RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 RNF123Q5XPI4 1314 aa19.24■□□□□ 0.67
SNRNP200-205ENST00000480835 PARP4Q9UKK3 1724 aaKnown RBP19.23■□□□□ 0.67
SNRNP200-205ENST00000480835 LRRC37A3O60309 1634 aa19.23■□□□□ 0.67
SNRNP200-205ENST00000480835 CT47B1P0C2W7 299 aaPredicted RBP19.23■□□□□ 0.67
SNRNP200-205ENST00000480835 EVA1CP58658 441 aa19.23■□□□□ 0.67
SNRNP200-205ENST00000480835 CARD10Q9BWT7 1032 aa19.23■□□□□ 0.67
SNRNP200-205ENST00000480835 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.23■□□□□ 0.67
SNRNP200-205ENST00000480835 PLCH1Q4KWH8 1693 aa19.23■□□□□ 0.67
SNRNP200-205ENST00000480835 ZNF853P0CG23 659 aa19.22■□□□□ 0.67
SNRNP200-205ENST00000480835 TOM1L2Q6ZVM7 507 aa19.22■□□□□ 0.67
SNRNP200-205ENST00000480835 PKD1L3Q7Z443 1732 aa19.22■□□□□ 0.67
SNRNP200-205ENST00000480835 NWD2Q9ULI1 1742 aa19.22■□□□□ 0.67
SNRNP200-205ENST00000480835 FANCIQ9NVI1 1328 aa19.22■□□□□ 0.67
SNRNP200-205ENST00000480835 AKAP4Q5JQC9 854 aa19.21■□□□□ 0.67
SNRNP200-205ENST00000480835 CFAP44Q96MT7 982 aa19.21■□□□□ 0.67
SNRNP200-205ENST00000480835 VIRMAQ69YN4 1812 aaKnown RBP19.21■□□□□ 0.67
SNRNP200-205ENST00000480835 CRB1P82279 1406 aa19.2■□□□□ 0.66
SNRNP200-205ENST00000480835 ZNF530Q6P9A1 599 aaPredicted RBP19.2■□□□□ 0.66
SNRNP200-205ENST00000480835 THUMPD2Q9BTF0 503 aaKnown RBP19.2■□□□□ 0.66
SNRNP200-205ENST00000480835 BTG4Q9NY30 223 aa19.2■□□□□ 0.66
SNRNP200-205ENST00000480835 SPG7Q9UQ90 795 aa19.2■□□□□ 0.66
SNRNP200-205ENST00000480835 SPATA31A6Q5VVP1 1343 aa19.2■□□□□ 0.66
SNRNP200-205ENST00000480835 C1orf141Q5JVX7 400 aa19.19■□□□□ 0.66
SNRNP200-205ENST00000480835 STRN4Q9NRL3 753 aa19.19■□□□□ 0.66
SNRNP200-205ENST00000480835 NRAPQ86VF7 1730 aa19.19■□□□□ 0.66
SNRNP200-205ENST00000480835 MEGF6O75095 1541 aa19.19■□□□□ 0.66
SNRNP200-205ENST00000480835 OVOS2A0A0G2JMS6 1433 aa19.18■□□□□ 0.66
SNRNP200-205ENST00000480835 DCTN1Q14203 1278 aa19.18■□□□□ 0.66
SNRNP200-205ENST00000480835 MCM10Q7L590 875 aa19.18■□□□□ 0.66
SNRNP200-205ENST00000480835 TSR2Q969E8 191 aaKnown RBP19.18■□□□□ 0.66
SNRNP200-205ENST00000480835 LARP1Q6PKG0 1096 aaKnown RBP19.17■□□□□ 0.66
SNRNP200-205ENST00000480835 LAS1LQ9Y4W2 734 aaKnown RBP19.17■□□□□ 0.66
SNRNP200-205ENST00000480835 NUTM2BA6NNL0 878 aaPredicted RBP19.16■□□□□ 0.66
SNRNP200-205ENST00000480835 NUTM2EB1AL46 878 aaPredicted RBP19.16■□□□□ 0.66
SNRNP200-205ENST00000480835 CHL1O00533 1208 aa19.16■□□□□ 0.66
SNRNP200-205ENST00000480835 ADAMTS2O95450 1211 aa19.16■□□□□ 0.66
SNRNP200-205ENST00000480835 NUTM2AQ8IVF1 878 aaPredicted RBP19.16■□□□□ 0.66
SNRNP200-205ENST00000480835 BABAM1Q9NWV8 329 aa19.16■□□□□ 0.66
SNRNP200-205ENST00000480835 ADAMTS7Q9UKP4 1686 aa19.16■□□□□ 0.66
SNRNP200-205ENST00000480835 CEMIPQ8WUJ3 1361 aa19.16■□□□□ 0.66
SNRNP200-205ENST00000480835 MBIPQ9NS73 344 aa19.15■□□□□ 0.66
SNRNP200-205ENST00000480835 IL2RBP14784 551 aa19.14■□□□□ 0.65
SNRNP200-205ENST00000480835 RRP1P56182 461 aaKnown RBP19.14■□□□□ 0.65
SNRNP200-205ENST00000480835 EXOSC9Q06265 439 aaKnown RBP19.14■□□□□ 0.65
SNRNP200-205ENST00000480835 IL17REQ8NFR9 667 aa19.14■□□□□ 0.65
SNRNP200-205ENST00000480835 ZNF428Q96B54 188 aa19.14■□□□□ 0.65
SNRNP200-205ENST00000480835 SLIT2O94813 1529 aa19.14■□□□□ 0.65
SNRNP200-205ENST00000480835 SCN11AQ9UI33 1791 aa19.14■□□□□ 0.65
SNRNP200-205ENST00000480835 ERICH6BQ5W0A0 696 aa19.13■□□□□ 0.65
SNRNP200-205ENST00000480835 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.13■□□□□ 0.65
SNRNP200-205ENST00000480835 WNK3Q9BYP7 1800 aa19.13■□□□□ 0.65
SNRNP200-205ENST00000480835 HSP90AB1P08238 724 aaKnown RBP19.12■□□□□ 0.65
SNRNP200-205ENST00000480835 HSPA1LP34931 641 aa19.12■□□□□ 0.65
SNRNP200-205ENST00000480835 FKBP8Q14318 412 aa19.12■□□□□ 0.65
SNRNP200-205ENST00000480835 IFNL2Q8IZJ0 200 aa19.12■□□□□ 0.65
SNRNP200-205ENST00000480835 RNMTO43148 476 aaKnown RBP19.11■□□□□ 0.65
SNRNP200-205ENST00000480835 TAF7Q15545 349 aaPredicted RBP19.11■□□□□ 0.65
SNRNP200-205ENST00000480835 PHKG2P15735 406 aa19.1■□□□□ 0.65
SNRNP200-205ENST00000480835 RARSP54136 660 aaKnown RBP19.1■□□□□ 0.65
SNRNP200-205ENST00000480835 ZCRB1Q8TBF4 217 aaKnown RBP19.1■□□□□ 0.65
SNRNP200-205ENST00000480835 TSPYL4Q9UJ04 414 aa19.1■□□□□ 0.65
SNRNP200-205ENST00000480835 SIPA1L3O60292 1781 aaPredicted RBP19.09■□□□□ 0.65
SNRNP200-205ENST00000480835 SHANK3Q9BYB0 1731 aa19.09■□□□□ 0.65
SNRNP200-205ENST00000480835 PCDH11XQ9BZA7 1347 aa19.09■□□□□ 0.65
SNRNP200-205ENST00000480835 PCDH11YQ9BZA8 1340 aa19.09■□□□□ 0.65
SNRNP200-205ENST00000480835 THRAP3Q9Y2W1 955 aaKnown RBP19.09■□□□□ 0.65
SNRNP200-205ENST00000480835 DISP2A7MBM2 1401 aa19.08■□□□□ 0.65
SNRNP200-205ENST00000480835 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.08■□□□□ 0.65
SNRNP200-205ENST00000480835 TEFQ10587 303 aa19.08■□□□□ 0.64
SNRNP200-205ENST00000480835 CDCA7Q9BWT1 371 aaPredicted RBP19.08■□□□□ 0.64
SNRNP200-205ENST00000480835 LGR6Q9HBX8 967 aa19.08■□□□□ 0.64
SNRNP200-205ENST00000480835 KDM3BQ7LBC6 1761 aa19.08■□□□□ 0.64
SNRNP200-205ENST00000480835 ALDH1L2Q3SY69 923 aa19.07■□□□□ 0.64
SNRNP200-205ENST00000480835 MPRIPQ6WCQ1 1025 aa19.07■□□□□ 0.64
SNRNP200-205ENST00000480835 LRP6O75581 1613 aa19.07■□□□□ 0.64
SNRNP200-205ENST00000480835 SOS1Q07889 1333 aaPredicted RBP19.06■□□□□ 0.64
SNRNP200-205ENST00000480835 CYP27B1O15528 508 aa19.06■□□□□ 0.64
SNRNP200-205ENST00000480835 DCAF5Q96JK2 942 aa19.06■□□□□ 0.64
SNRNP200-205ENST00000480835 SPATA31A1Q5TZJ5 1347 aa19.05■□□□□ 0.64
SNRNP200-205ENST00000480835 MRC1P22897 1456 aa19.05■□□□□ 0.64
SNRNP200-205ENST00000480835 VAMP4O75379 141 aa19.05■□□□□ 0.64
SNRNP200-205ENST00000480835 TWISTNBQ3B726 338 aaPredicted RBP19.05■□□□□ 0.64
SNRNP200-205ENST00000480835 UNC5CLQ8IV45 518 aa19.05■□□□□ 0.64
SNRNP200-205ENST00000480835 FNBP4Q8N3X1 1017 aaPredicted RBP19.05■□□□□ 0.64
SNRNP200-205ENST00000480835 NGLY1Q96IV0 654 aa19.05■□□□□ 0.64
SNRNP200-205ENST00000480835 KDM6AO15550 1401 aaPredicted RBP19.05■□□□□ 0.64
SNRNP200-205ENST00000480835 SPATA31A5Q5VU36 1347 aa19.04■□□□□ 0.64
SNRNP200-205ENST00000480835 SPATA31A7Q8IWB4 1347 aa19.04■□□□□ 0.64
SNRNP200-205ENST00000480835 BCAR3O75815 825 aa19.04■□□□□ 0.64
SNRNP200-205ENST00000480835 C8orf37Q96NL8 207 aa19.04■□□□□ 0.64
SNRNP200-205ENST00000480835 USP35Q9P2H5 1018 aa19.04■□□□□ 0.64
SNRNP200-205ENST00000480835 IRX6P78412 446 aaPredicted RBP19.03■□□□□ 0.64
SNRNP200-205ENST00000480835 NKX1-1Q15270 411 aaPredicted RBP19.03■□□□□ 0.64
SNRNP200-205ENST00000480835 C8orf58Q8NAV2 365 aa19.03■□□□□ 0.64
SNRNP200-205ENST00000480835 BRPF1P55201 1214 aaPredicted RBP19.02■□□□□ 0.64
SNRNP200-205ENST00000480835 TSPYL6Q8N831 410 aa19.02■□□□□ 0.64
SNRNP200-205ENST00000480835 CACNA1FO60840 1977 aa19.02■□□□□ 0.64
SNRNP200-205ENST00000480835 BCL9LQ86UU0 1499 aa19.02■□□□□ 0.63
SNRNP200-205ENST00000480835 BTBD11A6QL63 1104 aa19.01■□□□□ 0.63
SNRNP200-205ENST00000480835 VPS72Q15906 364 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms