RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 RAPGEF4Q8WZA2 1011 aa22.19■■□□□ 1.14
SCAMP3-207ENST00000480219 SPATA31A1Q5TZJ5 1347 aa22.19■■□□□ 1.14
SCAMP3-207ENST00000480219 MTHFSDQ2M296 383 aaKnown RBP22.18■■□□□ 1.14
SCAMP3-207ENST00000480219 TRIM35Q9UPQ4 493 aa22.18■■□□□ 1.14
SCAMP3-207ENST00000480219 DLG5Q8TDM6 1919 aa22.18■■□□□ 1.14
SCAMP3-207ENST00000480219 TATP17735 454 aaPredicted RBP22.17■■□□□ 1.14
SCAMP3-207ENST00000480219 PLEKHO1Q53GL0 409 aaPredicted RBP22.17■■□□□ 1.14
SCAMP3-207ENST00000480219 HTATSF1O43719 755 aaKnown RBP22.16■■□□□ 1.14
SCAMP3-207ENST00000480219 RIPK4P57078 832 aa22.16■■□□□ 1.14
SCAMP3-207ENST00000480219 MEX3CQ5U5Q3 659 aaKnown RBP22.16■■□□□ 1.14
SCAMP3-207ENST00000480219 WWC1Q8IX03 1113 aa22.16■■□□□ 1.14
SCAMP3-207ENST00000480219 ATRNO75882 1429 aa22.15■■□□□ 1.14
SCAMP3-207ENST00000480219 AFF2P51816 1311 aa22.15■■□□□ 1.14
SCAMP3-207ENST00000480219 ADAMTS7Q9UKP4 1686 aa22.15■■□□□ 1.14
SCAMP3-207ENST00000480219 IL2RBP14784 551 aa22.15■■□□□ 1.14
SCAMP3-207ENST00000480219 LMOD3Q0VAK6 560 aa22.15■■□□□ 1.14
SCAMP3-207ENST00000480219 PDE3BQ13370 1112 aa22.15■■□□□ 1.14
SCAMP3-207ENST00000480219 BARGINQ6ZT62 677 aa22.15■■□□□ 1.14
SCAMP3-207ENST00000480219 USP21Q9UK80 565 aa22.15■■□□□ 1.14
SCAMP3-207ENST00000480219 RRP7AQ9Y3A4 280 aaKnown RBP22.15■■□□□ 1.14
SCAMP3-207ENST00000480219 WDR63Q8IWG1 891 aa22.14■■□□□ 1.13
SCAMP3-207ENST00000480219 CDCA7Q9BWT1 371 aaPredicted RBP22.14■■□□□ 1.13
SCAMP3-207ENST00000480219 SHANK3Q9BYB0 1731 aa22.13■■□□□ 1.13
SCAMP3-207ENST00000480219 LRRC37A3O60309 1634 aa22.13■■□□□ 1.13
SCAMP3-207ENST00000480219 MAP3K5Q99683 1374 aa22.12■■□□□ 1.13
SCAMP3-207ENST00000480219 SPG7Q9UQ90 795 aa22.12■■□□□ 1.13
SCAMP3-207ENST00000480219 IL16Q14005 1332 aa22.11■■□□□ 1.13
SCAMP3-207ENST00000480219 AKAP4Q5JQC9 854 aa22.11■■□□□ 1.13
SCAMP3-207ENST00000480219 GLI3P10071 1580 aa22.1■■□□□ 1.13
SCAMP3-207ENST00000480219 NEUROD2Q15784 382 aa22.1■■□□□ 1.13
SCAMP3-207ENST00000480219 CEMIPQ8WUJ3 1361 aa22.1■■□□□ 1.13
SCAMP3-207ENST00000480219 SENP3-EIF4A1A0A087X0R7 540 aa22.09■■□□□ 1.13
SCAMP3-207ENST00000480219 GNAT3A8MTJ3 354 aa22.09■■□□□ 1.13
SCAMP3-207ENST00000480219 TRMT2AQ8IZ69 625 aaKnown RBP22.09■■□□□ 1.13
SCAMP3-207ENST00000480219 SALL2Q9Y467 1007 aaPredicted RBP22.09■■□□□ 1.13
SCAMP3-207ENST00000480219 THSD7AQ9UPZ6 1657 aa22.08■■□□□ 1.13
SCAMP3-207ENST00000480219 TNS2Q63HR2 1409 aa22.08■■□□□ 1.13
SCAMP3-207ENST00000480219 ZNF530Q6P9A1 599 aaPredicted RBP22.08■■□□□ 1.13
SCAMP3-207ENST00000480219 ZCRB1Q8TBF4 217 aaKnown RBP22.08■■□□□ 1.13
SCAMP3-207ENST00000480219 TRPC5Q9UL62 973 aaPredicted RBP22.08■■□□□ 1.13
SCAMP3-207ENST00000480219 PHKG2P15735 406 aa22.07■■□□□ 1.12
SCAMP3-207ENST00000480219 GOLGA2Q08379 1002 aa22.07■■□□□ 1.12
SCAMP3-207ENST00000480219 PCDH11XQ9BZA7 1347 aa22.06■■□□□ 1.12
SCAMP3-207ENST00000480219 PCDH11YQ9BZA8 1340 aa22.06■■□□□ 1.12
SCAMP3-207ENST00000480219 CYP27B1O15528 508 aa22.06■■□□□ 1.12
SCAMP3-207ENST00000480219 CALD1Q05682 793 aaKnown RBP22.06■■□□□ 1.12
SCAMP3-207ENST00000480219 IFNL2Q8IZJ0 200 aa22.06■■□□□ 1.12
SCAMP3-207ENST00000480219 USP35Q9P2H5 1018 aa22.06■■□□□ 1.12
SCAMP3-207ENST00000480219 ONECUT3O60422 494 aaPredicted RBP22.05■■□□□ 1.12
SCAMP3-207ENST00000480219 SLFN5Q08AF3 891 aa22.05■■□□□ 1.12
SCAMP3-207ENST00000480219 NKX1-1Q15270 411 aaPredicted RBP22.05■■□□□ 1.12
SCAMP3-207ENST00000480219 GJD4Q96KN9 370 aaPredicted RBP22.05■■□□□ 1.12
SCAMP3-207ENST00000480219 E9PSI1 815 aa22.04■■□□□ 1.12
SCAMP3-207ENST00000480219 C1orf141Q5JVX7 400 aa22.04■■□□□ 1.12
SCAMP3-207ENST00000480219 IL17REQ8NFR9 667 aa22.04■■□□□ 1.12
SCAMP3-207ENST00000480219 MRC1P22897 1456 aa22.03■■□□□ 1.12
SCAMP3-207ENST00000480219 HSP90AB1P08238 724 aaKnown RBP22.03■■□□□ 1.12
SCAMP3-207ENST00000480219 ZNF853P0CG23 659 aa22.03■■□□□ 1.12
SCAMP3-207ENST00000480219 RTF1Q92541 710 aaKnown RBP22.03■■□□□ 1.12
SCAMP3-207ENST00000480219 KDM6AO15550 1401 aaPredicted RBP22.03■■□□□ 1.12
SCAMP3-207ENST00000480219 SCN11AQ9UI33 1791 aa22.02■■□□□ 1.12
SCAMP3-207ENST00000480219 ZNF772Q68DY9 489 aaPredicted RBP22.02■■□□□ 1.12
SCAMP3-207ENST00000480219 SPINK5Q9NQ38 1064 aaPredicted RBP22.02■■□□□ 1.12
SCAMP3-207ENST00000480219 DUSP27Q5VZP5 1158 aa22.01■■□□□ 1.11
SCAMP3-207ENST00000480219 CDCA7LQ96GN5 454 aa22.01■■□□□ 1.11
SCAMP3-207ENST00000480219 IFT57Q9NWB7 429 aa22.01■■□□□ 1.11
SCAMP3-207ENST00000480219 CCDC9Q9Y3X0 531 aaKnown RBP22.01■■□□□ 1.11
SCAMP3-207ENST00000480219 SIPA1L3O60292 1781 aaPredicted RBP22■■□□□ 1.11
SCAMP3-207ENST00000480219 RNMTO43148 476 aaKnown RBP22■■□□□ 1.11
SCAMP3-207ENST00000480219 DCTN1Q14203 1278 aa22■■□□□ 1.11
SCAMP3-207ENST00000480219 MCM10Q7L590 875 aa22■■□□□ 1.11
SCAMP3-207ENST00000480219 DCAF5Q96JK2 942 aa22■■□□□ 1.11
SCAMP3-207ENST00000480219 QTRT2Q9H974 415 aaKnown RBP22■■□□□ 1.11
SCAMP3-207ENST00000480219 BABAM1Q9NWV8 329 aa22■■□□□ 1.11
SCAMP3-207ENST00000480219 VIRMAQ69YN4 1812 aaKnown RBP22■■□□□ 1.11
SCAMP3-207ENST00000480219 EXOC5O00471 708 aa21.99■■□□□ 1.11
SCAMP3-207ENST00000480219 CENPBP07199 599 aaPredicted RBP21.99■■□□□ 1.11
SCAMP3-207ENST00000480219 CFAP44Q96MT7 982 aa21.99■■□□□ 1.11
SCAMP3-207ENST00000480219 THUMPD2Q9BTF0 503 aaKnown RBP21.99■■□□□ 1.11
SCAMP3-207ENST00000480219 FAM98CQ17RN3 349 aaKnown RBP21.98■■□□□ 1.11
SCAMP3-207ENST00000480219 CHL1O00533 1208 aa21.97■■□□□ 1.11
SCAMP3-207ENST00000480219 GNAI1P63096 354 aa21.97■■□□□ 1.11
SCAMP3-207ENST00000480219 DDB1Q16531 1140 aa21.97■■□□□ 1.11
SCAMP3-207ENST00000480219 MYH16Q9H6N6 1097 aa21.97■■□□□ 1.11
SCAMP3-207ENST00000480219 LGR6Q9HBX8 967 aa21.97■■□□□ 1.11
SCAMP3-207ENST00000480219 MPRIPQ6WCQ1 1025 aa21.96■■□□□ 1.11
SCAMP3-207ENST00000480219 BCL9O00512 1426 aa21.95■■□□□ 1.1
SCAMP3-207ENST00000480219 TOGARAM1Q9Y4F4 1720 aa21.94■■□□□ 1.1
SCAMP3-207ENST00000480219 ERVV-2B6SEH9 535 aa21.94■■□□□ 1.1
SCAMP3-207ENST00000480219 RGS17Q9UGC6 210 aaPredicted RBP21.94■■□□□ 1.1
SCAMP3-207ENST00000480219 FANCIQ9NVI1 1328 aa21.94■■□□□ 1.1
SCAMP3-207ENST00000480219 RBM6P78332 1123 aaKnown RBP21.93■■□□□ 1.1
SCAMP3-207ENST00000480219 TAF7Q15545 349 aaPredicted RBP21.93■■□□□ 1.1
SCAMP3-207ENST00000480219 KDM3BQ7LBC6 1761 aa21.92■■□□□ 1.1
SCAMP3-207ENST00000480219 ILDR1Q86SU0 546 aaPredicted RBP21.92■■□□□ 1.1
SCAMP3-207ENST00000480219 DDX54Q8TDD1 881 aaKnown RBP21.92■■□□□ 1.1
SCAMP3-207ENST00000480219 SLC52A2Q9HAB3 445 aa21.92■■□□□ 1.1
SCAMP3-207ENST00000480219 MARCH10Q8NA82 808 aaPredicted RBP21.91■■□□□ 1.1
SCAMP3-207ENST00000480219 TEFQ10587 303 aa21.9■■□□□ 1.1
SCAMP3-207ENST00000480219 MBIPQ9NS73 344 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms