RNA–Protein interactions for RNA: ENST00000482143.5

TSPAN1-207, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 827 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-207ENST00000482143 CCNL1Q9UK58 526 aaPredicted RBP18.36■□□□□ 0.53
TSPAN1-207ENST00000482143 C5P01031 1676 aa18.35■□□□□ 0.53
TSPAN1-207ENST00000482143 USP31Q70CQ4 1352 aa18.35■□□□□ 0.53
TSPAN1-207ENST00000482143 MSL1Q68DK7 614 aa18.35■□□□□ 0.53
TSPAN1-207ENST00000482143 ANKRD36BQ8N2N9 1353 aa18.34■□□□□ 0.53
TSPAN1-207ENST00000482143 PRIM1P49642 420 aaKnown RBP18.34■□□□□ 0.53
TSPAN1-207ENST00000482143 NME9Q86XW9 330 aa18.34■□□□□ 0.53
TSPAN1-207ENST00000482143 LTV1Q96GA3 475 aaPredicted RBP18.34■□□□□ 0.53
TSPAN1-207ENST00000482143 RGPD2P0DJD1 1756 aa18.32■□□□□ 0.52
TSPAN1-207ENST00000482143 USP47Q96K76 1375 aa18.31■□□□□ 0.52
TSPAN1-207ENST00000482143 NEUROD1Q13562 356 aa18.31■□□□□ 0.52
TSPAN1-207ENST00000482143 COL23A1Q86Y22 540 aaPredicted RBP18.31■□□□□ 0.52
TSPAN1-207ENST00000482143 TMC1Q8TDI8 760 aa18.31■□□□□ 0.52
TSPAN1-207ENST00000482143 HDGFL2Q7Z4V5 671 aaPredicted RBP18.3■□□□□ 0.52
TSPAN1-207ENST00000482143 CD2APQ9Y5K6 639 aa18.3■□□□□ 0.52
TSPAN1-207ENST00000482143 TAF1LQ8IZX4 1826 aa18.29■□□□□ 0.52
TSPAN1-207ENST00000482143 ADCY9O60503 1353 aa18.28■□□□□ 0.52
TSPAN1-207ENST00000482143 NSD2O96028 1365 aa18.27■□□□□ 0.51
TSPAN1-207ENST00000482143 EDC4Q6P2E9 1401 aaKnown RBP18.26■□□□□ 0.51
TSPAN1-207ENST00000482143 FLAD1Q8NFF5 587 aa18.26■□□□□ 0.51
TSPAN1-207ENST00000482143 ZCRB1Q8TBF4 217 aaKnown RBP18.26■□□□□ 0.51
TSPAN1-207ENST00000482143 IP6K1Q92551 441 aa18.26■□□□□ 0.51
TSPAN1-207ENST00000482143 WWC3Q9ULE0 1092 aa18.26■□□□□ 0.51
TSPAN1-207ENST00000482143 HMGB2P26583 209 aaKnown RBP18.25■□□□□ 0.51
TSPAN1-207ENST00000482143 PUS7Q96PZ0 661 aaKnown RBP18.24■□□□□ 0.51
TSPAN1-207ENST00000482143 TERF2IPQ9NYB0 399 aa18.24■□□□□ 0.51
TSPAN1-207ENST00000482143 A0A1W2PP64 1363 aa18.24■□□□□ 0.51
TSPAN1-207ENST00000482143 CARD11Q9BXL7 1154 aa18.23■□□□□ 0.51
TSPAN1-207ENST00000482143 IGSF1Q8N6C5 1336 aa18.23■□□□□ 0.51
TSPAN1-207ENST00000482143 AMPHP49418 695 aa18.22■□□□□ 0.51
TSPAN1-207ENST00000482143 APLP1P51693 650 aa18.22■□□□□ 0.51
TSPAN1-207ENST00000482143 SLC12A5Q9H2X9 1139 aa18.22■□□□□ 0.51
TSPAN1-207ENST00000482143 MEGF6O75095 1541 aa18.22■□□□□ 0.51
TSPAN1-207ENST00000482143 C4BP0C0L5 1744 aa18.21■□□□□ 0.51
TSPAN1-207ENST00000482143 AK7Q96M32 723 aa18.2■□□□□ 0.5
TSPAN1-207ENST00000482143 UBR3Q6ZT12 1888 aa18.2■□□□□ 0.5
TSPAN1-207ENST00000482143 ITGB4P16144 1822 aa18.19■□□□□ 0.5
TSPAN1-207ENST00000482143 TESK2Q96S53 571 aa18.19■□□□□ 0.5
TSPAN1-207ENST00000482143 PALLDQ8WX93 1383 aa18.18■□□□□ 0.5
TSPAN1-207ENST00000482143 PHF14O94880 888 aa18.18■□□□□ 0.5
TSPAN1-207ENST00000482143 HOXC9P31274 260 aa18.18■□□□□ 0.5
TSPAN1-207ENST00000482143 RAPGEF4Q8WZA2 1011 aa18.18■□□□□ 0.5
TSPAN1-207ENST00000482143 COG3Q96JB2 828 aa18.18■□□□□ 0.5
TSPAN1-207ENST00000482143 SMG6Q86US8 1419 aaKnown RBP18.17■□□□□ 0.5
TSPAN1-207ENST00000482143 NSD3Q9BZ95 1437 aa18.17■□□□□ 0.5
TSPAN1-207ENST00000482143 KIF3CO14782 793 aa18.17■□□□□ 0.5
TSPAN1-207ENST00000482143 WDR90Q96KV7 1748 aa18.17■□□□□ 0.5
TSPAN1-207ENST00000482143 TOGARAM1Q9Y4F4 1720 aa18.17■□□□□ 0.5
TSPAN1-207ENST00000482143 MAP3K19Q56UN5 1328 aa18.17■□□□□ 0.5
TSPAN1-207ENST00000482143 TONSLQ96HA7 1378 aa18.17■□□□□ 0.5
TSPAN1-207ENST00000482143 MPRIPQ6WCQ1 1025 aa18.16■□□□□ 0.5
TSPAN1-207ENST00000482143 CGNL1Q0VF96 1302 aa18.16■□□□□ 0.5
TSPAN1-207ENST00000482143 USHBP1Q8N6Y0 703 aa18.15■□□□□ 0.5
TSPAN1-207ENST00000482143 TOMM70O94826 608 aa18.14■□□□□ 0.49
TSPAN1-207ENST00000482143 TATP17735 454 aaPredicted RBP18.14■□□□□ 0.49
TSPAN1-207ENST00000482143 PCDH11XQ9BZA7 1347 aa18.14■□□□□ 0.49
TSPAN1-207ENST00000482143 PCDH11YQ9BZA8 1340 aa18.14■□□□□ 0.49
TSPAN1-207ENST00000482143 N4BP2Q86UW6 1770 aaPredicted RBP18.14■□□□□ 0.49
TSPAN1-207ENST00000482143 CICQ96RK0 1608 aaPredicted RBP18.13■□□□□ 0.49
TSPAN1-207ENST00000482143 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.12■□□□□ 0.49
TSPAN1-207ENST00000482143 SMARCC1Q92922 1105 aaPredicted RBP18.12■□□□□ 0.49
TSPAN1-207ENST00000482143 CAPN15O75808 1086 aa18.11■□□□□ 0.49
TSPAN1-207ENST00000482143 FBLN1P23142 703 aa18.11■□□□□ 0.49
TSPAN1-207ENST00000482143 RTL1A6NKG5 1358 aa18.11■□□□□ 0.49
TSPAN1-207ENST00000482143 KIF20BQ96Q89 1820 aa18.11■□□□□ 0.49
TSPAN1-207ENST00000482143 ST20-MTHFSA0A0A6YYL1 179 aa18.1■□□□□ 0.49
TSPAN1-207ENST00000482143 NBPF6Q5VWK0 638 aa18.1■□□□□ 0.49
TSPAN1-207ENST00000482143 C16orf71Q8IYS4 520 aaPredicted RBP18.1■□□□□ 0.49
TSPAN1-207ENST00000482143 NBPF4Q96M43 638 aa18.1■□□□□ 0.49
TSPAN1-207ENST00000482143 KIF13BQ9NQT8 1826 aa18.09■□□□□ 0.49
TSPAN1-207ENST00000482143 SSFA2P28290 1259 aa18.08■□□□□ 0.48
TSPAN1-207ENST00000482143 RRS1Q15050 365 aaKnown RBP18.08■□□□□ 0.48
TSPAN1-207ENST00000482143 SMIM5Q71RC9 77 aa18.08■□□□□ 0.48
TSPAN1-207ENST00000482143 DNAJC5GQ8N7S2 189 aa18.08■□□□□ 0.48
TSPAN1-207ENST00000482143 BCS1LQ9Y276 419 aa18.08■□□□□ 0.48
TSPAN1-207ENST00000482143 SLC24A1O60721 1099 aa18.06■□□□□ 0.48
TSPAN1-207ENST00000482143 ARHGAP27Q6ZUM4 889 aa18.06■□□□□ 0.48
TSPAN1-207ENST00000482143 AMIGO3Q86WK7 504 aa18.06■□□□□ 0.48
TSPAN1-207ENST00000482143 PKD1L3Q7Z443 1732 aa18.06■□□□□ 0.48
TSPAN1-207ENST00000482143 KIAA1551Q9HCM1 1747 aa18.06■□□□□ 0.48
TSPAN1-207ENST00000482143 MAP2P11137 1827 aaKnown RBP18.05■□□□□ 0.48
TSPAN1-207ENST00000482143 GNPATO15228 680 aa18.05■□□□□ 0.48
TSPAN1-207ENST00000482143 NMRK2Q9NPI5 230 aa18.05■□□□□ 0.48
TSPAN1-207ENST00000482143 ANKRD26Q9UPS8 1709 aa18.04■□□□□ 0.48
TSPAN1-207ENST00000482143 PXDNLA1KZ92 1463 aa18.04■□□□□ 0.48
TSPAN1-207ENST00000482143 MMP10P09238 476 aa18.03■□□□□ 0.48
TSPAN1-207ENST00000482143 COL13A1Q5TAT6 717 aaPredicted RBP18.03■□□□□ 0.48
TSPAN1-207ENST00000482143 LOC102724428A0A0B4J2F2 783 aa18.02■□□□□ 0.48
TSPAN1-207ENST00000482143 FYB1O15117 783 aa18.02■□□□□ 0.48
TSPAN1-207ENST00000482143 CYP27B1O15528 508 aa18.02■□□□□ 0.48
TSPAN1-207ENST00000482143 BRCA1P38398 1863 aaKnown RBP18.02■□□□□ 0.48
TSPAN1-207ENST00000482143 SIK1P57059 783 aa18.02■□□□□ 0.48
TSPAN1-207ENST00000482143 TNS4Q8IZW8 715 aa18.02■□□□□ 0.48
TSPAN1-207ENST00000482143 LINC00116Q8NCU8 138 aa18.02■□□□□ 0.48
TSPAN1-207ENST00000482143 RBM46Q8TBY0 533 aaKnown RBP18.02■□□□□ 0.48
TSPAN1-207ENST00000482143 KLRG1Q96E93 195 aa18.02■□□□□ 0.48
TSPAN1-207ENST00000482143 ARFGEF1Q9Y6D6 1849 aa18.02■□□□□ 0.47
TSPAN1-207ENST00000482143 A0A0G2JLW4 131 aa18.01■□□□□ 0.47
TSPAN1-207ENST00000482143 FCHSD2O94868 740 aa18.01■□□□□ 0.47
TSPAN1-207ENST00000482143 TGFB2P61812 414 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms