RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 DNAAF4Q8WXU2 420 aa7.22□□□□□ -1.25
PRPF4B-205ENST00000480058 U3KPZ7 1027 aaPredicted RBP7.22□□□□□ -1.25
PRPF4B-205ENST00000480058 NPHP3Q7Z494 1330 aa7.22□□□□□ -1.25
PRPF4B-205ENST00000480058 EZRP15311 586 aaKnown RBP7.22□□□□□ -1.25
PRPF4B-205ENST00000480058 WASHC4Q2M389 1173 aa7.22□□□□□ -1.25
PRPF4B-205ENST00000480058 C9orf84Q5VXU9 1444 aa7.22□□□□□ -1.25
PRPF4B-205ENST00000480058 BMP15O95972 392 aa7.21□□□□□ -1.25
PRPF4B-205ENST00000480058 CCDC57Q2TAC2 916 aa7.21□□□□□ -1.25
PRPF4B-205ENST00000480058 PDRG1Q9NUG6 133 aa7.21□□□□□ -1.25
PRPF4B-205ENST00000480058 TMPOP42166 694 aaKnown RBP7.21□□□□□ -1.25
PRPF4B-205ENST00000480058 CCDC158Q5M9N0 1113 aa7.21□□□□□ -1.25
PRPF4B-205ENST00000480058 CCDC148Q8NFR7 591 aa7.21□□□□□ -1.25
PRPF4B-205ENST00000480058 GNL3LQ9NVN8 582 aaKnown RBP7.21□□□□□ -1.25
PRPF4B-205ENST00000480058 PRKCSHP14314 528 aaPredicted RBP7.21□□□□□ -1.26
PRPF4B-205ENST00000480058 UBE2HP62256 183 aa7.21□□□□□ -1.26
PRPF4B-205ENST00000480058 CCDC150Q8NCX0 1101 aa7.21□□□□□ -1.26
PRPF4B-205ENST00000480058 HMG20BQ9P0W2 317 aa7.21□□□□□ -1.26
PRPF4B-205ENST00000480058 NOB1Q9ULX3 412 aaKnown RBP7.21□□□□□ -1.26
PRPF4B-205ENST00000480058 TULP1O00294 542 aaPredicted RBP7.21□□□□□ -1.26
PRPF4B-205ENST00000480058 IVLP07476 585 aa7.21□□□□□ -1.26
PRPF4B-205ENST00000480058 INTS4Q96HW7 963 aaKnown RBP7.21□□□□□ -1.26
PRPF4B-205ENST00000480058 SLC4A2P04920 1241 aa7.21□□□□□ -1.26
PRPF4B-205ENST00000480058 CETN2P41208 172 aa7.21□□□□□ -1.26
PRPF4B-205ENST00000480058 NAP1L1P55209 391 aaKnown RBP7.21□□□□□ -1.26
PRPF4B-205ENST00000480058 TCEAL9Q9UHQ7 104 aa7.21□□□□□ -1.26
PRPF4B-205ENST00000480058 SOS1Q07889 1333 aaPredicted RBP7.21□□□□□ -1.26
PRPF4B-205ENST00000480058 ODF2Q5BJF6 829 aa7.2□□□□□ -1.26
PRPF4B-205ENST00000480058 CCDC181Q5TID7 509 aa7.2□□□□□ -1.26
PRPF4B-205ENST00000480058 SMC5Q8IY18 1101 aa7.2□□□□□ -1.26
PRPF4B-205ENST00000480058 KRT222Q8N1A0 295 aa7.2□□□□□ -1.26
PRPF4B-205ENST00000480058 ZSCAN16Q9H4T2 348 aaPredicted RBP7.2□□□□□ -1.26
PRPF4B-205ENST00000480058 CEP126Q9P2H0 1117 aa7.2□□□□□ -1.26
PRPF4B-205ENST00000480058 CCDC61Q9Y6R9 512 aa7.2□□□□□ -1.26
PRPF4B-205ENST00000480058 V9GYY5 206 aaPredicted RBP7.2□□□□□ -1.26
PRPF4B-205ENST00000480058 MX1P20591 662 aa7.2□□□□□ -1.26
PRPF4B-205ENST00000480058 DUSP27Q5VZP5 1158 aa7.2□□□□□ -1.26
PRPF4B-205ENST00000480058 KANK3Q6NY19 840 aa7.2□□□□□ -1.26
PRPF4B-205ENST00000480058 PTPRCP08575 1304 aa7.2□□□□□ -1.26
PRPF4B-205ENST00000480058 TIAM1Q13009 1591 aa7.2□□□□□ -1.26
PRPF4B-205ENST00000480058 MSH5O43196 834 aa7.2□□□□□ -1.26
PRPF4B-205ENST00000480058 KIF5CO60282 957 aa7.2□□□□□ -1.26
PRPF4B-205ENST00000480058 PLEKHG5O94827 1062 aa7.2□□□□□ -1.26
PRPF4B-205ENST00000480058 FGFR1OPO95684 399 aaKnown RBP7.2□□□□□ -1.26
PRPF4B-205ENST00000480058 FAM200AQ8TCP9 573 aa7.2□□□□□ -1.26
PRPF4B-205ENST00000480058 TNPO1Q92973 898 aaKnown RBP7.2□□□□□ -1.26
PRPF4B-205ENST00000480058 CCDC43Q96MW1 224 aaKnown RBP7.2□□□□□ -1.26
PRPF4B-205ENST00000480058 RPRD2Q5VT52 1461 aaKnown RBP7.2□□□□□ -1.26
PRPF4B-205ENST00000480058 BAG4O95429 457 aaKnown RBP7.2□□□□□ -1.26
PRPF4B-205ENST00000480058 TTLL5Q6EMB2 1281 aa7.2□□□□□ -1.26
PRPF4B-205ENST00000480058 ZNF644Q9H582 1327 aaPredicted RBP7.2□□□□□ -1.26
PRPF4B-205ENST00000480058 GOLGA6L10A0A0M3HER8 536 aa7.2□□□□□ -1.26
PRPF4B-205ENST00000480058 PAFAH1B1P43034 410 aa7.2□□□□□ -1.26
PRPF4B-205ENST00000480058 ATL3Q6DD88 541 aa7.2□□□□□ -1.26
PRPF4B-205ENST00000480058 LTV1Q96GA3 475 aaPredicted RBP7.2□□□□□ -1.26
PRPF4B-205ENST00000480058 EPS15P42566 896 aa7.19□□□□□ -1.26
PRPF4B-205ENST00000480058 NLRP6P59044 892 aa7.19□□□□□ -1.26
PRPF4B-205ENST00000480058 NEUROD6Q96NK8 337 aa7.19□□□□□ -1.26
PRPF4B-205ENST00000480058 NAA15Q9BXJ9 866 aaKnown RBP7.19□□□□□ -1.26
PRPF4B-205ENST00000480058 ARFGAP2Q8N6H7 521 aa7.19□□□□□ -1.26
PRPF4B-205ENST00000480058 TAF4BQ92750 862 aa7.19□□□□□ -1.26
PRPF4B-205ENST00000480058 G3V3G9 751 aa7.19□□□□□ -1.26
PRPF4B-205ENST00000480058 DCAF8Q5TAQ9 597 aa7.19□□□□□ -1.26
PRPF4B-205ENST00000480058 LUZP1Q86V48 1076 aa7.19□□□□□ -1.26
PRPF4B-205ENST00000480058 VPS36Q86VN1 386 aa7.19□□□□□ -1.26
PRPF4B-205ENST00000480058 GOLIM4O00461 696 aa7.19□□□□□ -1.26
PRPF4B-205ENST00000480058 VPS37DQ86XT2 251 aa7.19□□□□□ -1.26
PRPF4B-205ENST00000480058 DDX12PQ92771 950 aa7.19□□□□□ -1.26
PRPF4B-205ENST00000480058 SLC12A5Q9H2X9 1139 aa7.19□□□□□ -1.26
PRPF4B-205ENST00000480058 NUP160Q12769 1436 aa7.19□□□□□ -1.26
PRPF4B-205ENST00000480058 ZNF165P49910 485 aa7.19□□□□□ -1.26
PRPF4B-205ENST00000480058 TUBB2AQ13885 445 aa7.19□□□□□ -1.26
PRPF4B-205ENST00000480058 LRSAM1Q6UWE0 723 aa7.19□□□□□ -1.26
PRPF4B-205ENST00000480058 TIGD1Q96MW7 591 aa7.19□□□□□ -1.26
PRPF4B-205ENST00000480058 TUBB2BQ9BVA1 445 aa7.19□□□□□ -1.26
PRPF4B-205ENST00000480058 NPC1L1Q9UHC9 1359 aa7.18□□□□□ -1.26
PRPF4B-205ENST00000480058 SSH1Q8WYL5 1049 aa7.18□□□□□ -1.26
PRPF4B-205ENST00000480058 SYCE3A1L190 88 aa7.18□□□□□ -1.26
PRPF4B-205ENST00000480058 USO1O60763 962 aaKnown RBP7.18□□□□□ -1.26
PRPF4B-205ENST00000480058 CFAP100Q494V2 611 aa7.18□□□□□ -1.26
PRPF4B-205ENST00000480058 TNNT1P13805 278 aa7.18□□□□□ -1.26
PRPF4B-205ENST00000480058 SENP3Q9H4L4 574 aaPredicted RBP7.18□□□□□ -1.26
PRPF4B-205ENST00000480058 SRGAP3O43295 1099 aa7.18□□□□□ -1.26
PRPF4B-205ENST00000480058 ZNF397Q8NF99 534 aaPredicted RBP7.18□□□□□ -1.26
PRPF4B-205ENST00000480058 SYCP1Q15431 976 aa7.17□□□□□ -1.26
PRPF4B-205ENST00000480058 HSP90AB2PQ58FF8 381 aa7.17□□□□□ -1.26
PRPF4B-205ENST00000480058 JAKMIP1Q96N16 626 aaKnown RBP7.17□□□□□ -1.26
PRPF4B-205ENST00000480058 CDK5RAP3Q96JB5 506 aa7.17□□□□□ -1.26
PRPF4B-205ENST00000480058 TOP1P11387 765 aaKnown RBP7.17□□□□□ -1.26
PRPF4B-205ENST00000480058 XRCC6P12956 609 aaKnown RBP eCLIP7.17□□□□□ -1.26
PRPF4B-205ENST00000480058 RBM10P98175 930 aaKnown RBP7.17□□□□□ -1.26
PRPF4B-205ENST00000480058 TMEM57Q8N5G2 664 aa7.17□□□□□ -1.26
PRPF4B-205ENST00000480058 SMARCC1Q92922 1105 aaPredicted RBP7.17□□□□□ -1.26
PRPF4B-205ENST00000480058 ZNF287Q9HBT7 754 aa7.17□□□□□ -1.26
PRPF4B-205ENST00000480058 STX1AQ16623 288 aa7.17□□□□□ -1.26
PRPF4B-205ENST00000480058 RAB34Q9BZG1 259 aa7.17□□□□□ -1.26
PRPF4B-205ENST00000480058 ECHDC1Q9NTX5 307 aa7.17□□□□□ -1.26
PRPF4B-205ENST00000480058 HMOX1P09601 288 aa7.16□□□□□ -1.26
PRPF4B-205ENST00000480058 SMC1AQ14683 1233 aaKnown RBP7.16□□□□□ -1.26
PRPF4B-205ENST00000480058 LARP1Q6PKG0 1096 aaKnown RBP7.16□□□□□ -1.26
PRPF4B-205ENST00000480058 PODXL2Q9NZ53 605 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms