RNA–Protein interactions for RNA: ENST00000481163.1

PRDM1-206, Transcript of PR/SET domain 1, humanhuman

TSL 3

Gene PRDM1, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-206ENST00000481163 PER1O15534 1290 aaPredicted RBP9.09□□□□□ -0.95
PRDM1-206ENST00000481163 AMER1Q5JTC6 1135 aaPredicted RBP9.09□□□□□ -0.95
PRDM1-206ENST00000481163 SYTL4Q96C24 671 aaPredicted RBP9.09□□□□□ -0.95
PRDM1-206ENST00000481163 DISP2A7MBM2 1401 aa9.08□□□□□ -0.96
PRDM1-206ENST00000481163 KCNQ2O43526 872 aa9.08□□□□□ -0.96
PRDM1-206ENST00000481163 MAPK8IP2Q13387 824 aaPredicted RBP9.08□□□□□ -0.96
PRDM1-206ENST00000481163 EIF4A2Q14240 407 aaKnown RBP9.08□□□□□ -0.96
PRDM1-206ENST00000481163 ZCRB1Q8TBF4 217 aaKnown RBP9.08□□□□□ -0.96
PRDM1-206ENST00000481163 NSD2O96028 1365 aa9.08□□□□□ -0.96
PRDM1-206ENST00000481163 PSDA5PKW4 1024 aaPredicted RBP9.07□□□□□ -0.96
PRDM1-206ENST00000481163 ZEB1P37275 1124 aaPredicted RBP9.07□□□□□ -0.96
PRDM1-206ENST00000481163 MTHFSP49914 203 aa9.07□□□□□ -0.96
PRDM1-206ENST00000481163 DDX10Q13206 875 aaKnown RBP9.07□□□□□ -0.96
PRDM1-206ENST00000481163 EYA1Q99502 592 aa9.07□□□□□ -0.96
PRDM1-206ENST00000481163 TNS2Q63HR2 1409 aa9.06□□□□□ -0.96
PRDM1-206ENST00000481163 MEGF6O75095 1541 aa9.06□□□□□ -0.96
PRDM1-206ENST00000481163 SHANK3Q9BYB0 1731 aa9.05□□□□□ -0.96
PRDM1-206ENST00000481163 KIF24Q5T7B8 1368 aa9.05□□□□□ -0.96
PRDM1-206ENST00000481163 BCL11BQ9C0K0 894 aaPredicted RBP9.05□□□□□ -0.96
PRDM1-206ENST00000481163 BTAF1O14981 1849 aa9.05□□□□□ -0.96
PRDM1-206ENST00000481163 DOT1LQ8TEK3 1739 aa9.05□□□□□ -0.96
PRDM1-206ENST00000481163 U2SURPO15042 1029 aaKnown RBP9.04□□□□□ -0.96
PRDM1-206ENST00000481163 HMOX1P09601 288 aa9.04□□□□□ -0.96
PRDM1-206ENST00000481163 PRIM1P49642 420 aaKnown RBP9.04□□□□□ -0.96
PRDM1-206ENST00000481163 CAMKK2Q96RR4 588 aa9.04□□□□□ -0.96
PRDM1-206ENST00000481163 ITGB4P16144 1822 aa9.03□□□□□ -0.96
PRDM1-206ENST00000481163 R3HDM1Q15032 1099 aaKnown RBP9.03□□□□□ -0.96
PRDM1-206ENST00000481163 SULT6B1Q6IMI4 303 aa9.03□□□□□ -0.96
PRDM1-206ENST00000481163 AEBP1Q8IUX7 1158 aa9.03□□□□□ -0.96
PRDM1-206ENST00000481163 SPG7Q9UQ90 795 aa9.03□□□□□ -0.96
PRDM1-206ENST00000481163 NHSQ6T4R5 1651 aa9.02□□□□□ -0.97
PRDM1-206ENST00000481163 DIAPH1O60610 1272 aaKnown RBP9.02□□□□□ -0.97
PRDM1-206ENST00000481163 KCNQ4P56696 695 aa9.02□□□□□ -0.97
PRDM1-206ENST00000481163 MPRIPQ6WCQ1 1025 aa9.02□□□□□ -0.97
PRDM1-206ENST00000481163 VIRMAQ69YN4 1812 aaKnown RBP9.02□□□□□ -0.97
PRDM1-206ENST00000481163 PCDH11XQ9BZA7 1347 aa9.02□□□□□ -0.97
PRDM1-206ENST00000481163 PCDH11YQ9BZA8 1340 aa9.02□□□□□ -0.97
PRDM1-206ENST00000481163 CYP27B1O15528 508 aa9.01□□□□□ -0.97
PRDM1-206ENST00000481163 IL13P35225 146 aa9.01□□□□□ -0.97
PRDM1-206ENST00000481163 PLEKHO1Q53GL0 409 aaPredicted RBP9.01□□□□□ -0.97
PRDM1-206ENST00000481163 NUP188Q5SRE5 1749 aa9.01□□□□□ -0.97
PRDM1-206ENST00000481163 NBPF14Q5TI25 921 aa9.01□□□□□ -0.97
PRDM1-206ENST00000481163 PKD1L3Q7Z443 1732 aa9□□□□□ -0.97
PRDM1-206ENST00000481163 PLSCR1O15162 318 aa9□□□□□ -0.97
PRDM1-206ENST00000481163 PPP2R1AP30153 589 aa9□□□□□ -0.97
PRDM1-206ENST00000481163 TXNRD1Q16881 649 aa9□□□□□ -0.97
PRDM1-206ENST00000481163 ZNF530Q6P9A1 599 aaPredicted RBP9□□□□□ -0.97
PRDM1-206ENST00000481163 PPP4R3CPQ6ZMV5 832 aa9□□□□□ -0.97
PRDM1-206ENST00000481163 CFAP53Q96M91 514 aa9□□□□□ -0.97
PRDM1-206ENST00000481163 RREB1Q92766 1687 aa9□□□□□ -0.97
PRDM1-206ENST00000481163 IGSF1Q8N6C5 1336 aa9□□□□□ -0.97
PRDM1-206ENST00000481163 C1orf141Q5JVX7 400 aa8.99□□□□□ -0.97
PRDM1-206ENST00000481163 IFNL2Q8IZJ0 200 aa8.99□□□□□ -0.97
PRDM1-206ENST00000481163 PROM2Q8N271 834 aa8.99□□□□□ -0.97
PRDM1-206ENST00000481163 SP7Q8TDD2 431 aaPredicted RBP8.99□□□□□ -0.97
PRDM1-206ENST00000481163 NPC1L1Q9UHC9 1359 aa8.99□□□□□ -0.97
PRDM1-206ENST00000481163 TOGARAM1Q9Y4F4 1720 aa8.98□□□□□ -0.97
PRDM1-206ENST00000481163 PHKG2P15735 406 aa8.98□□□□□ -0.97
PRDM1-206ENST00000481163 STK32BQ9NY57 414 aa8.97□□□□□ -0.97
PRDM1-206ENST00000481163 TMOD3Q9NYL9 352 aa8.97□□□□□ -0.97
PRDM1-206ENST00000481163 BCL9O00512 1426 aa8.97□□□□□ -0.97
PRDM1-206ENST00000481163 ZNF316A6NFI3 1004 aaPredicted RBP8.96□□□□□ -0.98
PRDM1-206ENST00000481163 U2AF1L5P0DN76 240 aaPredicted RBP8.96□□□□□ -0.98
PRDM1-206ENST00000481163 U2AF1Q01081 240 aaKnown RBP eCLIP8.96□□□□□ -0.98
PRDM1-206ENST00000481163 AMOTQ4VCS5 1084 aa8.96□□□□□ -0.98
PRDM1-206ENST00000481163 PIGBQ92521 554 aa8.96□□□□□ -0.98
PRDM1-206ENST00000481163 RBM42Q9BTD8 480 aaKnown RBP8.96□□□□□ -0.98
PRDM1-206ENST00000481163 ANO8Q9HCE9 1232 aaPredicted RBP8.96□□□□□ -0.98
PRDM1-206ENST00000481163 LRRC4BQ9NT99 713 aa8.96□□□□□ -0.98
PRDM1-206ENST00000481163 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.96□□□□□ -0.98
PRDM1-206ENST00000481163 CCNL1Q9UK58 526 aaPredicted RBP8.96□□□□□ -0.98
PRDM1-206ENST00000481163 NUDCQ9Y266 331 aa8.96□□□□□ -0.98
PRDM1-206ENST00000481163 PARD3Q8TEW0 1356 aa8.96□□□□□ -0.98
PRDM1-206ENST00000481163 RGPD3A6NKT7 1758 aaPredicted RBP8.96□□□□□ -0.98
PRDM1-206ENST00000481163 RGPD4Q7Z3J3 1758 aa8.96□□□□□ -0.98
PRDM1-206ENST00000481163 NCAPD2Q15021 1401 aa8.96□□□□□ -0.98
PRDM1-206ENST00000481163 CABP4P57796 275 aa8.95□□□□□ -0.98
PRDM1-206ENST00000481163 MTHFSDQ2M296 383 aaKnown RBP8.95□□□□□ -0.98
PRDM1-206ENST00000481163 PDGFDQ9GZP0 370 aaPredicted RBP8.95□□□□□ -0.98
PRDM1-206ENST00000481163 LGR6Q9HBX8 967 aa8.95□□□□□ -0.98
PRDM1-206ENST00000481163 ASAP1Q9ULH1 1129 aa8.95□□□□□ -0.98
PRDM1-206ENST00000481163 LY75O60449 1722 aa8.94□□□□□ -0.98
PRDM1-206ENST00000481163 SCN11AQ9UI33 1791 aa8.94□□□□□ -0.98
PRDM1-206ENST00000481163 HSP90AB1P08238 724 aaKnown RBP8.94□□□□□ -0.98
PRDM1-206ENST00000481163 PRKAR2BP31323 418 aa8.94□□□□□ -0.98
PRDM1-206ENST00000481163 NKX1-1Q15270 411 aaPredicted RBP8.94□□□□□ -0.98
PRDM1-206ENST00000481163 SLC15A2Q16348 729 aa8.94□□□□□ -0.98
PRDM1-206ENST00000481163 NCBP3Q53F19 620 aaKnown RBP8.94□□□□□ -0.98
PRDM1-206ENST00000481163 NFATC2IPQ8NCF5 419 aa8.94□□□□□ -0.98
PRDM1-206ENST00000481163 DCAF5Q96JK2 942 aa8.94□□□□□ -0.98
PRDM1-206ENST00000481163 COL3A1P02461 1466 aaPredicted RBP8.94□□□□□ -0.98
PRDM1-206ENST00000481163 TAF1LQ8IZX4 1826 aa8.94□□□□□ -0.98
PRDM1-206ENST00000481163 ZBTB7AO95365 584 aa8.93□□□□□ -0.98
PRDM1-206ENST00000481163 RALBP1Q15311 655 aa8.93□□□□□ -0.98
PRDM1-206ENST00000481163 ZNF827Q17R98 1081 aa8.93□□□□□ -0.98
PRDM1-206ENST00000481163 AKAP4Q5JQC9 854 aa8.93□□□□□ -0.98
PRDM1-206ENST00000481163 SMARCC1Q92922 1105 aaPredicted RBP8.93□□□□□ -0.98
PRDM1-206ENST00000481163 TFCP2L1Q9NZI6 479 aa8.93□□□□□ -0.98
PRDM1-206ENST00000481163 ATF5Q9Y2D1 282 aaPredicted RBP8.93□□□□□ -0.98
PRDM1-206ENST00000481163 TUBGCP6Q96RT7 1819 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms