RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 RPAP2Q8IXW5 612 aaPredicted RBP23.63■■□□□ 1.37
CCM2-214ENST00000481194 ROBO2Q9HCK4 1378 aa23.63■■□□□ 1.37
CCM2-214ENST00000481194 MPRIPQ6WCQ1 1025 aa23.63■■□□□ 1.37
CCM2-214ENST00000481194 HYPKQ9NX55 129 aa23.63■■□□□ 1.37
CCM2-214ENST00000481194 INTS3Q68E01 1043 aaKnown RBP23.62■■□□□ 1.37
CCM2-214ENST00000481194 PHF23Q9BUL5 403 aaPredicted RBP23.62■■□□□ 1.37
CCM2-214ENST00000481194 SOS1Q07889 1333 aaPredicted RBP23.62■■□□□ 1.37
CCM2-214ENST00000481194 CLASRPQ8N2M8 674 aaKnown RBP23.61■■□□□ 1.37
CCM2-214ENST00000481194 ZRSR1Q15695 479 aaKnown RBP23.61■■□□□ 1.37
CCM2-214ENST00000481194 SSH1Q8WYL5 1049 aa23.61■■□□□ 1.37
CCM2-214ENST00000481194 CHRNA2Q15822 529 aa23.61■■□□□ 1.37
CCM2-214ENST00000481194 DBF4Q9UBU7 674 aaPredicted RBP23.6■■□□□ 1.37
CCM2-214ENST00000481194 MBIPQ9NS73 344 aa23.6■■□□□ 1.37
CCM2-214ENST00000481194 LARP1Q6PKG0 1096 aaKnown RBP23.6■■□□□ 1.37
CCM2-214ENST00000481194 AATKQ6ZMQ8 1374 aa23.59■■□□□ 1.37
CCM2-214ENST00000481194 ZCRB1Q8TBF4 217 aaKnown RBP23.59■■□□□ 1.37
CCM2-214ENST00000481194 LNPKQ9C0E8 428 aa23.59■■□□□ 1.37
CCM2-214ENST00000481194 DEPDC5O75140 1603 aa23.59■■□□□ 1.37
CCM2-214ENST00000481194 MAP3K5Q99683 1374 aa23.59■■□□□ 1.37
CCM2-214ENST00000481194 MYL6BP14649 208 aa23.59■■□□□ 1.37
CCM2-214ENST00000481194 NEURL4Q96JN8 1562 aa23.58■■□□□ 1.37
CCM2-214ENST00000481194 SURF6O75683 361 aaKnown RBP23.58■■□□□ 1.37
CCM2-214ENST00000481194 ORAI2Q96SN7 254 aa23.58■■□□□ 1.37
CCM2-214ENST00000481194 RSPH6AQ9H0K4 717 aa23.58■■□□□ 1.37
CCM2-214ENST00000481194 TSHZ2Q9NRE2 1034 aa23.58■■□□□ 1.37
CCM2-214ENST00000481194 TMEM94Q12767 1356 aa23.58■■□□□ 1.37
CCM2-214ENST00000481194 IL13P35225 146 aa23.57■■□□□ 1.36
CCM2-214ENST00000481194 SF3B2Q13435 895 aaKnown RBP23.57■■□□□ 1.36
CCM2-214ENST00000481194 SLAIN2Q9P270 581 aa23.57■■□□□ 1.36
CCM2-214ENST00000481194 FBLN1P23142 703 aa23.57■■□□□ 1.36
CCM2-214ENST00000481194 MIS18AQ9NYP9 233 aa23.57■■□□□ 1.36
CCM2-214ENST00000481194 ARHGAP45Q92619 1136 aa23.57■■□□□ 1.36
CCM2-214ENST00000481194 BABAM1Q9NWV8 329 aa23.57■■□□□ 1.36
CCM2-214ENST00000481194 CDC45O75419 566 aa23.56■■□□□ 1.36
CCM2-214ENST00000481194 IPO9Q96P70 1041 aaKnown RBP23.56■■□□□ 1.36
CCM2-214ENST00000481194 NOL10Q9BSC4 688 aaKnown RBP23.56■■□□□ 1.36
CCM2-214ENST00000481194 CDCA7Q9BWT1 371 aaPredicted RBP23.56■■□□□ 1.36
CCM2-214ENST00000481194 VWDEQ8N2E2 1590 aa23.56■■□□□ 1.36
CCM2-214ENST00000481194 HSP90AB3PQ58FF7 597 aa23.56■■□□□ 1.36
CCM2-214ENST00000481194 VPS37DQ86XT2 251 aa23.56■■□□□ 1.36
CCM2-214ENST00000481194 EYA1Q99502 592 aa23.56■■□□□ 1.36
CCM2-214ENST00000481194 IL2RBP14784 551 aa23.55■■□□□ 1.36
CCM2-214ENST00000481194 TMEM57Q8N5G2 664 aa23.55■■□□□ 1.36
CCM2-214ENST00000481194 ZNF652Q9Y2D9 606 aa23.55■■□□□ 1.36
CCM2-214ENST00000481194 BLMP54132 1417 aaPredicted RBP23.54■■□□□ 1.36
CCM2-214ENST00000481194 GBP4Q96PP9 640 aa23.54■■□□□ 1.36
CCM2-214ENST00000481194 HIP1O00291 1037 aa23.54■■□□□ 1.36
CCM2-214ENST00000481194 CNTROBQ8N137 903 aa23.54■■□□□ 1.36
CCM2-214ENST00000481194 PDZRN3Q9UPQ7 1066 aa23.54■■□□□ 1.36
CCM2-214ENST00000481194 KIF3AQ9Y496 699 aa23.54■■□□□ 1.36
CCM2-214ENST00000481194 DLC1Q96QB1 1528 aa23.54■■□□□ 1.36
CCM2-214ENST00000481194 PREX1Q8TCU6 1659 aa23.53■■□□□ 1.36
CCM2-214ENST00000481194 RNF20Q5VTR2 975 aa23.53■■□□□ 1.36
CCM2-214ENST00000481194 KIAA1210Q9ULL0 1709 aa23.53■■□□□ 1.36
CCM2-214ENST00000481194 AEBP1Q8IUX7 1158 aa23.52■■□□□ 1.36
CCM2-214ENST00000481194 LRRCC1Q9C099 1032 aa23.52■■□□□ 1.36
CCM2-214ENST00000481194 USP6P35125 1406 aa23.52■■□□□ 1.36
CCM2-214ENST00000481194 NEXMIFQ5QGS0 1516 aa23.52■■□□□ 1.36
CCM2-214ENST00000481194 SNRPA1P09661 255 aaKnown RBP23.52■■□□□ 1.36
CCM2-214ENST00000481194 ZKSCAN1P17029 563 aaPredicted RBP23.52■■□□□ 1.36
CCM2-214ENST00000481194 REREQ9P2R6 1566 aa23.52■■□□□ 1.36
CCM2-214ENST00000481194 MTHFSDQ2M296 383 aaKnown RBP23.52■■□□□ 1.35
CCM2-214ENST00000481194 RTL1A6NKG5 1358 aa23.51■■□□□ 1.35
CCM2-214ENST00000481194 KIF24Q5T7B8 1368 aa23.51■■□□□ 1.35
CCM2-214ENST00000481194 AMOTL1Q8IY63 956 aa23.51■■□□□ 1.35
CCM2-214ENST00000481194 PCDH11XQ9BZA7 1347 aa23.51■■□□□ 1.35
CCM2-214ENST00000481194 PCDH11YQ9BZA8 1340 aa23.51■■□□□ 1.35
CCM2-214ENST00000481194 GOLGA6L4A6NEF3 574 aa23.51■■□□□ 1.35
CCM2-214ENST00000481194 FAM83GA6ND36 823 aa23.5■■□□□ 1.35
CCM2-214ENST00000481194 C1orf115Q9H7X2 142 aa23.5■■□□□ 1.35
CCM2-214ENST00000481194 DNAAF4Q8WXU2 420 aa23.49■■□□□ 1.35
CCM2-214ENST00000481194 SPATA31D1Q6ZQQ2 1576 aa23.49■■□□□ 1.35
CCM2-214ENST00000481194 PIK3C2BO00750 1634 aa23.49■■□□□ 1.35
CCM2-214ENST00000481194 NEUROD6Q96NK8 337 aa23.49■■□□□ 1.35
CCM2-214ENST00000481194 QRICH2Q9H0J4 1663 aa23.48■■□□□ 1.35
CCM2-214ENST00000481194 DCAF5Q96JK2 942 aa23.48■■□□□ 1.35
CCM2-214ENST00000481194 FLIIQ13045 1269 aa23.48■■□□□ 1.35
CCM2-214ENST00000481194 GNL2Q13823 731 aaKnown RBP23.48■■□□□ 1.35
CCM2-214ENST00000481194 FRMPD1Q5SYB0 1578 aa23.47■■□□□ 1.35
CCM2-214ENST00000481194 CABLES1Q8TDN4 633 aa23.47■■□□□ 1.35
CCM2-214ENST00000481194 RAB11FIP3O75154 756 aa23.47■■□□□ 1.35
CCM2-214ENST00000481194 PTCD1O75127 700 aaKnown RBP23.46■■□□□ 1.35
CCM2-214ENST00000481194 CCDC57Q2TAC2 916 aa23.46■■□□□ 1.35
CCM2-214ENST00000481194 PTCH1Q13635 1447 aa23.46■■□□□ 1.35
CCM2-214ENST00000481194 SMARCC1Q92922 1105 aaPredicted RBP23.46■■□□□ 1.35
CCM2-214ENST00000481194 RICTORQ6R327 1708 aa23.45■■□□□ 1.34
CCM2-214ENST00000481194 ADGRL3Q9HAR2 1447 aa23.45■■□□□ 1.34
CCM2-214ENST00000481194 A0A087WZG4 1122 aa23.44■■□□□ 1.34
CCM2-214ENST00000481194 CHD1LQ86WJ1 897 aa23.44■■□□□ 1.34
CCM2-214ENST00000481194 CNNM1Q9NRU3 951 aa23.44■■□□□ 1.34
CCM2-214ENST00000481194 TRIM27P14373 513 aa23.44■■□□□ 1.34
CCM2-214ENST00000481194 SRGAP3O43295 1099 aa23.44■■□□□ 1.34
CCM2-214ENST00000481194 TULP4Q9NRJ4 1543 aa23.44■■□□□ 1.34
CCM2-214ENST00000481194 CSPP1Q1MSJ5 1256 aa23.43■■□□□ 1.34
CCM2-214ENST00000481194 CCDC158Q5M9N0 1113 aa23.43■■□□□ 1.34
CCM2-214ENST00000481194 GNL3LQ9NVN8 582 aaKnown RBP23.43■■□□□ 1.34
CCM2-214ENST00000481194 CDC42BPGQ6DT37 1551 aa23.43■■□□□ 1.34
CCM2-214ENST00000481194 NRXN1Q9ULB1 1477 aa23.42■■□□□ 1.34
CCM2-214ENST00000481194 TBC1D2BQ9UPU7 963 aa23.42■■□□□ 1.34
CCM2-214ENST00000481194 DDB1Q16531 1140 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 272.9 ms