RNA–Protein interactions for RNA: ENST00000480807.1

SNX8-208, Transcript of sorting nexin 8, humanhuman

TSL 2

Gene SNX8, Length 534 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX8-208ENST00000480807 ACSBG1Q96GR2 724 aa21.05■□□□□ 0.96
SNX8-208ENST00000480807 RGPD3A6NKT7 1758 aaPredicted RBP21.05■□□□□ 0.96
SNX8-208ENST00000480807 RGPD4Q7Z3J3 1758 aa21.05■□□□□ 0.96
SNX8-208ENST00000480807 KCNQ2O43526 872 aa21.04■□□□□ 0.96
SNX8-208ENST00000480807 NBPF6Q5VWK0 638 aa21.04■□□□□ 0.96
SNX8-208ENST00000480807 PROM2Q8N271 834 aa21.04■□□□□ 0.96
SNX8-208ENST00000480807 RAPGEF4Q8WZA2 1011 aa21.04■□□□□ 0.96
SNX8-208ENST00000480807 NBPF4Q96M43 638 aa21.04■□□□□ 0.96
SNX8-208ENST00000480807 ANO8Q9HCE9 1232 aaPredicted RBP21.04■□□□□ 0.96
SNX8-208ENST00000480807 NCAPD2Q15021 1401 aa21.03■□□□□ 0.96
SNX8-208ENST00000480807 PLEKHG2Q9H7P9 1386 aa21.02■□□□□ 0.96
SNX8-208ENST00000480807 TATP17735 454 aaPredicted RBP21.01■□□□□ 0.95
SNX8-208ENST00000480807 TXNRD1Q16881 649 aa21.01■□□□□ 0.95
SNX8-208ENST00000480807 CC2D1BQ5T0F9 858 aaKnown RBP21.01■□□□□ 0.95
SNX8-208ENST00000480807 MEGF6O75095 1541 aa21■□□□□ 0.95
SNX8-208ENST00000480807 SPON1Q9HCB6 807 aa21■□□□□ 0.95
SNX8-208ENST00000480807 SHANK3Q9BYB0 1731 aa21■□□□□ 0.95
SNX8-208ENST00000480807 EIF4A2Q14240 407 aaKnown RBP20.99■□□□□ 0.95
SNX8-208ENST00000480807 ZCRB1Q8TBF4 217 aaKnown RBP20.99■□□□□ 0.95
SNX8-208ENST00000480807 NHSQ6T4R5 1651 aa20.99■□□□□ 0.95
SNX8-208ENST00000480807 PKD1L3Q7Z443 1732 aa20.98■□□□□ 0.95
SNX8-208ENST00000480807 USHBP1Q8N6Y0 703 aa20.98■□□□□ 0.95
SNX8-208ENST00000480807 PPP1R1BQ9UD71 204 aaPredicted RBP20.98■□□□□ 0.95
SNX8-208ENST00000480807 DDX54Q8TDD1 881 aaKnown RBP20.97■□□□□ 0.95
SNX8-208ENST00000480807 EYA1Q99502 592 aa20.97■□□□□ 0.95
SNX8-208ENST00000480807 PDGFDQ9GZP0 370 aaPredicted RBP20.96■□□□□ 0.95
SNX8-208ENST00000480807 STK32BQ9NY57 414 aa20.96■□□□□ 0.95
SNX8-208ENST00000480807 IGSF1Q8N6C5 1336 aa20.95■□□□□ 0.94
SNX8-208ENST00000480807 PCDH11XQ9BZA7 1347 aa20.95■□□□□ 0.94
SNX8-208ENST00000480807 PCDH11YQ9BZA8 1340 aa20.95■□□□□ 0.94
SNX8-208ENST00000480807 MTHFSP49914 203 aa20.94■□□□□ 0.94
SNX8-208ENST00000480807 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.94■□□□□ 0.94
SNX8-208ENST00000480807 SLC15A2Q16348 729 aa20.93■□□□□ 0.94
SNX8-208ENST00000480807 ZBTB7AO95365 584 aa20.92■□□□□ 0.94
SNX8-208ENST00000480807 SPG7Q9UQ90 795 aa20.92■□□□□ 0.94
SNX8-208ENST00000480807 DOT1LQ8TEK3 1739 aa20.92■□□□□ 0.94
SNX8-208ENST00000480807 BTAF1O14981 1849 aa20.91■□□□□ 0.94
SNX8-208ENST00000480807 CASZ1Q86V15 1759 aa20.91■□□□□ 0.94
SNX8-208ENST00000480807 IL13P35225 146 aa20.89■□□□□ 0.93
SNX8-208ENST00000480807 SYTL4Q96C24 671 aaPredicted RBP20.89■□□□□ 0.93
SNX8-208ENST00000480807 CFAP53Q96M91 514 aa20.89■□□□□ 0.93
SNX8-208ENST00000480807 ATF5Q9Y2D1 282 aaPredicted RBP20.89■□□□□ 0.93
SNX8-208ENST00000480807 CNGB1Q14028 1251 aaPredicted RBP20.88■□□□□ 0.93
SNX8-208ENST00000480807 KDRP35968 1356 aa20.87■□□□□ 0.93
SNX8-208ENST00000480807 DIAPH1O60610 1272 aaKnown RBP20.87■□□□□ 0.93
SNX8-208ENST00000480807 AMOTQ4VCS5 1084 aa20.86■□□□□ 0.93
SNX8-208ENST00000480807 PRIM1P49642 420 aaKnown RBP20.85■□□□□ 0.93
SNX8-208ENST00000480807 PLEKHO1Q53GL0 409 aaPredicted RBP20.85■□□□□ 0.93
SNX8-208ENST00000480807 LRRC4BQ9NT99 713 aa20.85■□□□□ 0.93
SNX8-208ENST00000480807 ITGB4P16144 1822 aa20.85■□□□□ 0.93
SNX8-208ENST00000480807 SULT6B1Q6IMI4 303 aa20.84■□□□□ 0.93
SNX8-208ENST00000480807 COL3A1P02461 1466 aaPredicted RBP20.83■□□□□ 0.93
SNX8-208ENST00000480807 PTGER2P43116 358 aa20.83■□□□□ 0.93
SNX8-208ENST00000480807 DDX10Q13206 875 aaKnown RBP20.83■□□□□ 0.93
SNX8-208ENST00000480807 ZNF827Q17R98 1081 aa20.83■□□□□ 0.93
SNX8-208ENST00000480807 IFNL2Q8IZJ0 200 aa20.83■□□□□ 0.93
SNX8-208ENST00000480807 CYP27B1O15528 508 aa20.82■□□□□ 0.92
SNX8-208ENST00000480807 HSP90AB1P08238 724 aaKnown RBP20.82■□□□□ 0.92
SNX8-208ENST00000480807 PPP2R1AP30153 589 aa20.82■□□□□ 0.92
SNX8-208ENST00000480807 NKX1-1Q15270 411 aaPredicted RBP20.82■□□□□ 0.92
SNX8-208ENST00000480807 PAPPAQ13219 1627 aa20.82■□□□□ 0.92
SNX8-208ENST00000480807 DCAF8L1A6NGE4 600 aa20.81■□□□□ 0.92
SNX8-208ENST00000480807 RALBP1Q15311 655 aa20.81■□□□□ 0.92
SNX8-208ENST00000480807 MTFR1LQ9H019 292 aa20.81■□□□□ 0.92
SNX8-208ENST00000480807 NUDCQ9Y266 331 aa20.81■□□□□ 0.92
SNX8-208ENST00000480807 HMGB2P26583 209 aaKnown RBP20.8■□□□□ 0.92
SNX8-208ENST00000480807 KCNQ4P56696 695 aa20.8■□□□□ 0.92
SNX8-208ENST00000480807 SLC27A3Q5K4L6 730 aa20.8■□□□□ 0.92
SNX8-208ENST00000480807 LY75O60449 1722 aa20.79■□□□□ 0.92
SNX8-208ENST00000480807 TOGARAM1Q9Y4F4 1720 aa20.79■□□□□ 0.92
SNX8-208ENST00000480807 PHKG2P15735 406 aa20.79■□□□□ 0.92
SNX8-208ENST00000480807 C1orf141Q5JVX7 400 aa20.78■□□□□ 0.92
SNX8-208ENST00000480807 AEBP1Q8IUX7 1158 aa20.78■□□□□ 0.92
SNX8-208ENST00000480807 AKT1S1Q96B36 256 aa20.77■□□□□ 0.92
SNX8-208ENST00000480807 VIRMAQ69YN4 1812 aaKnown RBP20.76■□□□□ 0.91
SNX8-208ENST00000480807 U2SURPO15042 1029 aaKnown RBP20.76■□□□□ 0.91
SNX8-208ENST00000480807 ZNF530Q6P9A1 599 aaPredicted RBP20.76■□□□□ 0.91
SNX8-208ENST00000480807 YY1P25490 414 aa20.75■□□□□ 0.91
SNX8-208ENST00000480807 DCAF5Q96JK2 942 aa20.75■□□□□ 0.91
SNX8-208ENST00000480807 SGIP1Q9BQI5 828 aa20.75■□□□□ 0.91
SNX8-208ENST00000480807 FHDC1Q9C0D6 1143 aaPredicted RBP20.75■□□□□ 0.91
SNX8-208ENST00000480807 SCN11AQ9UI33 1791 aa20.74■□□□□ 0.91
SNX8-208ENST00000480807 HMOX1P09601 288 aa20.74■□□□□ 0.91
SNX8-208ENST00000480807 SYT17Q9BSW7 474 aa20.74■□□□□ 0.91
SNX8-208ENST00000480807 TFCP2L1Q9NZI6 479 aa20.74■□□□□ 0.91
SNX8-208ENST00000480807 CCNL1Q9UK58 526 aaPredicted RBP20.74■□□□□ 0.91
SNX8-208ENST00000480807 ZNF316A6NFI3 1004 aaPredicted RBP20.73■□□□□ 0.91
SNX8-208ENST00000480807 ERVV-2B6SEH9 535 aa20.73■□□□□ 0.91
SNX8-208ENST00000480807 SMARCC1Q92922 1105 aaPredicted RBP20.73■□□□□ 0.91
SNX8-208ENST00000480807 AKAP4Q5JQC9 854 aa20.72■□□□□ 0.91
SNX8-208ENST00000480807 MPRIPQ6WCQ1 1025 aa20.72■□□□□ 0.91
SNX8-208ENST00000480807 ARXQ96QS3 562 aa20.72■□□□□ 0.91
SNX8-208ENST00000480807 TMOD3Q9NYL9 352 aa20.72■□□□□ 0.91
SNX8-208ENST00000480807 PNPLA7Q6ZV29 1317 aa20.72■□□□□ 0.91
SNX8-208ENST00000480807 MYBBP1AQ9BQG0 1328 aaKnown RBP20.7■□□□□ 0.9
SNX8-208ENST00000480807 GAS2L2Q8NHY3 880 aa20.69■□□□□ 0.9
SNX8-208ENST00000480807 SLC16A10Q8TF71 515 aa20.69■□□□□ 0.9
SNX8-208ENST00000480807 QSER1Q2KHR3 1735 aa20.68■□□□□ 0.9
SNX8-208ENST00000480807 U2AF1L5P0DN76 240 aaPredicted RBP20.68■□□□□ 0.9
SNX8-208ENST00000480807 U2AF1Q01081 240 aaKnown RBP eCLIP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms