RNA–Protein interactions for RNA: ENST00000482318.5

RUNX1-216, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-216ENST00000482318 GNAT3A8MTJ3 354 aa28.39■■■□□ 2.14
RUNX1-216ENST00000482318 USHBP1Q8N6Y0 703 aa28.39■■■□□ 2.14
RUNX1-216ENST00000482318 MAP3K5Q99683 1374 aa28.39■■■□□ 2.14
RUNX1-216ENST00000482318 CRB1P82279 1406 aa28.38■■■□□ 2.13
RUNX1-216ENST00000482318 CPDO75976 1380 aa28.38■■■□□ 2.13
RUNX1-216ENST00000482318 KIF16BQ96L93 1317 aa28.38■■■□□ 2.13
RUNX1-216ENST00000482318 CHL1O00533 1208 aa28.38■■■□□ 2.13
RUNX1-216ENST00000482318 HAP1P54257 671 aaPredicted RBP28.38■■■□□ 2.13
RUNX1-216ENST00000482318 ZKSCAN2Q63HK3 967 aa28.38■■■□□ 2.13
RUNX1-216ENST00000482318 SSH1Q8WYL5 1049 aa28.38■■■□□ 2.13
RUNX1-216ENST00000482318 ERBB3P21860 1342 aa28.36■■■□□ 2.13
RUNX1-216ENST00000482318 AXIN2Q9Y2T1 843 aa28.36■■■□□ 2.13
RUNX1-216ENST00000482318 LMO7Q8WWI1 1683 aa28.36■■■□□ 2.13
RUNX1-216ENST00000482318 LRRC59Q96AG4 307 aaKnown RBP28.35■■■□□ 2.13
RUNX1-216ENST00000482318 AAMPQ13685 434 aa28.35■■■□□ 2.13
RUNX1-216ENST00000482318 BRPF1P55201 1214 aaPredicted RBP28.34■■■□□ 2.13
RUNX1-216ENST00000482318 KIAA0232Q92628 1395 aa28.33■■■□□ 2.13
RUNX1-216ENST00000482318 IPO8O15397 1037 aaKnown RBP28.33■■■□□ 2.13
RUNX1-216ENST00000482318 VAMP4O75379 141 aa28.33■■■□□ 2.13
RUNX1-216ENST00000482318 TWISTNBQ3B726 338 aaPredicted RBP28.33■■■□□ 2.13
RUNX1-216ENST00000482318 CABLES1Q8TDN4 633 aa28.33■■■□□ 2.13
RUNX1-216ENST00000482318 AMOTQ4VCS5 1084 aa28.32■■■□□ 2.12
RUNX1-216ENST00000482318 PANK1Q8TE04 598 aa28.32■■■□□ 2.12
RUNX1-216ENST00000482318 ABCA3Q99758 1704 aa28.31■■■□□ 2.12
RUNX1-216ENST00000482318 PLEKHO1Q53GL0 409 aaPredicted RBP28.31■■■□□ 2.12
RUNX1-216ENST00000482318 LTBP4Q8N2S1 1624 aa28.31■■■□□ 2.12
RUNX1-216ENST00000482318 FTSJ3Q8IY81 847 aaKnown RBP28.29■■■□□ 2.12
RUNX1-216ENST00000482318 DZIP1LQ8IYY4 767 aaKnown RBP28.29■■■□□ 2.12
RUNX1-216ENST00000482318 TSPYL6Q8N831 410 aa28.29■■■□□ 2.12
RUNX1-216ENST00000482318 BABAM1Q9NWV8 329 aa28.29■■■□□ 2.12
RUNX1-216ENST00000482318 COG6Q9Y2V7 657 aa28.29■■■□□ 2.12
RUNX1-216ENST00000482318 ATF7IPQ6VMQ6 1270 aa28.28■■■□□ 2.12
RUNX1-216ENST00000482318 C8orf58Q8NAV2 365 aa28.28■■■□□ 2.12
RUNX1-216ENST00000482318 PLEKHG2Q9H7P9 1386 aa28.28■■■□□ 2.12
RUNX1-216ENST00000482318 TSPYL4Q9UJ04 414 aa28.26■■■□□ 2.12
RUNX1-216ENST00000482318 NOB1Q9ULX3 412 aaKnown RBP28.26■■■□□ 2.11
RUNX1-216ENST00000482318 AKAP4Q5JQC9 854 aa28.25■■■□□ 2.11
RUNX1-216ENST00000482318 ROBO1Q9Y6N7 1651 aa28.25■■■□□ 2.11
RUNX1-216ENST00000482318 TRIM27P14373 513 aa28.24■■■□□ 2.11
RUNX1-216ENST00000482318 ELL2O00472 640 aaPredicted RBP28.23■■■□□ 2.11
RUNX1-216ENST00000482318 RLBP1P12271 317 aa28.23■■■□□ 2.11
RUNX1-216ENST00000482318 ZNF530Q6P9A1 599 aaPredicted RBP28.23■■■□□ 2.11
RUNX1-216ENST00000482318 IL17REQ8NFR9 667 aa28.23■■■□□ 2.11
RUNX1-216ENST00000482318 ARHGAP45Q92619 1136 aa28.23■■■□□ 2.11
RUNX1-216ENST00000482318 CLUAP1Q96AJ1 413 aa28.23■■■□□ 2.11
RUNX1-216ENST00000482318 NLRP2Q9NX02 1062 aa28.23■■■□□ 2.11
RUNX1-216ENST00000482318 CEMIPQ8WUJ3 1361 aa28.23■■■□□ 2.11
RUNX1-216ENST00000482318 MVPQ14764 893 aaKnown RBP28.23■■■□□ 2.11
RUNX1-216ENST00000482318 MRPL50Q8N5N7 158 aaKnown RBP28.23■■■□□ 2.11
RUNX1-216ENST00000482318 VIRMAQ69YN4 1812 aaKnown RBP28.23■■■□□ 2.11
RUNX1-216ENST00000482318 CSB-PGBD3P0DP91 1061 aa28.22■■■□□ 2.11
RUNX1-216ENST00000482318 CHRNA2Q15822 529 aa28.22■■■□□ 2.11
RUNX1-216ENST00000482318 OVOS2A0A0G2JMS6 1433 aa28.22■■■□□ 2.11
RUNX1-216ENST00000482318 AHDC1Q5TGY3 1603 aaPredicted RBP28.21■■■□□ 2.11
RUNX1-216ENST00000482318 TAF7Q15545 349 aaPredicted RBP28.21■■■□□ 2.11
RUNX1-216ENST00000482318 C1orf141Q5JVX7 400 aa28.21■■■□□ 2.11
RUNX1-216ENST00000482318 CENPQQ7L2Z9 268 aaPredicted RBP28.21■■■□□ 2.11
RUNX1-216ENST00000482318 RAPGEF4Q8WZA2 1011 aa28.21■■■□□ 2.11
RUNX1-216ENST00000482318 PRDM11Q9NQV5 511 aa28.21■■■□□ 2.11
RUNX1-216ENST00000482318 TNNQ9UQP3 1299 aa28.21■■■□□ 2.11
RUNX1-216ENST00000482318 SOS1Q07889 1333 aaPredicted RBP28.19■■■□□ 2.1
RUNX1-216ENST00000482318 KDM2BQ8NHM5 1336 aa28.18■■■□□ 2.1
RUNX1-216ENST00000482318 TSHZ2Q9NRE2 1034 aa28.18■■■□□ 2.1
RUNX1-216ENST00000482318 DDX19BQ9UMR2 479 aa28.18■■■□□ 2.1
RUNX1-216ENST00000482318 TATP17735 454 aaPredicted RBP28.17■■■□□ 2.1
RUNX1-216ENST00000482318 MIS18AQ9NYP9 233 aa28.17■■■□□ 2.1
RUNX1-216ENST00000482318 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.16■■■□□ 2.1
RUNX1-216ENST00000482318 ADAMTS7Q9UKP4 1686 aa28.14■■■□□ 2.1
RUNX1-216ENST00000482318 KDM3BQ7LBC6 1761 aa28.14■■■□□ 2.1
RUNX1-216ENST00000482318 TEFQ10587 303 aa28.13■■■□□ 2.09
RUNX1-216ENST00000482318 KRT24Q2M2I5 525 aa28.13■■■□□ 2.09
RUNX1-216ENST00000482318 API5Q9BZZ5 524 aaKnown RBP28.13■■■□□ 2.09
RUNX1-216ENST00000482318 SPG7Q9UQ90 795 aa28.13■■■□□ 2.09
RUNX1-216ENST00000482318 WDR17Q8IZU2 1322 aa28.13■■■□□ 2.09
RUNX1-216ENST00000482318 PKD1L3Q7Z443 1732 aa28.12■■■□□ 2.09
RUNX1-216ENST00000482318 ITPRIPQ8IWB1 547 aa28.12■■■□□ 2.09
RUNX1-216ENST00000482318 CACNA1FO60840 1977 aa28.12■■■□□ 2.09
RUNX1-216ENST00000482318 COL5A2P05997 1499 aaPredicted RBP28.12■■■□□ 2.09
RUNX1-216ENST00000482318 CHMP4BQ9H444 224 aaKnown RBP28.12■■■□□ 2.09
RUNX1-216ENST00000482318 COL22A1Q8NFW1 1626 aaPredicted RBP28.12■■■□□ 2.09
RUNX1-216ENST00000482318 PARP4Q9UKK3 1724 aaKnown RBP28.11■■■□□ 2.09
RUNX1-216ENST00000482318 MEGF6O75095 1541 aa28.1■■■□□ 2.09
RUNX1-216ENST00000482318 RNMTO43148 476 aaKnown RBP28.1■■■□□ 2.09
RUNX1-216ENST00000482318 TMEM57Q8N5G2 664 aa28.1■■■□□ 2.09
RUNX1-216ENST00000482318 LGR6Q9HBX8 967 aa28.1■■■□□ 2.09
RUNX1-216ENST00000482318 MPRIPQ6WCQ1 1025 aa28.09■■■□□ 2.09
RUNX1-216ENST00000482318 SIPA1L3O60292 1781 aaPredicted RBP28.09■■■□□ 2.09
RUNX1-216ENST00000482318 SCN11AQ9UI33 1791 aa28.08■■■□□ 2.09
RUNX1-216ENST00000482318 ABCC4O15439 1325 aa28.08■■■□□ 2.09
RUNX1-216ENST00000482318 TCERG1O14776 1098 aaKnown RBP28.08■■■□□ 2.09
RUNX1-216ENST00000482318 PTPRCP08575 1304 aa28.07■■■□□ 2.08
RUNX1-216ENST00000482318 CHMP4AQ9BY43 222 aa28.07■■■□□ 2.08
RUNX1-216ENST00000482318 CCDC30Q5VVM6 783 aa28.05■■■□□ 2.08
RUNX1-216ENST00000482318 TOM1L2Q6ZVM7 507 aa28.05■■■□□ 2.08
RUNX1-216ENST00000482318 STK31Q9BXU1 1019 aa28.05■■■□□ 2.08
RUNX1-216ENST00000482318 PHLPP1O60346 1717 aa28.05■■■□□ 2.08
RUNX1-216ENST00000482318 COL14A1Q05707 1796 aaKnown RBP28.04■■■□□ 2.08
RUNX1-216ENST00000482318 IFNL2Q8IZJ0 200 aa28.04■■■□□ 2.08
RUNX1-216ENST00000482318 BTBD11A6QL63 1104 aa28.03■■■□□ 2.08
RUNX1-216ENST00000482318 HOXB7P09629 217 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms