RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 CCDC7Q96M83 1385 aa14.85□□□□□ -0.03
SMURF1-204ENST00000480055 FAM208AQ9UK61 1670 aaKnown RBP14.84□□□□□ -0.03
SMURF1-204ENST00000480055 SYT17Q9BSW7 474 aa14.84□□□□□ -0.03
SMURF1-204ENST00000480055 MTFR1LQ9H019 292 aa14.84□□□□□ -0.03
SMURF1-204ENST00000480055 MAP3K5Q99683 1374 aa14.84□□□□□ -0.03
SMURF1-204ENST00000480055 KCNH5Q8NCM2 988 aa14.83□□□□□ -0.04
SMURF1-204ENST00000480055 SOX12O15370 315 aa14.82□□□□□ -0.04
SMURF1-204ENST00000480055 LY75O60449 1722 aa14.82□□□□□ -0.04
SMURF1-204ENST00000480055 TTC21BQ7Z4L5 1316 aa14.82□□□□□ -0.04
SMURF1-204ENST00000480055 CSB-PGBD3P0DP91 1061 aa14.81□□□□□ -0.04
SMURF1-204ENST00000480055 EVC2Q86UK5 1308 aa14.81□□□□□ -0.04
SMURF1-204ENST00000480055 TTC21AQ8NDW8 1320 aa14.81□□□□□ -0.04
SMURF1-204ENST00000480055 DOT1LQ8TEK3 1739 aa14.8□□□□□ -0.04
SMURF1-204ENST00000480055 EXOC5O00471 708 aa14.8□□□□□ -0.04
SMURF1-204ENST00000480055 SHANK3Q9BYB0 1731 aa14.8□□□□□ -0.04
SMURF1-204ENST00000480055 L3MBTL2Q969R5 705 aa14.78□□□□□ -0.04
SMURF1-204ENST00000480055 FARP1Q9Y4F1 1045 aaPredicted RBP14.78□□□□□ -0.04
SMURF1-204ENST00000480055 SENP3-EIF4A1A0A087X0R7 540 aa14.77□□□□□ -0.05
SMURF1-204ENST00000480055 ARXQ96QS3 562 aa14.77□□□□□ -0.05
SMURF1-204ENST00000480055 RGPD2P0DJD1 1756 aa14.77□□□□□ -0.05
SMURF1-204ENST00000480055 ERBB3P21860 1342 aa14.76□□□□□ -0.05
SMURF1-204ENST00000480055 C1QTNF8P60827 252 aa14.76□□□□□ -0.05
SMURF1-204ENST00000480055 NEUROD1Q13562 356 aa14.76□□□□□ -0.05
SMURF1-204ENST00000480055 USP31Q70CQ4 1352 aa14.75□□□□□ -0.05
SMURF1-204ENST00000480055 KTN1Q86UP2 1357 aaKnown RBP14.75□□□□□ -0.05
SMURF1-204ENST00000480055 ZNF827Q17R98 1081 aa14.75□□□□□ -0.05
SMURF1-204ENST00000480055 ACSBG1Q96GR2 724 aa14.75□□□□□ -0.05
SMURF1-204ENST00000480055 ROCK2O75116 1388 aaKnown RBP14.74□□□□□ -0.05
SMURF1-204ENST00000480055 SPOCK2Q92563 424 aa14.74□□□□□ -0.05
SMURF1-204ENST00000480055 CD163L1Q9NR16 1453 aa14.74□□□□□ -0.05
SMURF1-204ENST00000480055 SIN3AQ96ST3 1273 aa14.73□□□□□ -0.05
SMURF1-204ENST00000480055 TAF1LQ8IZX4 1826 aa14.72□□□□□ -0.05
SMURF1-204ENST00000480055 IL2RBP14784 551 aa14.72□□□□□ -0.05
SMURF1-204ENST00000480055 MNX1P50219 401 aaPredicted RBP14.72□□□□□ -0.05
SMURF1-204ENST00000480055 LRRC4BQ9NT99 713 aa14.72□□□□□ -0.05
SMURF1-204ENST00000480055 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.71□□□□□ -0.05
SMURF1-204ENST00000480055 SBNO2Q9Y2G9 1366 aa14.71□□□□□ -0.06
SMURF1-204ENST00000480055 C5P01031 1676 aa14.71□□□□□ -0.06
SMURF1-204ENST00000480055 NLRP2Q9NX02 1062 aa14.7□□□□□ -0.06
SMURF1-204ENST00000480055 GOLGB1Q14789 3259 aaKnown RBP14.69□□□□□ -0.06
SMURF1-204ENST00000480055 GPR162Q16538 588 aa14.69□□□□□ -0.06
SMURF1-204ENST00000480055 TMC1Q8TDI8 760 aa14.69□□□□□ -0.06
SMURF1-204ENST00000480055 SLC16A10Q8TF71 515 aa14.69□□□□□ -0.06
SMURF1-204ENST00000480055 PNPLA7Q6ZV29 1317 aa14.68□□□□□ -0.06
SMURF1-204ENST00000480055 SLC27A3Q5K4L6 730 aa14.68□□□□□ -0.06
SMURF1-204ENST00000480055 ANKRD24Q8TF21 1146 aa14.68□□□□□ -0.06
SMURF1-204ENST00000480055 EDC4Q6P2E9 1401 aaKnown RBP14.67□□□□□ -0.06
SMURF1-204ENST00000480055 GIGYF1O75420 1035 aaPredicted RBP14.67□□□□□ -0.06
SMURF1-204ENST00000480055 NME9Q86XW9 330 aa14.67□□□□□ -0.06
SMURF1-204ENST00000480055 POLD1P28340 1107 aa14.66□□□□□ -0.06
SMURF1-204ENST00000480055 NSD2O96028 1365 aa14.65□□□□□ -0.06
SMURF1-204ENST00000480055 HDGFL2Q7Z4V5 671 aaPredicted RBP14.65□□□□□ -0.06
SMURF1-204ENST00000480055 ITGB4P16144 1822 aa14.64□□□□□ -0.07
SMURF1-204ENST00000480055 ANKRD36BQ8N2N9 1353 aa14.64□□□□□ -0.07
SMURF1-204ENST00000480055 CARD11Q9BXL7 1154 aa14.64□□□□□ -0.07
SMURF1-204ENST00000480055 CEP350Q5VT06 3117 aa14.63□□□□□ -0.07
SMURF1-204ENST00000480055 POTEHQ6S545 545 aa14.63□□□□□ -0.07
SMURF1-204ENST00000480055 NLGN2Q8NFZ4 835 aa14.63□□□□□ -0.07
SMURF1-204ENST00000480055 UBR3Q6ZT12 1888 aa14.63□□□□□ -0.07
SMURF1-204ENST00000480055 A0A1W2PP64 1363 aa14.62□□□□□ -0.07
SMURF1-204ENST00000480055 IFFO2Q5TF58 517 aa14.62□□□□□ -0.07
SMURF1-204ENST00000480055 PELP1Q8IZL8 1130 aaKnown RBP14.62□□□□□ -0.07
SMURF1-204ENST00000480055 TOGARAM1Q9Y4F4 1720 aa14.62□□□□□ -0.07
SMURF1-204ENST00000480055 MEGF6O75095 1541 aa14.61□□□□□ -0.07
SMURF1-204ENST00000480055 TERF2IPQ9NYB0 399 aa14.61□□□□□ -0.07
SMURF1-204ENST00000480055 TFCP2L1Q9NZI6 479 aa14.61□□□□□ -0.07
SMURF1-204ENST00000480055 KIF20BQ96Q89 1820 aa14.6□□□□□ -0.07
SMURF1-204ENST00000480055 YBX3P16989 372 aaKnown RBP eCLIP14.6□□□□□ -0.07
SMURF1-204ENST00000480055 DDX54Q8TDD1 881 aaKnown RBP14.6□□□□□ -0.07
SMURF1-204ENST00000480055 IP6K1Q92551 441 aa14.6□□□□□ -0.07
SMURF1-204ENST00000480055 LTV1Q96GA3 475 aaPredicted RBP14.6□□□□□ -0.07
SMURF1-204ENST00000480055 SLC12A5Q9H2X9 1139 aa14.6□□□□□ -0.07
SMURF1-204ENST00000480055 KCNQ4P56696 695 aa14.59□□□□□ -0.07
SMURF1-204ENST00000480055 ATP10DQ9P241 1426 aa14.58□□□□□ -0.07
SMURF1-204ENST00000480055 C4BP0C0L5 1744 aa14.58□□□□□ -0.07
SMURF1-204ENST00000480055 GRIN3BO60391 1043 aa14.58□□□□□ -0.08
SMURF1-204ENST00000480055 PRIM1P49642 420 aaKnown RBP14.58□□□□□ -0.08
SMURF1-204ENST00000480055 NUBP1P53384 320 aa14.58□□□□□ -0.08
SMURF1-204ENST00000480055 PKD1L3Q7Z443 1732 aa14.58□□□□□ -0.08
SMURF1-204ENST00000480055 DCAF8Q5TAQ9 597 aa14.57□□□□□ -0.08
SMURF1-204ENST00000480055 SYTL4Q96C24 671 aaPredicted RBP14.57□□□□□ -0.08
SMURF1-204ENST00000480055 CCNL1Q9UK58 526 aaPredicted RBP14.57□□□□□ -0.08
SMURF1-204ENST00000480055 ADCY9O60503 1353 aa14.57□□□□□ -0.08
SMURF1-204ENST00000480055 FAM212AQ96EL1 285 aa14.56□□□□□ -0.08
SMURF1-204ENST00000480055 CIZ1Q9ULV3 898 aaPredicted RBP14.56□□□□□ -0.08
SMURF1-204ENST00000480055 MAP2P11137 1827 aaKnown RBP14.56□□□□□ -0.08
SMURF1-204ENST00000480055 COL23A1Q86Y22 540 aaPredicted RBP14.55□□□□□ -0.08
SMURF1-204ENST00000480055 MAP3K19Q56UN5 1328 aa14.55□□□□□ -0.08
SMURF1-204ENST00000480055 RTL1A6NKG5 1358 aa14.55□□□□□ -0.08
SMURF1-204ENST00000480055 USP47Q96K76 1375 aa14.55□□□□□ -0.08
SMURF1-204ENST00000480055 KIF13BQ9NQT8 1826 aa14.55□□□□□ -0.08
SMURF1-204ENST00000480055 HOXC9P31274 260 aa14.54□□□□□ -0.08
SMURF1-204ENST00000480055 AMPHP49418 695 aa14.54□□□□□ -0.08
SMURF1-204ENST00000480055 ZCRB1Q8TBF4 217 aaKnown RBP14.54□□□□□ -0.08
SMURF1-204ENST00000480055 COG3Q96JB2 828 aa14.54□□□□□ -0.08
SMURF1-204ENST00000480055 TONSLQ96HA7 1378 aa14.54□□□□□ -0.08
SMURF1-204ENST00000480055 CICQ96RK0 1608 aaPredicted RBP14.54□□□□□ -0.08
SMURF1-204ENST00000480055 KIAA1551Q9HCM1 1747 aa14.53□□□□□ -0.08
SMURF1-204ENST00000480055 HAX1O00165 279 aa14.53□□□□□ -0.08
SMURF1-204ENST00000480055 RASEFQ8IZ41 740 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms