RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 FAM69CQ0P6D2 419 aa11.17□□□□□ -0.62
VEGFA-212ENST00000480614 RAB34Q9BZG1 259 aa11.17□□□□□ -0.62
VEGFA-212ENST00000480614 MTHFSP49914 203 aa11.17□□□□□ -0.62
VEGFA-212ENST00000480614 EIF5P55010 431 aaKnown RBP11.16□□□□□ -0.62
VEGFA-212ENST00000480614 ARHGAP29Q52LW3 1261 aa11.16□□□□□ -0.62
VEGFA-212ENST00000480614 ANAPC15P60006 121 aa11.16□□□□□ -0.62
VEGFA-212ENST00000480614 UPF3BQ9BZI7 483 aaKnown RBP11.16□□□□□ -0.62
VEGFA-212ENST00000480614 LRRFIP2Q9Y608 721 aaKnown RBP11.16□□□□□ -0.62
VEGFA-212ENST00000480614 CCDC141Q6ZP82 1450 aa11.16□□□□□ -0.62
VEGFA-212ENST00000480614 CABP4P57796 275 aa11.16□□□□□ -0.62
VEGFA-212ENST00000480614 PRKAR2BP31323 418 aa11.16□□□□□ -0.62
VEGFA-212ENST00000480614 ZNF76P36508 570 aa11.16□□□□□ -0.62
VEGFA-212ENST00000480614 PLCD4Q9BRC7 762 aa11.16□□□□□ -0.62
VEGFA-212ENST00000480614 ATAD2Q6PL18 1390 aa11.16□□□□□ -0.62
VEGFA-212ENST00000480614 NUP62CLQ9H1M0 184 aa11.15□□□□□ -0.62
VEGFA-212ENST00000480614 ZNF530Q6P9A1 599 aaPredicted RBP11.15□□□□□ -0.62
VEGFA-212ENST00000480614 GGNBP2Q9H3C7 697 aa11.15□□□□□ -0.62
VEGFA-212ENST00000480614 CCDC196A0A1B0GTZ2 297 aa11.15□□□□□ -0.62
VEGFA-212ENST00000480614 NOB1Q9ULX3 412 aaKnown RBP11.15□□□□□ -0.62
VEGFA-212ENST00000480614 SKIDA1Q1XH10 827 aa11.15□□□□□ -0.62
VEGFA-212ENST00000480614 PHF23Q9BUL5 403 aaPredicted RBP11.15□□□□□ -0.62
VEGFA-212ENST00000480614 IGHMBP2P38935 993 aaKnown RBP11.15□□□□□ -0.62
VEGFA-212ENST00000480614 CEBPZQ03701 1054 aaKnown RBP11.15□□□□□ -0.62
VEGFA-212ENST00000480614 HOOK3Q86VS8 718 aa11.15□□□□□ -0.62
VEGFA-212ENST00000480614 TSG101Q99816 390 aa11.15□□□□□ -0.62
VEGFA-212ENST00000480614 NF2P35240 595 aa11.15□□□□□ -0.62
VEGFA-212ENST00000480614 SPA17Q15506 151 aa11.15□□□□□ -0.62
VEGFA-212ENST00000480614 ZNF692Q9BU19 519 aaPredicted RBP11.15□□□□□ -0.62
VEGFA-212ENST00000480614 SPC24Q8NBT2 197 aa11.15□□□□□ -0.62
VEGFA-212ENST00000480614 ADAMTS8Q9UP79 889 aa11.15□□□□□ -0.62
VEGFA-212ENST00000480614 AACSQ86V21 672 aa11.15□□□□□ -0.63
VEGFA-212ENST00000480614 FAM135AQ9P2D6 1515 aa11.15□□□□□ -0.63
VEGFA-212ENST00000480614 CRACR2AQ9BSW2 395 aa11.15□□□□□ -0.63
VEGFA-212ENST00000480614 RBM42Q9BTD8 480 aaKnown RBP11.15□□□□□ -0.63
VEGFA-212ENST00000480614 SH2B1Q9NRF2 756 aaPredicted RBP11.15□□□□□ -0.63
VEGFA-212ENST00000480614 PPP2R1AP30153 589 aa11.14□□□□□ -0.63
VEGFA-212ENST00000480614 CEP126Q9P2H0 1117 aa11.14□□□□□ -0.63
VEGFA-212ENST00000480614 ZNF652Q9Y2D9 606 aa11.14□□□□□ -0.63
VEGFA-212ENST00000480614 SSBP05455 408 aaKnown RBP eCLIP11.14□□□□□ -0.639e-13■■□□□ 11.9
VEGFA-212ENST00000480614 CCDC83Q8IWF9 413 aa11.14□□□□□ -0.63
VEGFA-212ENST00000480614 SSR1P43307 286 aaKnown RBP11.14□□□□□ -0.63
VEGFA-212ENST00000480614 PDRG1Q9NUG6 133 aa11.14□□□□□ -0.63
VEGFA-212ENST00000480614 CTAGE5O15320 804 aa11.14□□□□□ -0.63
VEGFA-212ENST00000480614 NUP133Q8WUM0 1156 aa11.14□□□□□ -0.63
VEGFA-212ENST00000480614 EHMT1Q9H9B1 1298 aa11.14□□□□□ -0.63
VEGFA-212ENST00000480614 GRIN2BQ13224 1484 aa11.14□□□□□ -0.63
VEGFA-212ENST00000480614 FKBP15Q5T1M5 1219 aa11.14□□□□□ -0.63
VEGFA-212ENST00000480614 SFPQP23246 707 aaKnown RBP eCLIP11.14□□□□□ -0.63
VEGFA-212ENST00000480614 MAP3K11Q16584 847 aa11.14□□□□□ -0.63
VEGFA-212ENST00000480614 RPGRIP1LQ68CZ1 1315 aa11.14□□□□□ -0.63
VEGFA-212ENST00000480614 SLF2Q8IX21 1173 aa11.14□□□□□ -0.63
VEGFA-212ENST00000480614 SLC52A1Q9NWF4 448 aa11.14□□□□□ -0.63
VEGFA-212ENST00000480614 PDZRN3Q9UPQ7 1066 aa11.14□□□□□ -0.63
VEGFA-212ENST00000480614 KIAA1107Q9UPP5 1409 aa11.13□□□□□ -0.63
VEGFA-212ENST00000480614 ZSCAN12O43309 604 aa11.13□□□□□ -0.63
VEGFA-212ENST00000480614 IL27Q8NEV9 243 aa11.13□□□□□ -0.63
VEGFA-212ENST00000480614 ANKRD30BQ9BXX2 1392 aa11.13□□□□□ -0.63
VEGFA-212ENST00000480614 CUL7Q14999 1698 aa11.13□□□□□ -0.63
VEGFA-212ENST00000480614 UBXN4Q92575 508 aa11.13□□□□□ -0.63
VEGFA-212ENST00000480614 SLC4A2P04920 1241 aa11.13□□□□□ -0.63
VEGFA-212ENST00000480614 RBM5P52756 815 aaKnown RBP eCLIP11.13□□□□□ -0.631e-9■□□□□ 9.1
VEGFA-212ENST00000480614 CETN1Q12798 172 aa11.13□□□□□ -0.63
VEGFA-212ENST00000480614 CYB5RLQ6IPT4 315 aa11.13□□□□□ -0.63
VEGFA-212ENST00000480614 EPRSP07814 1512 aaKnown RBP11.13□□□□□ -0.63
VEGFA-212ENST00000480614 MVPQ14764 893 aaKnown RBP11.12□□□□□ -0.63
VEGFA-212ENST00000480614 ESCO1Q5FWF5 840 aa11.12□□□□□ -0.63
VEGFA-212ENST00000480614 THEMISQ8N1K5 641 aaPredicted RBP11.12□□□□□ -0.63
VEGFA-212ENST00000480614 TAOK3Q9H2K8 898 aa11.12□□□□□ -0.63
VEGFA-212ENST00000480614 POTEB2H3BUK9 544 aa11.12□□□□□ -0.63
VEGFA-212ENST00000480614 PYM1Q9BRP8 204 aaKnown RBP11.12□□□□□ -0.63
VEGFA-212ENST00000480614 STRN4Q9NRL3 753 aa11.12□□□□□ -0.63
VEGFA-212ENST00000480614 TTC21AQ8NDW8 1320 aa11.12□□□□□ -0.63
VEGFA-212ENST00000480614 GCOM1H8Y6P7 765 aaPredicted RBP11.12□□□□□ -0.63
VEGFA-212ENST00000480614 MYZAPP0CAP1 466 aa11.12□□□□□ -0.63
VEGFA-212ENST00000480614 ERBINQ96RT1 1412 aa11.12□□□□□ -0.63
VEGFA-212ENST00000480614 SHTN1A0MZ66 631 aa11.12□□□□□ -0.63
VEGFA-212ENST00000480614 RAB11FIP3O75154 756 aa11.12□□□□□ -0.63
VEGFA-212ENST00000480614 GRPEL1Q9HAV7 217 aa11.12□□□□□ -0.63
VEGFA-212ENST00000480614 TMEM266Q2M3C6 531 aa11.12□□□□□ -0.63
VEGFA-212ENST00000480614 DDX12PQ92771 950 aa11.12□□□□□ -0.63
VEGFA-212ENST00000480614 KIF5CO60282 957 aa11.12□□□□□ -0.63
VEGFA-212ENST00000480614 MICALCLQ6ZW33 695 aa11.12□□□□□ -0.63
VEGFA-212ENST00000480614 BRPF3Q9ULD4 1205 aa11.12□□□□□ -0.63
VEGFA-212ENST00000480614 AKAP2Q9Y2D5 859 aa11.12□□□□□ -0.63
VEGFA-212ENST00000480614 GIGYF2Q6Y7W6 1299 aaKnown RBP11.12□□□□□ -0.63
VEGFA-212ENST00000480614 UBE2Q2Q8WVN8 375 aa11.12□□□□□ -0.63
VEGFA-212ENST00000480614 SCAND2PQ9GZW5 306 aaPredicted RBP11.12□□□□□ -0.63
VEGFA-212ENST00000480614 FAM193AP78312 1265 aa11.11□□□□□ -0.63
VEGFA-212ENST00000480614 SMC1AQ14683 1233 aaKnown RBP11.11□□□□□ -0.63
VEGFA-212ENST00000480614 NUTM2GQ5VZR2 741 aa11.11□□□□□ -0.63
VEGFA-212ENST00000480614 BBXQ8WY36 941 aaPredicted RBP11.11□□□□□ -0.63
VEGFA-212ENST00000480614 PPM1EQ8WY54 764 aa11.11□□□□□ -0.63
VEGFA-212ENST00000480614 CCDC97Q96F63 343 aaPredicted RBP11.11□□□□□ -0.63
VEGFA-212ENST00000480614 RTEL1-TNFRSF6BF6WH68 1400 aa11.11□□□□□ -0.63
VEGFA-212ENST00000480614 KIF20AO95235 890 aa11.11□□□□□ -0.63
VEGFA-212ENST00000480614 CAVIN2O95810 425 aa11.11□□□□□ -0.63
VEGFA-212ENST00000480614 AIDAQ96BJ3 306 aa11.11□□□□□ -0.63
VEGFA-212ENST00000480614 HMGB1P09429 215 aaKnown RBP11.11□□□□□ -0.63
VEGFA-212ENST00000480614 FKBP4Q02790 459 aaKnown RBP eCLIP11.1□□□□□ -0.63
VEGFA-212ENST00000480614 GRIPAP1Q4V328 841 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms