RNA–Protein interactions for RNA: ENST00000481980.1

NUP58-212, Transcript of nucleoporin 58, humanhuman

TSL 3

Gene NUP58, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-212ENST00000481980 SYTL4Q96C24 671 aaPredicted RBP23.42■■□□□ 1.34
NUP58-212ENST00000481980 GGNBP2Q9H3C7 697 aa23.42■■□□□ 1.34
NUP58-212ENST00000481980 RRS1Q15050 365 aaKnown RBP23.41■■□□□ 1.34
NUP58-212ENST00000481980 USP47Q96K76 1375 aa23.4■■□□□ 1.34
NUP58-212ENST00000481980 NBPF6Q5VWK0 638 aa23.4■■□□□ 1.34
NUP58-212ENST00000481980 SLC16A10Q8TF71 515 aa23.4■■□□□ 1.34
NUP58-212ENST00000481980 NBPF4Q96M43 638 aa23.4■■□□□ 1.34
NUP58-212ENST00000481980 MEGF6O75095 1541 aa23.39■■□□□ 1.34
NUP58-212ENST00000481980 MAP3K5Q99683 1374 aa23.39■■□□□ 1.33
NUP58-212ENST00000481980 NSD2O96028 1365 aa23.38■■□□□ 1.33
NUP58-212ENST00000481980 RGPD2P0DJD1 1756 aa23.37■■□□□ 1.33
NUP58-212ENST00000481980 CGNL1Q0VF96 1302 aa23.37■■□□□ 1.33
NUP58-212ENST00000481980 KCNQ4P56696 695 aa23.37■■□□□ 1.33
NUP58-212ENST00000481980 PNPLA7Q6ZV29 1317 aa23.36■■□□□ 1.33
NUP58-212ENST00000481980 CDCA8Q53HL2 280 aa23.36■■□□□ 1.33
NUP58-212ENST00000481980 USHBP1Q8N6Y0 703 aa23.36■■□□□ 1.33
NUP58-212ENST00000481980 TFCP2L1Q9NZI6 479 aa23.36■■□□□ 1.33
NUP58-212ENST00000481980 SMG6Q86US8 1419 aaKnown RBP23.35■■□□□ 1.33
NUP58-212ENST00000481980 RAPGEF4Q8WZA2 1011 aa23.35■■□□□ 1.33
NUP58-212ENST00000481980 DOT1LQ8TEK3 1739 aa23.35■■□□□ 1.33
NUP58-212ENST00000481980 SHANK3Q9BYB0 1731 aa23.34■■□□□ 1.33
NUP58-212ENST00000481980 GOLGB1Q14789 3259 aaKnown RBP23.34■■□□□ 1.33
NUP58-212ENST00000481980 QSER1Q2KHR3 1735 aa23.33■■□□□ 1.33
NUP58-212ENST00000481980 INSRP06213 1382 aa23.33■■□□□ 1.33
NUP58-212ENST00000481980 POLD1P28340 1107 aa23.33■■□□□ 1.33
NUP58-212ENST00000481980 ZEB1P37275 1124 aaPredicted RBP23.33■■□□□ 1.33
NUP58-212ENST00000481980 HSP90AB2PQ58FF8 381 aa23.33■■□□□ 1.33
NUP58-212ENST00000481980 TATP17735 454 aaPredicted RBP23.32■■□□□ 1.32
NUP58-212ENST00000481980 CCNL1Q9UK58 526 aaPredicted RBP23.32■■□□□ 1.32
NUP58-212ENST00000481980 LY75O60449 1722 aa23.31■■□□□ 1.32
NUP58-212ENST00000481980 KIF24Q5T7B8 1368 aa23.31■■□□□ 1.32
NUP58-212ENST00000481980 ZNF784Q8NCA9 323 aaPredicted RBP23.31■■□□□ 1.32
NUP58-212ENST00000481980 FLT4P35916 1363 aa23.3■■□□□ 1.32
NUP58-212ENST00000481980 CARD14Q9BXL6 1004 aa23.3■■□□□ 1.32
NUP58-212ENST00000481980 COL24A1Q17RW2 1714 aa23.28■■□□□ 1.32
NUP58-212ENST00000481980 GPR162Q16538 588 aa23.27■■□□□ 1.32
NUP58-212ENST00000481980 PCDH11XQ9BZA7 1347 aa23.27■■□□□ 1.32
NUP58-212ENST00000481980 PCDH11YQ9BZA8 1340 aa23.27■■□□□ 1.32
NUP58-212ENST00000481980 KIF20BQ96Q89 1820 aa23.26■■□□□ 1.31
NUP58-212ENST00000481980 KLHL34Q8N239 644 aa23.26■■□□□ 1.31
NUP58-212ENST00000481980 TUBGCP6Q96RT7 1819 aa23.26■■□□□ 1.31
NUP58-212ENST00000481980 NSD3Q9BZ95 1437 aa23.25■■□□□ 1.31
NUP58-212ENST00000481980 MSH5O43196 834 aa23.24■■□□□ 1.31
NUP58-212ENST00000481980 COL23A1Q86Y22 540 aaPredicted RBP23.24■■□□□ 1.31
NUP58-212ENST00000481980 EMILIN1Q9Y6C2 1016 aa23.24■■□□□ 1.31
NUP58-212ENST00000481980 CYP27B1O15528 508 aa23.23■■□□□ 1.31
NUP58-212ENST00000481980 TIMELESSQ9UNS1 1208 aa23.23■■□□□ 1.31
NUP58-212ENST00000481980 CHD4Q14839 1912 aa23.22■■□□□ 1.31
NUP58-212ENST00000481980 HMGB2P26583 209 aaKnown RBP23.22■■□□□ 1.31
NUP58-212ENST00000481980 MPRIPQ6WCQ1 1025 aa23.22■■□□□ 1.31
NUP58-212ENST00000481980 PALLDQ8WX93 1383 aa23.2■■□□□ 1.3
NUP58-212ENST00000481980 NLGN2Q8NFZ4 835 aa23.2■■□□□ 1.3
NUP58-212ENST00000481980 PPM1GO15355 546 aaPredicted RBP23.19■■□□□ 1.3
NUP58-212ENST00000481980 WASHC2AQ641Q2 1341 aa23.18■■□□□ 1.3
NUP58-212ENST00000481980 PELP1Q8IZL8 1130 aaKnown RBP23.18■■□□□ 1.3
NUP58-212ENST00000481980 FLAD1Q8NFF5 587 aa23.18■■□□□ 1.3
NUP58-212ENST00000481980 NCAPD2Q15021 1401 aa23.17■■□□□ 1.3
NUP58-212ENST00000481980 SMARCC1Q92922 1105 aaPredicted RBP23.17■■□□□ 1.3
NUP58-212ENST00000481980 NKX1-1Q15270 411 aaPredicted RBP23.16■■□□□ 1.3
NUP58-212ENST00000481980 MSL1Q68DK7 614 aa23.16■■□□□ 1.3
NUP58-212ENST00000481980 SPG7Q9UQ90 795 aa23.16■■□□□ 1.3
NUP58-212ENST00000481980 C5P01031 1676 aa23.16■■□□□ 1.3
NUP58-212ENST00000481980 PIGBQ92521 554 aa23.15■■□□□ 1.3
NUP58-212ENST00000481980 PKD1L3Q7Z443 1732 aa23.14■■□□□ 1.3
NUP58-212ENST00000481980 EYA1Q99502 592 aa23.14■■□□□ 1.29
NUP58-212ENST00000481980 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.13■■□□□ 1.29
NUP58-212ENST00000481980 POLKQ9UBT6 870 aa23.13■■□□□ 1.29
NUP58-212ENST00000481980 TOGARAM1Q9Y4F4 1720 aa23.13■■□□□ 1.29
NUP58-212ENST00000481980 ANKRD26Q9UPS8 1709 aa23.12■■□□□ 1.29
NUP58-212ENST00000481980 ITGB4P16144 1822 aa23.11■■□□□ 1.29
NUP58-212ENST00000481980 GRIN3BO60391 1043 aa23.11■■□□□ 1.29
NUP58-212ENST00000481980 YBX3P16989 372 aaKnown RBP eCLIP23.11■■□□□ 1.29
NUP58-212ENST00000481980 AK7Q96M32 723 aa23.11■■□□□ 1.29
NUP58-212ENST00000481980 TAF1LQ8IZX4 1826 aa23.1■■□□□ 1.29
NUP58-212ENST00000481980 CD2APQ9Y5K6 639 aa23.1■■□□□ 1.29
NUP58-212ENST00000481980 C1QTNF8P60827 252 aa23.09■■□□□ 1.29
NUP58-212ENST00000481980 POLR3GLQ9BT43 218 aa23.09■■□□□ 1.29
NUP58-212ENST00000481980 C4BP0C0L5 1744 aa23.08■■□□□ 1.29
NUP58-212ENST00000481980 AMIGO3Q86WK7 504 aa23.08■■□□□ 1.29
NUP58-212ENST00000481980 TMOD3Q9NYL9 352 aa23.08■■□□□ 1.29
NUP58-212ENST00000481980 MAP2P11137 1827 aaKnown RBP23.08■■□□□ 1.28
NUP58-212ENST00000481980 LOC102724428A0A0B4J2F2 783 aa23.07■■□□□ 1.28
NUP58-212ENST00000481980 PHKG2P15735 406 aa23.07■■□□□ 1.28
NUP58-212ENST00000481980 SIK1P57059 783 aa23.07■■□□□ 1.28
NUP58-212ENST00000481980 IFNL2Q8IZJ0 200 aa23.07■■□□□ 1.28
NUP58-212ENST00000481980 TNNT2P45379 298 aaPredicted RBP23.06■■□□□ 1.28
NUP58-212ENST00000481980 EIF4A2Q14240 407 aaKnown RBP23.06■■□□□ 1.28
NUP58-212ENST00000481980 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.05■■□□□ 1.28
NUP58-212ENST00000481980 ASAP1Q9ULH1 1129 aa23.05■■□□□ 1.28
NUP58-212ENST00000481980 PHF14O94880 888 aa23.04■■□□□ 1.28
NUP58-212ENST00000481980 SSFA2P28290 1259 aa23.04■■□□□ 1.28
NUP58-212ENST00000481980 SMIM5Q71RC9 77 aa23.04■■□□□ 1.28
NUP58-212ENST00000481980 LINC00116Q8NCU8 138 aa23.04■■□□□ 1.28
NUP58-212ENST00000481980 SENP3-EIF4A1A0A087X0R7 540 aa23.02■■□□□ 1.28
NUP58-212ENST00000481980 GIGYF1O75420 1035 aaPredicted RBP23.02■■□□□ 1.28
NUP58-212ENST00000481980 UBR3Q6ZT12 1888 aa23.02■■□□□ 1.28
NUP58-212ENST00000481980 PLEKHG2Q9H7P9 1386 aa23.01■■□□□ 1.27
NUP58-212ENST00000481980 EIF4G2P78344 907 aaKnown RBP eCLIP23.01■■□□□ 1.27
NUP58-212ENST00000481980 ITPK1Q13572 414 aa23.01■■□□□ 1.27
NUP58-212ENST00000481980 ATG3Q9NT62 314 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms