 ZNF827Q17R98 1081 aa16.68■□□□□ 0.26
FAM3D-202ENST00000482623 TFCP2L1Q9NZI6 479 aa16.68■□□□□ 0.26
FAM3D-202ENST00000482623 SPG7Q9UQ90 795 aa16.68■□□□□ 0.26
FAM3D-202ENST00000482623 NCAPD2Q15021 1401 aa16.68■□□□□ 0.26
FAM3D-202ENST00000482623 FLAD1Q8NFF5 587 aa16.67■□□□□ 0.26
FAM3D-202ENST00000482623 SMARCC1Q92922 1105 aaPredicted RBP16.67■□□□□ 0.26
FAM3D-202ENST00000482623 POLKQ9UBT6 870 aa16.67■□□□□ 0.26
FAM3D-202ENST00000482623 EMILIN1Q9Y6C2 1016 aa16.67■□□□□ 0.26
FAM3D-202ENST00000482623 PAPPAQ13219 1627 aa16.67■□□□□ 0.26
FAM3D-202ENST00000482623 BTAF1O14981 1849 aa16.66■□□□□ 0.26
FAM3D-202ENST00000482623 YY1P25490 414 aa16.66■□□□□ 0.26
FAM3D-202ENST00000482623 POLD1P28340 1107 aa16.66■□□□□ 0.26
FAM3D-202ENST00000482623 USHBP1Q8N6Y0 703 aa16.66■□□□□ 0.26
FAM3D-202ENST00000482623 FHDC1Q9C0D6 1143 aaPredicted RBP16.66■□□□□ 0.26
FAM3D-202ENST00000482623 CCNL1Q9UK58 526 aaPredicted RBP16.66■□□□□ 0.26
FAM3D-202ENST00000482623 CYP27B1O15528 508 aa16.65■□□□□ 0.26
FAM3D-202ENST00000482623 CCER1Q8TC90 406 aaPredicted RBP16.64■□□□□ 0.25
FAM3D-202ENST00000482623 EYA1Q99502 592 aa16.64■□□□□ 0.25
FAM3D-202ENST00000482623 PNPLA7Q6ZV29 1317 aa16.64■□□□□ 0.25
FAM3D-202ENST00000482623 PPM1GO15355 546 aaPredicted RBP16.63■□□□□ 0.25
FAM3D-202ENST00000482623 HSPA5P11021 654 aaKnown RBP16.63■□□□□ 0.25
FAM3D-202ENST00000482623 KAT6BQ8WYB5 2073 aa16.63■□□□□ 0.25
FAM3D-202ENST00000482623 PANK3Q9H999 370 aa16.62■□□□□ 0.25
FAM3D-202ENST00000482623 MPRIPQ6WCQ1 1025 aa16.61■□□□□ 0.25
FAM3D-202ENST00000482623 IFNL2Q8IZJ0 200 aa16.61■□□□□ 0.25
FAM3D-202ENST00000482623 KIF20BQ96Q89 1820 aa16.61■□□□□ 0.25
FAM3D-202ENST00000482623 MYOM1P52179 1685 aa16.59■□□□□ 0.25
FAM3D-202ENST00000482623 HSP90AB1P08238 724 aaKnown RBP16.58■□□□□ 0.24
FAM3D-202ENST00000482623 EIF4A2Q14240 407 aaKnown RBP16.58■□□□□ 0.24
FAM3D-202ENST00000482623 PIGBQ92521 554 aa16.58■□□□□ 0.24
FAM3D-202ENST00000482623 PALLDQ8WX93 1383 aa16.58■□□□□ 0.24
FAM3D-202ENST00000482623 QSER1Q2KHR3 1735 aa16.58■□□□□ 0.24
FAM3D-202ENST00000482623 LY75O60449 1722 aa16.57■□□□□ 0.24
FAM3D-202ENST00000482623 ERVV-2B6SEH9 535 aa16.57■□□□□ 0.24
FAM3D-202ENST00000482623 PHKG2P15735 406 aa16.57■□□□□ 0.24
FAM3D-202ENST00000482623 KCNQ4P56696 695 aa16.57■□□□□ 0.24
FAM3D-202ENST00000482623 AMOTQ4VCS5 1084 aa16.57■□□□□ 0.24
FAM3D-202ENST00000482623 COL23A1Q86Y22 540 aaPredicted RBP16.57■□□□□ 0.24
FAM3D-202ENST00000482623 KNSTRNQ9Y448 316 aa16.57■□□□□ 0.24
FAM3D-202ENST00000482623 RGPD2P0DJD1 1756 aa16.56■□□□□ 0.24
FAM3D-202ENST00000482623 SHANK3Q9BYB0 1731 aa16.56■□□□□ 0.24
FAM3D-202ENST00000482623 IGSF1Q8N6C5 1336 aa16.56■□□□□ 0.24
FAM3D-202ENST00000482623 POLR3GLQ9BT43 218 aa16.56■□□□□ 0.24
FAM3D-202ENST00000482623 TMOD3Q9NYL9 352 aa16.56■□□□□ 0.24
FAM3D-202ENST00000482623 PLEKHO1Q53GL0 409 aaPredicted RBP16.55■□□□□ 0.24
FAM3D-202ENST00000482623 MORC1Q86VD1 984 aa16.55■□□□□ 0.24
FAM3D-202ENST00000482623 ANKRD26Q9UPS8 1709 aa16.55■□□□□ 0.24
FAM3D-202ENST00000482623 UTRNP46939 3433 aa16.55■□□□□ 0.24
FAM3D-202ENST00000482623 DOT1LQ8TEK3 1739 aa16.54■□□□□ 0.24
FAM3D-202ENST00000482623 DCAF5Q96JK2 942 aa16.54■□□□□ 0.24
FAM3D-202ENST00000482623 LOC102724428A0A0B4J2F2 783 aa16.53■□□□□ 0.24
FAM3D-202ENST00000482623 SSFA2P28290 1259 aa16.53■□□□□ 0.24
FAM3D-202ENST00000482623 SIK1P57059 783 aa16.53■□□□□ 0.24
FAM3D-202ENST00000482623 CD2APQ9Y5K6 639 aa16.53■□□□□ 0.24
FAM3D-202ENST00000482623 COL24A1Q17RW2 1714 aa16.53■□□□□ 0.24
FAM3D-202ENST00000482623 MSH5O43196 834 aa16.52■□□□□ 0.24
FAM3D-202ENST00000482623 GRIN3BO60391 1043 aa16.52■□□□□ 0.24
FAM3D-202ENST00000482623 TNNT2P45379 298 aaPredicted RBP16.52■□□□□ 0.24
FAM3D-202ENST00000482623 AK7Q96M32 723 aa16.52■□□□□ 0.24
FAM3D-202ENST00000482623 PKD1L3Q7Z443 1732 aa16.52■□□□□ 0.24
FAM3D-202ENST00000482623 GPR162Q16538 588 aa16.51■□□□□ 0.23
FAM3D-202ENST00000482623 MAP2P11137 1827 aaKnown RBP16.51■□□□□ 0.23
FAM3D-202ENST00000482623 AMER1Q5JTC6 1135 aaPredicted RBP16.49■□□□□ 0.23
FAM3D-202ENST00000482623 RC3H1Q5TC82 1133 aaKnown RBP16.49■□□□□ 0.23
FAM3D-202ENST00000482623 ATG3Q9NT62 314 aa16.49■□□□□ 0.23
FAM3D-202ENST00000482623 ASAP1Q9ULH1 1129 aa16.49■□□□□ 0.23
FAM3D-202ENST00000482623 ATP6V1AP38606 617 aa16.48■□□□□ 0.23
FAM3D-202ENST00000482623 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.47■□□□□ 0.23
FAM3D-202ENST00000482623 PER1O15534 1290 aaPredicted RBP16.47■□□□□ 0.23
FAM3D-202ENST00000482623 IL13P35225 146 aa16.47■□□□□ 0.23
FAM3D-202ENST00000482623 ZNF784Q8NCA9 323 aaPredicted RBP16.47■□□□□ 0.23
FAM3D-202ENST00000482623 KDRP35968 1356 aa16.47■□□□□ 0.23
FAM3D-202ENST00000482623 ADRA2BP18089 450 aa16.46■□□□□ 0.23
FAM3D-202ENST00000482623 MTHFSP49914 203 aa16.46■□□□□ 0.23
FAM3D-202ENST00000482623 CABP4P57796 275 aa16.45■□□□□ 0.22
FAM3D-202ENST00000482623 C1orf141Q5JVX7 400 aa16.45■□□□□ 0.22
FAM3D-202ENST00000482623 ZNF530Q6P9A1 599 aaPredicted RBP16.45■□□□□ 0.22
FAM3D-202ENST00000482623 LINC00116Q8NCU8 138 aa16.45■□□□□ 0.22
FAM3D-202ENST00000482623 KIF7Q2M1P5 1343 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms