RNA–Protein interactions for RNA: ENST00000482458.1

STK40-208, Transcript of serine/threonine kinase 40, humanhuman

TSL 3

Gene STK40, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STK40-208ENST00000482458 ZCRB1Q8TBF4 217 aaKnown RBP35.55■■■■□ 3.28
STK40-208ENST00000482458 GPR162Q16538 588 aa35.54■■■■□ 3.28
STK40-208ENST00000482458 QSER1Q2KHR3 1735 aa35.53■■■■□ 3.28
STK40-208ENST00000482458 NSD2O96028 1365 aa35.52■■■■□ 3.28
STK40-208ENST00000482458 DOT1LQ8TEK3 1739 aa35.52■■■■□ 3.28
STK40-208ENST00000482458 CHD4Q14839 1912 aa35.52■■■■□ 3.28
STK40-208ENST00000482458 MEGF6O75095 1541 aa35.52■■■■□ 3.28
STK40-208ENST00000482458 SLC24A1O60721 1099 aa35.5■■■■□ 3.27
STK40-208ENST00000482458 RTL1A6NKG5 1358 aa35.49■■■■□ 3.27
STK40-208ENST00000482458 RGPD2P0DJD1 1756 aa35.47■■■■□ 3.27
STK40-208ENST00000482458 RRS1Q15050 365 aaKnown RBP35.47■■■■□ 3.27
STK40-208ENST00000482458 CCNL1Q9UK58 526 aaPredicted RBP35.47■■■■□ 3.27
STK40-208ENST00000482458 SHANK3Q9BYB0 1731 aa35.46■■■■□ 3.27
STK40-208ENST00000482458 NBPF6Q5VWK0 638 aa35.46■■■■□ 3.27
STK40-208ENST00000482458 NBPF4Q96M43 638 aa35.46■■■■□ 3.27
STK40-208ENST00000482458 TUBGCP6Q96RT7 1819 aa35.46■■■■□ 3.27
STK40-208ENST00000482458 LY75O60449 1722 aa35.45■■■■□ 3.27
STK40-208ENST00000482458 COL24A1Q17RW2 1714 aa35.45■■■■□ 3.27
STK40-208ENST00000482458 PELP1Q8IZL8 1130 aaKnown RBP35.44■■■■□ 3.26
STK40-208ENST00000482458 USHBP1Q8N6Y0 703 aa35.44■■■■□ 3.26
STK40-208ENST00000482458 GGNBP2Q9H3C7 697 aa35.43■■■■□ 3.26
STK40-208ENST00000482458 USP47Q96K76 1375 aa35.42■■■■□ 3.26
STK40-208ENST00000482458 FYB1O15117 783 aa35.42■■■■□ 3.26
STK40-208ENST00000482458 RAPGEF4Q8WZA2 1011 aa35.41■■■■□ 3.26
STK40-208ENST00000482458 CGNL1Q0VF96 1302 aa35.4■■■■□ 3.26
STK40-208ENST00000482458 NLGN2Q8NFZ4 835 aa35.4■■■■□ 3.26
STK40-208ENST00000482458 SMG6Q86US8 1419 aaKnown RBP35.4■■■■□ 3.26
STK40-208ENST00000482458 MSH5O43196 834 aa35.39■■■■□ 3.26
STK40-208ENST00000482458 C1QTNF8P60827 252 aa35.39■■■■□ 3.26
STK40-208ENST00000482458 SENP3-EIF4A1A0A087X0R7 540 aa35.36■■■■□ 3.25
STK40-208ENST00000482458 TATP17735 454 aaPredicted RBP35.36■■■■□ 3.25
STK40-208ENST00000482458 TMF1P82094 1093 aa35.36■■■■□ 3.25
STK40-208ENST00000482458 COL23A1Q86Y22 540 aaPredicted RBP35.36■■■■□ 3.25
STK40-208ENST00000482458 HSP90AB2PQ58FF8 381 aa35.32■■■■□ 3.24
STK40-208ENST00000482458 INSRP06213 1382 aa35.32■■■■□ 3.24
STK40-208ENST00000482458 PCDH11XQ9BZA7 1347 aa35.31■■■■□ 3.24
STK40-208ENST00000482458 PCDH11YQ9BZA8 1340 aa35.31■■■■□ 3.24
STK40-208ENST00000482458 MSL1Q68DK7 614 aa35.3■■■■□ 3.24
STK40-208ENST00000482458 GOLGB1Q14789 3259 aaKnown RBP35.3■■■■□ 3.24
STK40-208ENST00000482458 FLT4P35916 1363 aa35.28■■■■□ 3.24
STK40-208ENST00000482458 GIGYF1O75420 1035 aaPredicted RBP35.26■■■■□ 3.24
STK40-208ENST00000482458 YBX3P16989 372 aaKnown RBP eCLIP35.26■■■■□ 3.244e-11■■□□□ 14.5
STK40-208ENST00000482458 PALLDQ8WX93 1383 aa35.25■■■■□ 3.23
STK40-208ENST00000482458 KIF24Q5T7B8 1368 aa35.25■■■■□ 3.23
STK40-208ENST00000482458 GRIN3BO60391 1043 aa35.24■■■■□ 3.23
STK40-208ENST00000482458 MPRIPQ6WCQ1 1025 aa35.24■■■■□ 3.23
STK40-208ENST00000482458 C5P01031 1676 aa35.24■■■■□ 3.23
STK40-208ENST00000482458 CYP27B1O15528 508 aa35.23■■■■□ 3.23
STK40-208ENST00000482458 CDCA8Q53HL2 280 aa35.23■■■■□ 3.23
STK40-208ENST00000482458 HMGB2P26583 209 aaKnown RBP35.22■■■■□ 3.23
STK40-208ENST00000482458 KIF20BQ96Q89 1820 aa35.22■■■■□ 3.23
STK40-208ENST00000482458 FLAD1Q8NFF5 587 aa35.21■■■■□ 3.23
STK40-208ENST00000482458 EMILIN1Q9Y6C2 1016 aa35.18■■■■□ 3.22
STK40-208ENST00000482458 SMARCC1Q92922 1105 aaPredicted RBP35.17■■■■□ 3.22
STK40-208ENST00000482458 CARD14Q9BXL6 1004 aa35.17■■■■□ 3.22
STK40-208ENST00000482458 CD2APQ9Y5K6 639 aa35.16■■■■□ 3.22
STK40-208ENST00000482458 AK7Q96M32 723 aa35.14■■■■□ 3.22
STK40-208ENST00000482458 TOGARAM1Q9Y4F4 1720 aa35.14■■■■□ 3.22
STK40-208ENST00000482458 NSD3Q9BZ95 1437 aa35.14■■■■□ 3.22
STK40-208ENST00000482458 TAF1LQ8IZX4 1826 aa35.13■■■■□ 3.21
STK40-208ENST00000482458 PPM1GO15355 546 aaPredicted RBP35.12■■■■□ 3.21
STK40-208ENST00000482458 PIGBQ92521 554 aa35.12■■■■□ 3.21
STK40-208ENST00000482458 C4BP0C0L5 1744 aa35.11■■■■□ 3.21
STK40-208ENST00000482458 PKD1L3Q7Z443 1732 aa35.1■■■■□ 3.21
STK40-208ENST00000482458 AMIGO3Q86WK7 504 aa35.1■■■■□ 3.21
STK40-208ENST00000482458 NCAPD2Q15021 1401 aa35.09■■■■□ 3.21
STK40-208ENST00000482458 SPG7Q9UQ90 795 aa35.09■■■■□ 3.21
STK40-208ENST00000482458 ITGB4P16144 1822 aa35.09■■■■□ 3.21
STK40-208ENST00000482458 PHF14O94880 888 aa35.08■■■■□ 3.21
STK40-208ENST00000482458 NKX1-1Q15270 411 aaPredicted RBP35.08■■■■□ 3.21
STK40-208ENST00000482458 SMIM5Q71RC9 77 aa35.06■■■■□ 3.2
STK40-208ENST00000482458 ATP10DQ9P241 1426 aa35.06■■■■□ 3.2
STK40-208ENST00000482458 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP35.05■■■■□ 3.2
STK40-208ENST00000482458 WASHC2AQ641Q2 1341 aa35.04■■■■□ 3.2
STK40-208ENST00000482458 LOC102724428A0A0B4J2F2 783 aa35.03■■■■□ 3.2
STK40-208ENST00000482458 SIK1P57059 783 aa35.03■■■■□ 3.2
STK40-208ENST00000482458 EYA1Q99502 592 aa35.02■■■■□ 3.2
STK40-208ENST00000482458 LINC00116Q8NCU8 138 aa35.01■■■■□ 3.2
STK40-208ENST00000482458 TMOD3Q9NYL9 352 aa35.01■■■■□ 3.2
STK40-208ENST00000482458 SSFA2P28290 1259 aa35■■■■□ 3.19
STK40-208ENST00000482458 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP35■■■■□ 3.19
STK40-208ENST00000482458 UBR3Q6ZT12 1888 aa35■■■■□ 3.19
STK40-208ENST00000482458 ANKRD26Q9UPS8 1709 aa35■■■■□ 3.19
STK40-208ENST00000482458 IGSF1Q8N6C5 1336 aa34.98■■■■□ 3.19
STK40-208ENST00000482458 ASAP1Q9ULH1 1129 aa34.97■■■■□ 3.19
STK40-208ENST00000482458 MAP2P11137 1827 aaKnown RBP34.97■■■■□ 3.19
STK40-208ENST00000482458 WWC3Q9ULE0 1092 aa34.96■■■■□ 3.19
STK40-208ENST00000482458 PHKG2P15735 406 aa34.95■■■■□ 3.19
STK40-208ENST00000482458 IFNL2Q8IZJ0 200 aa34.95■■■■□ 3.19
STK40-208ENST00000482458 GPBP1L1Q9HC44 474 aaPredicted RBP34.95■■■■□ 3.19
STK40-208ENST00000482458 POLKQ9UBT6 870 aa34.95■■■■□ 3.19
STK40-208ENST00000482458 GNPATO15228 680 aa34.94■■■■□ 3.18
STK40-208ENST00000482458 ITPK1Q13572 414 aa34.94■■■■□ 3.18
STK40-208ENST00000482458 ADCY9O60503 1353 aa34.94■■■■□ 3.18
STK40-208ENST00000482458 ATP6V1AP38606 617 aa34.92■■■■□ 3.18
STK40-208ENST00000482458 CEP350Q5VT06 3117 aa34.91■■■■□ 3.18
STK40-208ENST00000482458 ZNF526Q8TF50 670 aaPredicted RBP34.91■■■■□ 3.18
STK40-208ENST00000482458 ATG3Q9NT62 314 aa34.9■■■■□ 3.18
STK40-208ENST00000482458 TRIM26Q12899 539 aaPredicted RBP34.89■■■■□ 3.18
STK40-208ENST00000482458 EIF4A2Q14240 407 aaKnown RBP34.88■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms