RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 FAM181BA6NEQ2 426 aa7.58□□□□□ -1.2
CBX3-207ENST00000481300 ITGA6P23229 1130 aa7.58□□□□□ -1.2
CBX3-207ENST00000481300 ERVK-9P63128 1117 aa7.58□□□□□ -1.2
CBX3-207ENST00000481300 SCTRP47872 440 aa7.57□□□□□ -1.2
CBX3-207ENST00000481300 ATP5J2-PTCD1G3V325 749 aa7.56□□□□□ -1.2
CBX3-207ENST00000481300 MCCD1P59942 119 aaPredicted RBP7.56□□□□□ -1.2
CBX3-207ENST00000481300 RNF20Q5VTR2 975 aa7.56□□□□□ -1.2
CBX3-207ENST00000481300 CCDC125Q86Z20 511 aa7.56□□□□□ -1.2
CBX3-207ENST00000481300 CLUAP1Q96AJ1 413 aa7.56□□□□□ -1.2
CBX3-207ENST00000481300 RNF144AP50876 292 aaPredicted RBP7.55□□□□□ -1.2
CBX3-207ENST00000481300 RNFT1Q5M7Z0 435 aa7.55□□□□□ -1.2
CBX3-207ENST00000481300 CC2D2BQ6DHV5 1058 aa7.55□□□□□ -1.2
CBX3-207ENST00000481300 LYSMD3Q7Z3D4 306 aa7.55□□□□□ -1.2
CBX3-207ENST00000481300 VWA5B2Q8N398 1253 aa7.55□□□□□ -1.2
CBX3-207ENST00000481300 CNTNAP3BQ96NU0 1288 aa7.55□□□□□ -1.2
CBX3-207ENST00000481300 COL25A1Q9BXS0 654 aaPredicted RBP7.55□□□□□ -1.2
CBX3-207ENST00000481300 CNTNAP3Q9BZ76 1288 aa7.55□□□□□ -1.2
CBX3-207ENST00000481300 TBC1D2BQ9UPU7 963 aa7.55□□□□□ -1.2
CBX3-207ENST00000481300 A0A1W2PRU2 124 aa7.54□□□□□ -1.2
CBX3-207ENST00000481300 A6NJR5 290 aa7.54□□□□□ -1.2
CBX3-207ENST00000481300 PRICKLE2Q7Z3G6 844 aa7.54□□□□□ -1.2
CBX3-207ENST00000481300 TRIM52Q96A61 297 aa7.54□□□□□ -1.2
CBX3-207ENST00000481300 ZNF330Q9Y3S2 320 aaPredicted RBP7.54□□□□□ -1.2
CBX3-207ENST00000481300 PCDHB11Q9Y5F2 797 aa7.54□□□□□ -1.2
CBX3-207ENST00000481300 CDC14CA4D256 554 aa7.53□□□□□ -1.2
CBX3-207ENST00000481300 SUPT5HO00267 1087 aaKnown RBP7.53□□□□□ -1.2
CBX3-207ENST00000481300 TRAK2O60296 914 aa7.53□□□□□ -1.2
CBX3-207ENST00000481300 RHOQP17081 205 aa7.53□□□□□ -1.2
CBX3-207ENST00000481300 WWC1Q8IX03 1113 aa7.53□□□□□ -1.2
CBX3-207ENST00000481300 OSBPL3Q9H4L5 887 aa7.53□□□□□ -1.2
CBX3-207ENST00000481300 CUEDC1Q9NWM3 386 aaPredicted RBP7.53□□□□□ -1.2
CBX3-207ENST00000481300 MEN1O00255 615 aa7.52□□□□□ -1.21
CBX3-207ENST00000481300 IRF5Q13568 498 aa7.52□□□□□ -1.21
CBX3-207ENST00000481300 SV2AQ7L0J3 742 aa7.52□□□□□ -1.21
CBX3-207ENST00000481300 ZNF592Q92610 1267 aa7.52□□□□□ -1.21
CBX3-207ENST00000481300 POM121Q96HA1 1249 aa7.52□□□□□ -1.21
CBX3-207ENST00000481300 COG6Q9Y2V7 657 aa7.52□□□□□ -1.21
CBX3-207ENST00000481300 GPC1P35052 558 aa7.51□□□□□ -1.21
CBX3-207ENST00000481300 CYP2U1Q7Z449 544 aa7.51□□□□□ -1.21
CBX3-207ENST00000481300 PROSER2Q86WR7 435 aaPredicted RBP7.51□□□□□ -1.21
CBX3-207ENST00000481300 CCDC85AQ96PX6 553 aaPredicted RBP7.51□□□□□ -1.21
CBX3-207ENST00000481300 GDPD2Q9HCC8 539 aa7.51□□□□□ -1.21
CBX3-207ENST00000481300 CEP126Q9P2H0 1117 aa7.51□□□□□ -1.21
CBX3-207ENST00000481300 ABL2P42684 1182 aa7.5□□□□□ -1.21
CBX3-207ENST00000481300 CLN3Q13286 438 aa7.5□□□□□ -1.21
CBX3-207ENST00000481300 CDCA7Q9BWT1 371 aaPredicted RBP7.5□□□□□ -1.21
CBX3-207ENST00000481300 ARHGEF10LQ9HCE6 1279 aa7.5□□□□□ -1.21
CBX3-207ENST00000481300 GRIP2Q9C0E4 1043 aa7.49□□□□□ -1.21
CBX3-207ENST00000481300 POU4F2Q12837 409 aa7.48□□□□□ -1.21
CBX3-207ENST00000481300 TSGA10IPQ3SY00 556 aa7.48□□□□□ -1.21
CBX3-207ENST00000481300 NLRP3Q96P20 1036 aa7.48□□□□□ -1.21
CBX3-207ENST00000481300 RAB6BQ9NRW1 208 aa7.48□□□□□ -1.21
CBX3-207ENST00000481300 SLURP2P0DP57 97 aa7.47□□□□□ -1.21
CBX3-207ENST00000481300 GAS6Q14393 721 aa7.47□□□□□ -1.21
CBX3-207ENST00000481300 SLC27A3Q5K4L6 730 aa7.47□□□□□ -1.21
CBX3-207ENST00000481300 ZNF385CQ66K41 422 aaPredicted RBP7.47□□□□□ -1.21
CBX3-207ENST00000481300 PHTF2Q8N3S3 785 aa7.47□□□□□ -1.21
CBX3-207ENST00000481300 WHAMMQ8TF30 809 aa7.47□□□□□ -1.21
CBX3-207ENST00000481300 ZNF837Q96EG3 531 aaPredicted RBP7.47□□□□□ -1.21
CBX3-207ENST00000481300 IL2RAP01589 272 aa7.46□□□□□ -1.22
CBX3-207ENST00000481300 NBPF10Q6P3W6 841 aaKnown RBP7.46□□□□□ -1.22
CBX3-207ENST00000481300 NBPF15Q8N660 670 aa7.46□□□□□ -1.22
CBX3-207ENST00000481300 DYRK1BQ9Y463 629 aa7.46□□□□□ -1.22
CBX3-207ENST00000481300 SPATA31C2B4DYI2 1134 aa7.45□□□□□ -1.22
CBX3-207ENST00000481300 GNRH1P01148 92 aa7.45□□□□□ -1.22
CBX3-207ENST00000481300 GSK3AP49840 483 aa7.45□□□□□ -1.22
CBX3-207ENST00000481300 EIF4G2P78344 907 aaKnown RBP eCLIP7.45□□□□□ -1.22
CBX3-207ENST00000481300 VAC14Q08AM6 782 aa7.45□□□□□ -1.22
CBX3-207ENST00000481300 DBN1Q16643 649 aa7.45□□□□□ -1.22
CBX3-207ENST00000481300 TRIM22Q8IYM9 498 aa7.45□□□□□ -1.22
CBX3-207ENST00000481300 ESF1Q9H501 851 aaKnown RBP7.45□□□□□ -1.22
CBX3-207ENST00000481300 HRH3Q9Y5N1 445 aa7.45□□□□□ -1.22
CBX3-207ENST00000481300 FNBP4Q8N3X1 1017 aaPredicted RBP7.44□□□□□ -1.22
CBX3-207ENST00000481300 CNKSR1Q969H4 720 aa7.44□□□□□ -1.22
CBX3-207ENST00000481300 ESYT1Q9BSJ8 1104 aa7.44□□□□□ -1.22
CBX3-207ENST00000481300 ADAMTS8Q9UP79 889 aa7.44□□□□□ -1.22
CBX3-207ENST00000481300 ARID3CA6NKF2 412 aa7.43□□□□□ -1.22
CBX3-207ENST00000481300 GPR25O00155 361 aa7.43□□□□□ -1.22
CBX3-207ENST00000481300 ARHGEF15O94989 841 aa7.43□□□□□ -1.22
CBX3-207ENST00000481300 ADAMTS2O95450 1211 aa7.43□□□□□ -1.22
CBX3-207ENST00000481300 MYCP01106 439 aaPredicted RBP7.43□□□□□ -1.22
CBX3-207ENST00000481300 CENPCQ03188 943 aa7.43□□□□□ -1.22
CBX3-207ENST00000481300 WASHC4Q2M389 1173 aa7.43□□□□□ -1.22
CBX3-207ENST00000481300 RIPOR1Q6ZS17 1223 aa7.43□□□□□ -1.22
CBX3-207ENST00000481300 SVOPQ8N4V2 548 aa7.43□□□□□ -1.22
CBX3-207ENST00000481300 GMCL1Q96IK5 515 aa7.43□□□□□ -1.22
CBX3-207ENST00000481300 GAS2L1Q99501 681 aaPredicted RBP7.43□□□□□ -1.22
CBX3-207ENST00000481300 CHIC2Q9UKJ5 165 aa7.43□□□□□ -1.22
CBX3-207ENST00000481300 ZNF777Q9ULD5 760 aaPredicted RBP7.43□□□□□ -1.22
CBX3-207ENST00000481300 DOLKQ9UPQ8 538 aa7.43□□□□□ -1.22
CBX3-207ENST00000481300 WASLO00401 505 aaPredicted RBP7.42□□□□□ -1.22
CBX3-207ENST00000481300 STAU1O95793 577 aaKnown RBP7.42□□□□□ -1.22
CBX3-207ENST00000481300 SRSF11Q05519 484 aaKnown RBP7.42□□□□□ -1.22
CBX3-207ENST00000481300 WDR44Q5JSH3 913 aa7.42□□□□□ -1.22
CBX3-207ENST00000481300 TAS1R3Q7RTX0 852 aa7.42□□□□□ -1.22
CBX3-207ENST00000481300 RNF135Q8IUD6 432 aa7.42□□□□□ -1.22
CBX3-207ENST00000481300 XAGE2Q96GT9 111 aa7.42□□□□□ -1.22
CBX3-207ENST00000481300 FHDC1Q9C0D6 1143 aaPredicted RBP7.42□□□□□ -1.22
CBX3-207ENST00000481300 KCNMA1Q12791 1236 aa7.41□□□□□ -1.22
CBX3-207ENST00000481300 SLFNL1Q499Z3 407 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms