RNA–Protein interactions for RNA: ENST00000482028.5

PABPC4-213, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-213ENST00000482028 NCAPD2Q15021 1401 aa16.5■□□□□ 0.23
PABPC4-213ENST00000482028 CAMTA1Q9Y6Y1 1673 aa16.5■□□□□ 0.23
PABPC4-213ENST00000482028 VAMP4O75379 141 aa16.49■□□□□ 0.23
PABPC4-213ENST00000482028 SRCAPQ6ZRS2 3230 aa16.49■□□□□ 0.23
PABPC4-213ENST00000482028 EYA1Q99502 592 aa16.49■□□□□ 0.23
PABPC4-213ENST00000482028 MBIPQ9NS73 344 aa16.49■□□□□ 0.23
PABPC4-213ENST00000482028 TWISTNBQ3B726 338 aaPredicted RBP16.48■□□□□ 0.23
PABPC4-213ENST00000482028 AMOTQ4VCS5 1084 aa16.48■□□□□ 0.23
PABPC4-213ENST00000482028 TMEM94Q12767 1356 aa16.48■□□□□ 0.23
PABPC4-213ENST00000482028 PTPRCP08575 1304 aa16.47■□□□□ 0.23
PABPC4-213ENST00000482028 GNAT3A8MTJ3 354 aa16.47■□□□□ 0.23
PABPC4-213ENST00000482028 COG6Q9Y2V7 657 aa16.47■□□□□ 0.23
PABPC4-213ENST00000482028 TOM1O60784 492 aa16.46■□□□□ 0.23
PABPC4-213ENST00000482028 TRIM27P14373 513 aa16.46■□□□□ 0.23
PABPC4-213ENST00000482028 HDAC1Q13547 482 aaPredicted RBP16.46■□□□□ 0.23
PABPC4-213ENST00000482028 KRT28Q7Z3Y7 464 aa16.46■□□□□ 0.23
PABPC4-213ENST00000482028 MAP3K5Q99683 1374 aa16.46■□□□□ 0.23
PABPC4-213ENST00000482028 CRB1P82279 1406 aa16.45■□□□□ 0.22
PABPC4-213ENST00000482028 MSH5O43196 834 aa16.45■□□□□ 0.22
PABPC4-213ENST00000482028 ARHGEF25Q86VW2 580 aa16.45■□□□□ 0.22
PABPC4-213ENST00000482028 PANK1Q8TE04 598 aa16.45■□□□□ 0.22
PABPC4-213ENST00000482028 STRCP1A6NGW2 1772 aa16.44■□□□□ 0.22
PABPC4-213ENST00000482028 GCP02774 474 aa16.44■□□□□ 0.22
PABPC4-213ENST00000482028 ANP32AP39687 249 aaKnown RBP16.44■□□□□ 0.22
PABPC4-213ENST00000482028 AEBP1Q8IUX7 1158 aa16.44■□□□□ 0.22
PABPC4-213ENST00000482028 NOB1Q9ULX3 412 aaKnown RBP16.44■□□□□ 0.22
PABPC4-213ENST00000482028 LAS1LQ9Y4W2 734 aaKnown RBP16.44■□□□□ 0.22
PABPC4-213ENST00000482028 LMO7Q8WWI1 1683 aa16.43■□□□□ 0.22
PABPC4-213ENST00000482028 EIF5BO60841 1220 aaKnown RBP16.43■□□□□ 0.22
PABPC4-213ENST00000482028 HOXB7P09629 217 aa16.43■□□□□ 0.22
PABPC4-213ENST00000482028 MRPL50Q8N5N7 158 aaKnown RBP16.43■□□□□ 0.22
PABPC4-213ENST00000482028 FOXO3O43524 673 aa16.42■□□□□ 0.22
PABPC4-213ENST00000482028 MTHFSDQ2M296 383 aaKnown RBP16.42■□□□□ 0.22
PABPC4-213ENST00000482028 TNS3Q68CZ2 1445 aa16.42■□□□□ 0.22
PABPC4-213ENST00000482028 ABCC4O15439 1325 aa16.42■□□□□ 0.22
PABPC4-213ENST00000482028 PLEKHO1Q53GL0 409 aaPredicted RBP16.41■□□□□ 0.22
PABPC4-213ENST00000482028 ITPRIPQ8IWB1 547 aa16.41■□□□□ 0.22
PABPC4-213ENST00000482028 BACH2Q9BYV9 841 aa16.41■□□□□ 0.22
PABPC4-213ENST00000482028 VIRMAQ69YN4 1812 aaKnown RBP16.4■□□□□ 0.22
PABPC4-213ENST00000482028 SOX12O15370 315 aa16.4■□□□□ 0.22
PABPC4-213ENST00000482028 ORAI2Q96SN7 254 aa16.4■□□□□ 0.22
PABPC4-213ENST00000482028 CPDO75976 1380 aa16.39■□□□□ 0.21
PABPC4-213ENST00000482028 PDE4AP27815 886 aa16.39■□□□□ 0.21
PABPC4-213ENST00000482028 TAF7Q15545 349 aaPredicted RBP16.39■□□□□ 0.21
PABPC4-213ENST00000482028 FAM161AQ3B820 660 aa16.39■□□□□ 0.21
PABPC4-213ENST00000482028 BCL2L13Q9BXK5 485 aa16.39■□□□□ 0.21
PABPC4-213ENST00000482028 ZBTB40Q9NUA8 1239 aa16.39■□□□□ 0.21
PABPC4-213ENST00000482028 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.39■□□□□ 0.21
PABPC4-213ENST00000482028 TSPYL4Q9UJ04 414 aa16.39■□□□□ 0.21
PABPC4-213ENST00000482028 CEMIPQ8WUJ3 1361 aa16.38■□□□□ 0.21
PABPC4-213ENST00000482028 RLBP1P12271 317 aa16.38■□□□□ 0.21
PABPC4-213ENST00000482028 AKAP4Q5JQC9 854 aa16.38■□□□□ 0.21
PABPC4-213ENST00000482028 XIRP1Q702N8 1843 aaKnown RBP16.38■□□□□ 0.21
PABPC4-213ENST00000482028 PXDNQ92626 1479 aa16.37■□□□□ 0.21
PABPC4-213ENST00000482028 GCC1Q96CN9 775 aa16.37■□□□□ 0.21
PABPC4-213ENST00000482028 STK31Q9BXU1 1019 aa16.37■□□□□ 0.21
PABPC4-213ENST00000482028 CCDC30Q5VVM6 783 aa16.36■□□□□ 0.21
PABPC4-213ENST00000482028 INTS3Q68E01 1043 aaKnown RBP16.36■□□□□ 0.21
PABPC4-213ENST00000482028 CRYBG1Q9Y4K1 1723 aa16.36■□□□□ 0.21
PABPC4-213ENST00000482028 N4BP2Q86UW6 1770 aaPredicted RBP16.36■□□□□ 0.21
PABPC4-213ENST00000482028 PXDNLA1KZ92 1463 aa16.35■□□□□ 0.21
PABPC4-213ENST00000482028 FAM83GA6ND36 823 aa16.35■□□□□ 0.21
PABPC4-213ENST00000482028 NUTM2GQ5VZR2 741 aa16.35■□□□□ 0.21
PABPC4-213ENST00000482028 POTEAQ6S8J7 498 aa16.35■□□□□ 0.21
PABPC4-213ENST00000482028 MCM10Q7L590 875 aa16.35■□□□□ 0.21
PABPC4-213ENST00000482028 TMEM57Q8N5G2 664 aa16.35■□□□□ 0.21
PABPC4-213ENST00000482028 C8orf58Q8NAV2 365 aa16.35■□□□□ 0.21
PABPC4-213ENST00000482028 DDRGK1Q96HY6 314 aa16.35■□□□□ 0.21
PABPC4-213ENST00000482028 THUMPD2Q9BTF0 503 aaKnown RBP16.35■□□□□ 0.21
PABPC4-213ENST00000482028 ADAMTS7Q9UKP4 1686 aa16.34■□□□□ 0.21
PABPC4-213ENST00000482028 CCT4P50991 539 aaKnown RBP16.34■□□□□ 0.21
PABPC4-213ENST00000482028 C1orf141Q5JVX7 400 aa16.34■□□□□ 0.21
PABPC4-213ENST00000482028 SMC5Q8IY18 1101 aa16.34■□□□□ 0.21
PABPC4-213ENST00000482028 SPATA31A3Q5VYP0 1347 aa16.34■□□□□ 0.21
PABPC4-213ENST00000482028 KDM3BQ7LBC6 1761 aa16.33■□□□□ 0.21
PABPC4-213ENST00000482028 ANKRD24Q8TF21 1146 aa16.33■□□□□ 0.2
PABPC4-213ENST00000482028 ZBTB7BO15156 539 aaPredicted RBP16.32■□□□□ 0.2
PABPC4-213ENST00000482028 IGHDP01880 384 aa16.32■□□□□ 0.2
PABPC4-213ENST00000482028 ERBB3P21860 1342 aa16.32■□□□□ 0.2
PABPC4-213ENST00000482028 COL18A1P39060 1754 aa16.32■□□□□ 0.2
PABPC4-213ENST00000482028 TSPYL6Q8N831 410 aa16.32■□□□□ 0.2
PABPC4-213ENST00000482028 PCDHB15Q9Y5E8 787 aa16.32■□□□□ 0.2
PABPC4-213ENST00000482028 HSP90AB1P08238 724 aaKnown RBP16.31■□□□□ 0.2
PABPC4-213ENST00000482028 DCTN1Q14203 1278 aa16.31■□□□□ 0.2
PABPC4-213ENST00000482028 NBPF6Q5VWK0 638 aa16.31■□□□□ 0.2
PABPC4-213ENST00000482028 RPAP2Q8IXW5 612 aaPredicted RBP16.31■□□□□ 0.2
PABPC4-213ENST00000482028 NBPF4Q96M43 638 aa16.31■□□□□ 0.2
PABPC4-213ENST00000482028 TEFQ10587 303 aa16.3■□□□□ 0.2
PABPC4-213ENST00000482028 LMOD2Q6P5Q4 547 aa16.3■□□□□ 0.2
PABPC4-213ENST00000482028 RBM33Q96EV2 1170 aaKnown RBP16.3■□□□□ 0.2
PABPC4-213ENST00000482028 HDAC5Q9UQL6 1122 aa16.3■□□□□ 0.2
PABPC4-213ENST00000482028 SOS2Q07890 1332 aaPredicted RBP16.29■□□□□ 0.2
PABPC4-213ENST00000482028 RAPGEF4Q8WZA2 1011 aa16.29■□□□□ 0.2
PABPC4-213ENST00000482028 LTV1Q96GA3 475 aaPredicted RBP16.29■□□□□ 0.2
PABPC4-213ENST00000482028 IPO9Q96P70 1041 aaKnown RBP16.29■□□□□ 0.2
PABPC4-213ENST00000482028 UPF2Q9HAU5 1272 aaKnown RBP16.29■□□□□ 0.2
PABPC4-213ENST00000482028 SPG7Q9UQ90 795 aa16.29■□□□□ 0.2
PABPC4-213ENST00000482028 RGPD2P0DJD1 1756 aa16.28■□□□□ 0.2
PABPC4-213ENST00000482028 IBTKQ9P2D0 1353 aaPredicted RBP16.28■□□□□ 0.2
PABPC4-213ENST00000482028 NHSL1Q5SYE7 1610 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms