RNA–Protein interactions for RNA: ENST00000480339.1

TRMT2A-213, Transcript of tRNA methyltransferase 2 homolog A, humanhuman

TSL 2

Gene TRMT2A, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT2A-213ENST00000480339 CCNL1Q9UK58 526 aaPredicted RBP17.32■□□□□ 0.36
TRMT2A-213ENST00000480339 LTN1O94822 1766 aa17.32■□□□□ 0.36
TRMT2A-213ENST00000480339 COL24A1Q17RW2 1714 aa17.32■□□□□ 0.36
TRMT2A-213ENST00000480339 A0A1W2PP64 1363 aa17.31■□□□□ 0.36
TRMT2A-213ENST00000480339 GRIN3BO60391 1043 aa17.31■□□□□ 0.36
TRMT2A-213ENST00000480339 CARD11Q9BXL7 1154 aa17.31■□□□□ 0.36
TRMT2A-213ENST00000480339 TERF2IPQ9NYB0 399 aa17.31■□□□□ 0.36
TRMT2A-213ENST00000480339 SHANK3Q9BYB0 1731 aa17.3■□□□□ 0.36
TRMT2A-213ENST00000480339 MAP3K19Q56UN5 1328 aa17.3■□□□□ 0.36
TRMT2A-213ENST00000480339 MSH5O43196 834 aa17.3■□□□□ 0.36
TRMT2A-213ENST00000480339 HOXC9P31274 260 aa17.3■□□□□ 0.36
TRMT2A-213ENST00000480339 MSL1Q68DK7 614 aa17.3■□□□□ 0.36
TRMT2A-213ENST00000480339 QSER1Q2KHR3 1735 aa17.29■□□□□ 0.36
TRMT2A-213ENST00000480339 NBPF6Q5VWK0 638 aa17.27■□□□□ 0.36
TRMT2A-213ENST00000480339 NBPF4Q96M43 638 aa17.27■□□□□ 0.36
TRMT2A-213ENST00000480339 MEGF6O75095 1541 aa17.26■□□□□ 0.35
TRMT2A-213ENST00000480339 TUBGCP6Q96RT7 1819 aa17.26■□□□□ 0.35
TRMT2A-213ENST00000480339 AMPHP49418 695 aa17.26■□□□□ 0.35
TRMT2A-213ENST00000480339 PUS7Q96PZ0 661 aaKnown RBP17.26■□□□□ 0.35
TRMT2A-213ENST00000480339 ATP10DQ9P241 1426 aa17.25■□□□□ 0.35
TRMT2A-213ENST00000480339 CEP350Q5VT06 3117 aa17.25■□□□□ 0.35
TRMT2A-213ENST00000480339 USHBP1Q8N6Y0 703 aa17.25■□□□□ 0.35
TRMT2A-213ENST00000480339 COG3Q96JB2 828 aa17.25■□□□□ 0.35
TRMT2A-213ENST00000480339 LY75O60449 1722 aa17.24■□□□□ 0.35
TRMT2A-213ENST00000480339 CD2APQ9Y5K6 639 aa17.24■□□□□ 0.35
TRMT2A-213ENST00000480339 USP47Q96K76 1375 aa17.24■□□□□ 0.35
TRMT2A-213ENST00000480339 FAM208AQ9UK61 1670 aaKnown RBP17.23■□□□□ 0.35
TRMT2A-213ENST00000480339 DOT1LQ8TEK3 1739 aa17.22■□□□□ 0.35
TRMT2A-213ENST00000480339 RRS1Q15050 365 aaKnown RBP17.22■□□□□ 0.35
TRMT2A-213ENST00000480339 SMIM5Q71RC9 77 aa17.22■□□□□ 0.35
TRMT2A-213ENST00000480339 AMIGO3Q86WK7 504 aa17.22■□□□□ 0.35
TRMT2A-213ENST00000480339 TESK2Q96S53 571 aa17.22■□□□□ 0.35
TRMT2A-213ENST00000480339 GPBP1L1Q9HC44 474 aaPredicted RBP17.21■□□□□ 0.35
TRMT2A-213ENST00000480339 ZNF526Q8TF50 670 aaPredicted RBP17.2■□□□□ 0.34
TRMT2A-213ENST00000480339 MPRIPQ6WCQ1 1025 aa17.19■□□□□ 0.34
TRMT2A-213ENST00000480339 RGPD2P0DJD1 1756 aa17.19■□□□□ 0.34
TRMT2A-213ENST00000480339 FYB1O15117 783 aa17.18■□□□□ 0.34
TRMT2A-213ENST00000480339 FLAD1Q8NFF5 587 aa17.18■□□□□ 0.34
TRMT2A-213ENST00000480339 RAPGEF4Q8WZA2 1011 aa17.18■□□□□ 0.34
TRMT2A-213ENST00000480339 WWC3Q9ULE0 1092 aa17.18■□□□□ 0.34
TRMT2A-213ENST00000480339 CGNL1Q0VF96 1302 aa17.18■□□□□ 0.34
TRMT2A-213ENST00000480339 ADCY9O60503 1353 aa17.17■□□□□ 0.34
TRMT2A-213ENST00000480339 ST20-MTHFSA0A0A6YYL1 179 aa17.17■□□□□ 0.34
TRMT2A-213ENST00000480339 HSPA6P17066 643 aa17.17■□□□□ 0.34
TRMT2A-213ENST00000480339 TATP17735 454 aaPredicted RBP17.17■□□□□ 0.34
TRMT2A-213ENST00000480339 HSP90AB2PQ58FF8 381 aa17.17■□□□□ 0.34
TRMT2A-213ENST00000480339 GGNBP2Q9H3C7 697 aa17.17■□□□□ 0.34
TRMT2A-213ENST00000480339 PALLDQ8WX93 1383 aa17.16■□□□□ 0.34
TRMT2A-213ENST00000480339 CYP27B1O15528 508 aa17.16■□□□□ 0.34
TRMT2A-213ENST00000480339 RTL1A6NKG5 1358 aa17.15■□□□□ 0.34
TRMT2A-213ENST00000480339 IGSF1Q8N6C5 1336 aa17.14■□□□□ 0.33
TRMT2A-213ENST00000480339 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.13■□□□□ 0.33
TRMT2A-213ENST00000480339 PHF14O94880 888 aa17.13■□□□□ 0.33
TRMT2A-213ENST00000480339 PIGBQ92521 554 aa17.13■□□□□ 0.33
TRMT2A-213ENST00000480339 AK7Q96M32 723 aa17.13■□□□□ 0.33
TRMT2A-213ENST00000480339 PCDH11XQ9BZA7 1347 aa17.13■□□□□ 0.33
TRMT2A-213ENST00000480339 PCDH11YQ9BZA8 1340 aa17.13■□□□□ 0.33
TRMT2A-213ENST00000480339 KIF3CO14782 793 aa17.12■□□□□ 0.33
TRMT2A-213ENST00000480339 SMARCC1Q92922 1105 aaPredicted RBP17.11■□□□□ 0.33
TRMT2A-213ENST00000480339 INSRP06213 1382 aa17.11■□□□□ 0.33
TRMT2A-213ENST00000480339 C5P01031 1676 aa17.1■□□□□ 0.33
TRMT2A-213ENST00000480339 HMGB2P26583 209 aaKnown RBP17.1■□□□□ 0.33
TRMT2A-213ENST00000480339 LINC00116Q8NCU8 138 aa17.1■□□□□ 0.33
TRMT2A-213ENST00000480339 SMG6Q86US8 1419 aaKnown RBP17.08■□□□□ 0.32
TRMT2A-213ENST00000480339 TONSLQ96HA7 1378 aa17.08■□□□□ 0.32
TRMT2A-213ENST00000480339 ITPK1Q13572 414 aa17.08■□□□□ 0.32
TRMT2A-213ENST00000480339 NKX1-1Q15270 411 aaPredicted RBP17.08■□□□□ 0.32
TRMT2A-213ENST00000480339 C4BP0C0L5 1744 aa17.07■□□□□ 0.32
TRMT2A-213ENST00000480339 LOC102724428A0A0B4J2F2 783 aa17.07■□□□□ 0.32
TRMT2A-213ENST00000480339 SSFA2P28290 1259 aa17.07■□□□□ 0.32
TRMT2A-213ENST00000480339 SIK1P57059 783 aa17.07■□□□□ 0.32
TRMT2A-213ENST00000480339 TAF1LQ8IZX4 1826 aa17.07■□□□□ 0.32
TRMT2A-213ENST00000480339 TOGARAM1Q9Y4F4 1720 aa17.07■□□□□ 0.32
TRMT2A-213ENST00000480339 FLT4P35916 1363 aa17.06■□□□□ 0.32
TRMT2A-213ENST00000480339 ASAP1Q9ULH1 1129 aa17.06■□□□□ 0.32
TRMT2A-213ENST00000480339 EMILIN1Q9Y6C2 1016 aa17.06■□□□□ 0.32
TRMT2A-213ENST00000480339 SLC24A1O60721 1099 aa17.05■□□□□ 0.32
TRMT2A-213ENST00000480339 CARD14Q9BXL6 1004 aa17.05■□□□□ 0.32
TRMT2A-213ENST00000480339 DNAJC5GQ8N7S2 189 aa17.04■□□□□ 0.32
TRMT2A-213ENST00000480339 GNPATO15228 680 aa17.03■□□□□ 0.32
TRMT2A-213ENST00000480339 MMP10P09238 476 aa17.03■□□□□ 0.32
TRMT2A-213ENST00000480339 ATP6V1AP38606 617 aa17.03■□□□□ 0.32
TRMT2A-213ENST00000480339 KIF24Q5T7B8 1368 aa17.02■□□□□ 0.32
TRMT2A-213ENST00000480339 UBR3Q6ZT12 1888 aa17.02■□□□□ 0.32
TRMT2A-213ENST00000480339 TMF1P82094 1093 aa17.02■□□□□ 0.32
TRMT2A-213ENST00000480339 ATG3Q9NT62 314 aa17.02■□□□□ 0.32
TRMT2A-213ENST00000480339 SPG7Q9UQ90 795 aa17.02■□□□□ 0.32
TRMT2A-213ENST00000480339 A0A0G2JLW4 131 aa17.01■□□□□ 0.31
TRMT2A-213ENST00000480339 EYA1Q99502 592 aa17.01■□□□□ 0.31
TRMT2A-213ENST00000480339 TMOD3Q9NYL9 352 aa17.01■□□□□ 0.31
TRMT2A-213ENST00000480339 NSD3Q9BZ95 1437 aa17.01■□□□□ 0.31
TRMT2A-213ENST00000480339 MAP2P11137 1827 aaKnown RBP17■□□□□ 0.31
TRMT2A-213ENST00000480339 ITGB4P16144 1822 aa17■□□□□ 0.31
TRMT2A-213ENST00000480339 PPM1GO15355 546 aaPredicted RBP17■□□□□ 0.31
TRMT2A-213ENST00000480339 APLP1P51693 650 aa17■□□□□ 0.31
TRMT2A-213ENST00000480339 NCAPD2Q15021 1401 aa17■□□□□ 0.31
TRMT2A-213ENST00000480339 SLC4A9Q96Q91 983 aa17■□□□□ 0.31
TRMT2A-213ENST00000480339 BCS1LQ9Y276 419 aa17■□□□□ 0.31
TRMT2A-213ENST00000480339 PXDNLA1KZ92 1463 aa16.99■□□□□ 0.31
TRMT2A-213ENST00000480339 TOMM70O94826 608 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms