RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 GNAT3A8MTJ3 354 aa15.03■□□□□ -0
GGPS1-205ENST00000482013 IPO8O15397 1037 aaKnown RBP15.03■□□□□ -0
GGPS1-205ENST00000482013 VAMP4O75379 141 aa15.03■□□□□ -0
GGPS1-205ENST00000482013 AMOTQ4VCS5 1084 aa15.03■□□□□ -0
GGPS1-205ENST00000482013 ZKSCAN2Q63HK3 967 aa15.03■□□□□ -0
GGPS1-205ENST00000482013 ANKRD24Q8TF21 1146 aa15.03■□□□□ -0
GGPS1-205ENST00000482013 THUMPD2Q9BTF0 503 aaKnown RBP15.03■□□□□ -0
GGPS1-205ENST00000482013 LMO7Q8WWI1 1683 aa15.03■□□□□ -0
GGPS1-205ENST00000482013 MAP3K5Q99683 1374 aa15.02■□□□□ -0
GGPS1-205ENST00000482013 DDX17Q92841 729 aaKnown RBP15.02■□□□□ -0
GGPS1-205ENST00000482013 SMC4Q9NTJ3 1288 aa15.02■□□□□ -0
GGPS1-205ENST00000482013 DCTN1Q14203 1278 aa15.01□□□□□ -0.01
GGPS1-205ENST00000482013 PLEKHO1Q53GL0 409 aaPredicted RBP15.01□□□□□ -0.01
GGPS1-205ENST00000482013 SSH1Q8WYL5 1049 aa15.01□□□□□ -0.01
GGPS1-205ENST00000482013 ARHGAP45Q92619 1136 aa15.01□□□□□ -0.01
GGPS1-205ENST00000482013 FRAT1Q92837 279 aaPredicted RBP15.01□□□□□ -0.01
GGPS1-205ENST00000482013 SOS1Q07889 1333 aaPredicted RBP15□□□□□ -0.01
GGPS1-205ENST00000482013 ZBTB7CA1YPR0 619 aa15□□□□□ -0.01
GGPS1-205ENST00000482013 MCM10Q7L590 875 aa15□□□□□ -0.01
GGPS1-205ENST00000482013 ERBB3P21860 1342 aa14.99□□□□□ -0.01
GGPS1-205ENST00000482013 ZC3H6P61129 1189 aaKnown RBP14.99□□□□□ -0.01
GGPS1-205ENST00000482013 TWISTNBQ3B726 338 aaPredicted RBP14.99□□□□□ -0.01
GGPS1-205ENST00000482013 AXIN2Q9Y2T1 843 aa14.99□□□□□ -0.01
GGPS1-205ENST00000482013 LTBP4Q8N2S1 1624 aa14.99□□□□□ -0.01
GGPS1-205ENST00000482013 ATF7IPQ6VMQ6 1270 aa14.98□□□□□ -0.01
GGPS1-205ENST00000482013 DZIP1LQ8IYY4 767 aaKnown RBP14.98□□□□□ -0.01
GGPS1-205ENST00000482013 OVOS2A0A0G2JMS6 1433 aa14.98□□□□□ -0.01
GGPS1-205ENST00000482013 AKAP4Q5JQC9 854 aa14.97□□□□□ -0.01
GGPS1-205ENST00000482013 MRPL50Q8N5N7 158 aaKnown RBP14.97□□□□□ -0.01
GGPS1-205ENST00000482013 USHBP1Q8N6Y0 703 aa14.97□□□□□ -0.01
GGPS1-205ENST00000482013 LRRC59Q96AG4 307 aaKnown RBP14.97□□□□□ -0.01
GGPS1-205ENST00000482013 CEMIPQ8WUJ3 1361 aa14.97□□□□□ -0.01
GGPS1-205ENST00000482013 TAF7Q15545 349 aaPredicted RBP14.96□□□□□ -0.01
GGPS1-205ENST00000482013 CENPQQ7L2Z9 268 aaPredicted RBP14.96□□□□□ -0.01
GGPS1-205ENST00000482013 TSPYL6Q8N831 410 aa14.96□□□□□ -0.01
GGPS1-205ENST00000482013 C8orf58Q8NAV2 365 aa14.96□□□□□ -0.01
GGPS1-205ENST00000482013 PANK1Q8TE04 598 aa14.96□□□□□ -0.01
GGPS1-205ENST00000482013 ABCA3Q99758 1704 aa14.96□□□□□ -0.01
GGPS1-205ENST00000482013 BCL2L13Q9BXK5 485 aa14.96□□□□□ -0.01
GGPS1-205ENST00000482013 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.96□□□□□ -0.01
GGPS1-205ENST00000482013 NOB1Q9ULX3 412 aaKnown RBP14.96□□□□□ -0.01
GGPS1-205ENST00000482013 CACNA1FO60840 1977 aa14.95□□□□□ -0.02
GGPS1-205ENST00000482013 MVPQ14764 893 aaKnown RBP14.95□□□□□ -0.02
GGPS1-205ENST00000482013 FTSJ3Q8IY81 847 aaKnown RBP14.95□□□□□ -0.02
GGPS1-205ENST00000482013 IL17REQ8NFR9 667 aa14.95□□□□□ -0.02
GGPS1-205ENST00000482013 CLUAP1Q96AJ1 413 aa14.95□□□□□ -0.02
GGPS1-205ENST00000482013 CHMP4BQ9H444 224 aaKnown RBP14.95□□□□□ -0.02
GGPS1-205ENST00000482013 TSPYL4Q9UJ04 414 aa14.95□□□□□ -0.02
GGPS1-205ENST00000482013 COG6Q9Y2V7 657 aa14.95□□□□□ -0.02
GGPS1-205ENST00000482013 AHDC1Q5TGY3 1603 aaPredicted RBP14.95□□□□□ -0.02
GGPS1-205ENST00000482013 TRIM27P14373 513 aa14.94□□□□□ -0.02
GGPS1-205ENST00000482013 CABLES1Q8TDN4 633 aa14.94□□□□□ -0.02
GGPS1-205ENST00000482013 CHMP4AQ9BY43 222 aa14.94□□□□□ -0.02
GGPS1-205ENST00000482013 VIRMAQ69YN4 1812 aaKnown RBP14.94□□□□□ -0.02
GGPS1-205ENST00000482013 KDM2BQ8NHM5 1336 aa14.93□□□□□ -0.02
GGPS1-205ENST00000482013 RLBP1P12271 317 aa14.93□□□□□ -0.02
GGPS1-205ENST00000482013 C1orf141Q5JVX7 400 aa14.93□□□□□ -0.02
GGPS1-205ENST00000482013 ZNF530Q6P9A1 599 aaPredicted RBP14.93□□□□□ -0.02
GGPS1-205ENST00000482013 RAPGEF4Q8WZA2 1011 aa14.93□□□□□ -0.02
GGPS1-205ENST00000482013 DDX19BQ9UMR2 479 aa14.93□□□□□ -0.02
GGPS1-205ENST00000482013 ADAMTS7Q9UKP4 1686 aa14.93□□□□□ -0.02
GGPS1-205ENST00000482013 TATP17735 454 aaPredicted RBP14.92□□□□□ -0.02
GGPS1-205ENST00000482013 API5Q9BZZ5 524 aaKnown RBP14.92□□□□□ -0.02
GGPS1-205ENST00000482013 TSHZ2Q9NRE2 1034 aa14.92□□□□□ -0.02
GGPS1-205ENST00000482013 NLRP2Q9NX02 1062 aa14.92□□□□□ -0.02
GGPS1-205ENST00000482013 ROBO1Q9Y6N7 1651 aa14.91□□□□□ -0.02
GGPS1-205ENST00000482013 PLEKHG5O94827 1062 aa14.91□□□□□ -0.02
GGPS1-205ENST00000482013 SPG7Q9UQ90 795 aa14.91□□□□□ -0.02
GGPS1-205ENST00000482013 ELL2O00472 640 aaPredicted RBP14.9□□□□□ -0.02
GGPS1-205ENST00000482013 RNMTO43148 476 aaKnown RBP14.9□□□□□ -0.02
GGPS1-205ENST00000482013 CSB-PGBD3P0DP91 1061 aa14.9□□□□□ -0.02
GGPS1-205ENST00000482013 PRDM11Q9NQV5 511 aa14.9□□□□□ -0.02
GGPS1-205ENST00000482013 COL22A1Q8NFW1 1626 aaPredicted RBP14.9□□□□□ -0.02
GGPS1-205ENST00000482013 KDM3BQ7LBC6 1761 aa14.9□□□□□ -0.02
GGPS1-205ENST00000482013 PTPRCP08575 1304 aa14.9□□□□□ -0.02
GGPS1-205ENST00000482013 PKD1L3Q7Z443 1732 aa14.89□□□□□ -0.03
GGPS1-205ENST00000482013 TCERG1O14776 1098 aaKnown RBP14.89□□□□□ -0.03
GGPS1-205ENST00000482013 HOXB7P09629 217 aa14.89□□□□□ -0.03
GGPS1-205ENST00000482013 CHRNA2Q15822 529 aa14.89□□□□□ -0.03
GGPS1-205ENST00000482013 TNNQ9UQP3 1299 aa14.89□□□□□ -0.03
GGPS1-205ENST00000482013 WDR17Q8IZU2 1322 aa14.89□□□□□ -0.03
GGPS1-205ENST00000482013 TEFQ10587 303 aa14.88□□□□□ -0.03
GGPS1-205ENST00000482013 ABCC4O15439 1325 aa14.88□□□□□ -0.03
GGPS1-205ENST00000482013 SIPA1L3O60292 1781 aaPredicted RBP14.88□□□□□ -0.03
GGPS1-205ENST00000482013 SCN11AQ9UI33 1791 aa14.88□□□□□ -0.03
GGPS1-205ENST00000482013 PARP4Q9UKK3 1724 aaKnown RBP14.87□□□□□ -0.03
GGPS1-205ENST00000482013 CCDC30Q5VVM6 783 aa14.87□□□□□ -0.03
GGPS1-205ENST00000482013 RWDD1Q9H446 243 aaPredicted RBP14.87□□□□□ -0.03
GGPS1-205ENST00000482013 LGR6Q9HBX8 967 aa14.87□□□□□ -0.03
GGPS1-205ENST00000482013 HSP90AB1P08238 724 aaKnown RBP14.86□□□□□ -0.03
GGPS1-205ENST00000482013 ITPRIPQ8IWB1 547 aa14.86□□□□□ -0.03
GGPS1-205ENST00000482013 IFNL2Q8IZJ0 200 aa14.86□□□□□ -0.03
GGPS1-205ENST00000482013 TMEM57Q8N5G2 664 aa14.86□□□□□ -0.03
GGPS1-205ENST00000482013 MIS18AQ9NYP9 233 aa14.86□□□□□ -0.03
GGPS1-205ENST00000482013 COL5A2P05997 1499 aaPredicted RBP14.86□□□□□ -0.03
GGPS1-205ENST00000482013 KRT24Q2M2I5 525 aa14.85□□□□□ -0.03
GGPS1-205ENST00000482013 CARD10Q9BWT7 1032 aa14.85□□□□□ -0.03
GGPS1-205ENST00000482013 STK31Q9BXU1 1019 aa14.85□□□□□ -0.03
GGPS1-205ENST00000482013 ZBTB40Q9NUA8 1239 aa14.85□□□□□ -0.03
GGPS1-205ENST00000482013 COL14A1Q05707 1796 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms