RNA–Protein interactions for RNA: ENST00000481738.1

LINC00544-202, long intergenic non-protein coding RNA 544, humanhuman

TSL 3 BASIC

Gene LINC00544, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-202ENST00000481738 PLSCR1O15162 318 aa12.32□□□□□ -0.44
LINC00544-202ENST00000481738 TATP17735 454 aaPredicted RBP12.32□□□□□ -0.44
LINC00544-202ENST00000481738 MORC1Q86VD1 984 aa12.32□□□□□ -0.44
LINC00544-202ENST00000481738 RGPD3A6NKT7 1758 aaPredicted RBP12.31□□□□□ -0.44
LINC00544-202ENST00000481738 RGPD4Q7Z3J3 1758 aa12.31□□□□□ -0.44
LINC00544-202ENST00000481738 NBPF14Q5TI25 921 aa12.31□□□□□ -0.44
LINC00544-202ENST00000481738 SHANK3Q9BYB0 1731 aa12.31□□□□□ -0.44
LINC00544-202ENST00000481738 KAT6BQ8WYB5 2073 aa12.3□□□□□ -0.44
LINC00544-202ENST00000481738 EYA1Q99502 592 aa12.3□□□□□ -0.44
LINC00544-202ENST00000481738 EIF4A2Q14240 407 aaKnown RBP12.29□□□□□ -0.44
LINC00544-202ENST00000481738 AMER1Q5JTC6 1135 aaPredicted RBP12.29□□□□□ -0.44
LINC00544-202ENST00000481738 PROM2Q8N271 834 aa12.29□□□□□ -0.44
LINC00544-202ENST00000481738 BTAF1O14981 1849 aa12.28□□□□□ -0.44
LINC00544-202ENST00000481738 TXNRD1Q16881 649 aa12.28□□□□□ -0.44
LINC00544-202ENST00000481738 SYTL4Q96C24 671 aaPredicted RBP12.28□□□□□ -0.44
LINC00544-202ENST00000481738 DOT1LQ8TEK3 1739 aa12.28□□□□□ -0.44
LINC00544-202ENST00000481738 NCAPD2Q15021 1401 aa12.28□□□□□ -0.44
LINC00544-202ENST00000481738 PER1O15534 1290 aaPredicted RBP12.27□□□□□ -0.45
LINC00544-202ENST00000481738 PRIM1P49642 420 aaKnown RBP12.27□□□□□ -0.45
LINC00544-202ENST00000481738 PCDH11XQ9BZA7 1347 aa12.27□□□□□ -0.45
LINC00544-202ENST00000481738 PCDH11YQ9BZA8 1340 aa12.27□□□□□ -0.45
LINC00544-202ENST00000481738 CC2D1BQ5T0F9 858 aaKnown RBP12.26□□□□□ -0.45
LINC00544-202ENST00000481738 ANO8Q9HCE9 1232 aaPredicted RBP12.26□□□□□ -0.45
LINC00544-202ENST00000481738 PKD1L3Q7Z443 1732 aa12.25□□□□□ -0.45
LINC00544-202ENST00000481738 CNGB1Q14028 1251 aaPredicted RBP12.25□□□□□ -0.45
LINC00544-202ENST00000481738 LRP5O75197 1615 aa12.25□□□□□ -0.45
LINC00544-202ENST00000481738 CYP27B1O15528 508 aa12.24□□□□□ -0.45
LINC00544-202ENST00000481738 IGSF1Q8N6C5 1336 aa12.24□□□□□ -0.45
LINC00544-202ENST00000481738 SPG7Q9UQ90 795 aa12.24□□□□□ -0.45
LINC00544-202ENST00000481738 STK32BQ9NY57 414 aa12.23□□□□□ -0.45
LINC00544-202ENST00000481738 MTHFSP49914 203 aa12.22□□□□□ -0.45
LINC00544-202ENST00000481738 NPC1L1Q9UHC9 1359 aa12.21□□□□□ -0.45
LINC00544-202ENST00000481738 SLC15A2Q16348 729 aa12.21□□□□□ -0.45
LINC00544-202ENST00000481738 LRRC4BQ9NT99 713 aa12.21□□□□□ -0.45
LINC00544-202ENST00000481738 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.21□□□□□ -0.45
LINC00544-202ENST00000481738 TOGARAM1Q9Y4F4 1720 aa12.2□□□□□ -0.46
LINC00544-202ENST00000481738 PAPPAQ13219 1627 aa12.2□□□□□ -0.46
LINC00544-202ENST00000481738 PHKG2P15735 406 aa12.2□□□□□ -0.46
LINC00544-202ENST00000481738 IL13P35225 146 aa12.2□□□□□ -0.46
LINC00544-202ENST00000481738 KCNQ4P56696 695 aa12.2□□□□□ -0.46
LINC00544-202ENST00000481738 SLC27A3Q5K4L6 730 aa12.2□□□□□ -0.46
LINC00544-202ENST00000481738 MPRIPQ6WCQ1 1025 aa12.2□□□□□ -0.46
LINC00544-202ENST00000481738 AEBP1Q8IUX7 1158 aa12.2□□□□□ -0.46
LINC00544-202ENST00000481738 IFNL2Q8IZJ0 200 aa12.2□□□□□ -0.46
LINC00544-202ENST00000481738 LY75O60449 1722 aa12.2□□□□□ -0.46
LINC00544-202ENST00000481738 NKX1-1Q15270 411 aaPredicted RBP12.19□□□□□ -0.46
LINC00544-202ENST00000481738 SULT6B1Q6IMI4 303 aa12.19□□□□□ -0.46
LINC00544-202ENST00000481738 PDGFDQ9GZP0 370 aaPredicted RBP12.19□□□□□ -0.46
LINC00544-202ENST00000481738 CASZ1Q86V15 1759 aa12.19□□□□□ -0.46
LINC00544-202ENST00000481738 PLEKHG2Q9H7P9 1386 aa12.18□□□□□ -0.46
LINC00544-202ENST00000481738 ITGB4P16144 1822 aa12.18□□□□□ -0.46
LINC00544-202ENST00000481738 ZNF827Q17R98 1081 aa12.18□□□□□ -0.46
LINC00544-202ENST00000481738 PLEKHO1Q53GL0 409 aaPredicted RBP12.18□□□□□ -0.46
LINC00544-202ENST00000481738 SPON1Q9HCB6 807 aa12.18□□□□□ -0.46
LINC00544-202ENST00000481738 CCNL1Q9UK58 526 aaPredicted RBP12.17□□□□□ -0.46
LINC00544-202ENST00000481738 PALLDQ8WX93 1383 aa12.17□□□□□ -0.46
LINC00544-202ENST00000481738 DIAPH1O60610 1272 aaKnown RBP12.16□□□□□ -0.46
LINC00544-202ENST00000481738 ZBTB7AO95365 584 aa12.16□□□□□ -0.46
LINC00544-202ENST00000481738 AMOTQ4VCS5 1084 aa12.16□□□□□ -0.46
LINC00544-202ENST00000481738 ZNF530Q6P9A1 599 aaPredicted RBP12.16□□□□□ -0.46
LINC00544-202ENST00000481738 PIGBQ92521 554 aa12.16□□□□□ -0.46
LINC00544-202ENST00000481738 AKT1S1Q96B36 256 aa12.16□□□□□ -0.46
LINC00544-202ENST00000481738 KDRP35968 1356 aa12.16□□□□□ -0.46
LINC00544-202ENST00000481738 HMOX1P09601 288 aa12.15□□□□□ -0.46
LINC00544-202ENST00000481738 SMARCC1Q92922 1105 aaPredicted RBP12.15□□□□□ -0.46
LINC00544-202ENST00000481738 TMOD3Q9NYL9 352 aa12.15□□□□□ -0.46
LINC00544-202ENST00000481738 HSP90AB1P08238 724 aaKnown RBP12.14□□□□□ -0.47
LINC00544-202ENST00000481738 PPP1R1BQ9UD71 204 aaPredicted RBP12.14□□□□□ -0.47
LINC00544-202ENST00000481738 ATF5Q9Y2D1 282 aaPredicted RBP12.14□□□□□ -0.47
LINC00544-202ENST00000481738 COL3A1P02461 1466 aaPredicted RBP12.14□□□□□ -0.47
LINC00544-202ENST00000481738 C1orf141Q5JVX7 400 aa12.13□□□□□ -0.47
LINC00544-202ENST00000481738 DCAF5Q96JK2 942 aa12.13□□□□□ -0.47
LINC00544-202ENST00000481738 TFCP2L1Q9NZI6 479 aa12.13□□□□□ -0.47
LINC00544-202ENST00000481738 KDM6AO15550 1401 aaPredicted RBP12.12□□□□□ -0.47
LINC00544-202ENST00000481738 TUBGCP6Q96RT7 1819 aa12.12□□□□□ -0.47
LINC00544-202ENST00000481738 ERVV-2B6SEH9 535 aa12.12□□□□□ -0.47
LINC00544-202ENST00000481738 U2SURPO15042 1029 aaKnown RBP12.12□□□□□ -0.47
LINC00544-202ENST00000481738 MTFR1LQ9H019 292 aa12.12□□□□□ -0.47
LINC00544-202ENST00000481738 ASAP1Q9ULH1 1129 aa12.12□□□□□ -0.47
LINC00544-202ENST00000481738 C5P01031 1676 aa12.12□□□□□ -0.47
LINC00544-202ENST00000481738 PNPLA7Q6ZV29 1317 aa12.11□□□□□ -0.47
LINC00544-202ENST00000481738 QSER1Q2KHR3 1735 aa12.11□□□□□ -0.47
LINC00544-202ENST00000481738 PPP2R1AP30153 589 aa12.11□□□□□ -0.47
LINC00544-202ENST00000481738 CABP4P57796 275 aa12.11□□□□□ -0.47
LINC00544-202ENST00000481738 CFAP53Q96M91 514 aa12.11□□□□□ -0.47
LINC00544-202ENST00000481738 ATG3Q9NT62 314 aa12.11□□□□□ -0.47
LINC00544-202ENST00000481738 TAF1LQ8IZX4 1826 aa12.11□□□□□ -0.47
LINC00544-202ENST00000481738 LOC102724428A0A0B4J2F2 783 aa12.1□□□□□ -0.47
LINC00544-202ENST00000481738 PTGER2P43116 358 aa12.1□□□□□ -0.47
LINC00544-202ENST00000481738 SIK1P57059 783 aa12.1□□□□□ -0.47
LINC00544-202ENST00000481738 MSH5O43196 834 aa12.09□□□□□ -0.47
LINC00544-202ENST00000481738 HMGB2P26583 209 aaKnown RBP12.09□□□□□ -0.47
LINC00544-202ENST00000481738 MTHFSDQ2M296 383 aaKnown RBP12.09□□□□□ -0.47
LINC00544-202ENST00000481738 AKAP4Q5JQC9 854 aa12.09□□□□□ -0.47
LINC00544-202ENST00000481738 SLC16A10Q8TF71 515 aa12.09□□□□□ -0.47
LINC00544-202ENST00000481738 C4BP0C0L5 1744 aa12.08□□□□□ -0.47
LINC00544-202ENST00000481738 SCN11AQ9UI33 1791 aa12.08□□□□□ -0.48
LINC00544-202ENST00000481738 ATP6V1AP38606 617 aa12.08□□□□□ -0.48
LINC00544-202ENST00000481738 ITPK1Q13572 414 aa12.08□□□□□ -0.48
LINC00544-202ENST00000481738 COL23A1Q86Y22 540 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms