RNA–Protein interactions for RNA: ENST00000480016.1

EFEMP1-211, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

TSL 2

Gene EFEMP1, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-211ENST00000480016 THRAP3Q9Y2W1 955 aaKnown RBP12.35□□□□□ -0.43
EFEMP1-211ENST00000480016 BCL9O00512 1426 aa12.35□□□□□ -0.43
EFEMP1-211ENST00000480016 VIRMAQ69YN4 1812 aaKnown RBP12.34□□□□□ -0.43
EFEMP1-211ENST00000480016 QSER1Q2KHR3 1735 aa12.34□□□□□ -0.43
EFEMP1-211ENST00000480016 IQGAP3Q86VI3 1631 aa12.34□□□□□ -0.43
EFEMP1-211ENST00000480016 EVA1CP58658 441 aa12.34□□□□□ -0.43
EFEMP1-211ENST00000480016 MARCH10Q8NA82 808 aaPredicted RBP12.34□□□□□ -0.43
EFEMP1-211ENST00000480016 KIF1AQ12756 1690 aa12.33□□□□□ -0.44
EFEMP1-211ENST00000480016 ATMINO43313 823 aaPredicted RBP12.33□□□□□ -0.44
EFEMP1-211ENST00000480016 SSH2Q76I76 1423 aa12.33□□□□□ -0.44
EFEMP1-211ENST00000480016 C9orf131Q5VYM1 1079 aa12.32□□□□□ -0.44
EFEMP1-211ENST00000480016 E9PCH4 1651 aa12.32□□□□□ -0.44
EFEMP1-211ENST00000480016 ADAMTS7Q9UKP4 1686 aa12.32□□□□□ -0.44
EFEMP1-211ENST00000480016 MEGF6O75095 1541 aa12.32□□□□□ -0.44
EFEMP1-211ENST00000480016 CACNA1AO00555 2505 aa12.31□□□□□ -0.44
EFEMP1-211ENST00000480016 PHF8Q9UPP1 1060 aa12.31□□□□□ -0.44
EFEMP1-211ENST00000480016 KIAA0232Q92628 1395 aa12.3□□□□□ -0.44
EFEMP1-211ENST00000480016 SZT2Q5T011 3432 aa12.3□□□□□ -0.44
EFEMP1-211ENST00000480016 PLEKHG2Q9H7P9 1386 aa12.3□□□□□ -0.44
EFEMP1-211ENST00000480016 NAIPQ13075 1403 aa12.29□□□□□ -0.44
EFEMP1-211ENST00000480016 TNRC6CQ9HCJ0 1690 aaKnown RBP12.29□□□□□ -0.44
EFEMP1-211ENST00000480016 MAP2K1Q02750 393 aaPredicted RBP12.29□□□□□ -0.44
EFEMP1-211ENST00000480016 DDB1Q16531 1140 aa12.29□□□□□ -0.44
EFEMP1-211ENST00000480016 ZNF326Q5BKZ1 582 aaKnown RBP12.29□□□□□ -0.44
EFEMP1-211ENST00000480016 DCAF8Q5TAQ9 597 aa12.29□□□□□ -0.44
EFEMP1-211ENST00000480016 ARHGAP27Q6ZUM4 889 aa12.29□□□□□ -0.44
EFEMP1-211ENST00000480016 TFCP2L1Q9NZI6 479 aa12.29□□□□□ -0.44
EFEMP1-211ENST00000480016 SLC24A1O60721 1099 aa12.28□□□□□ -0.44
EFEMP1-211ENST00000480016 MSL1Q68DK7 614 aa12.28□□□□□ -0.44
EFEMP1-211ENST00000480016 PCDHB13Q9Y5F0 798 aa12.28□□□□□ -0.44
EFEMP1-211ENST00000480016 NBPF15Q8N660 670 aa12.27□□□□□ -0.45
EFEMP1-211ENST00000480016 FMN2Q9NZ56 1722 aa12.27□□□□□ -0.45
EFEMP1-211ENST00000480016 BRD4O60885 1362 aaPredicted RBP12.27□□□□□ -0.45
EFEMP1-211ENST00000480016 VEGFAP15692 232 aaPredicted RBP12.26□□□□□ -0.45
EFEMP1-211ENST00000480016 TIE1P35590 1138 aa12.26□□□□□ -0.45
EFEMP1-211ENST00000480016 DGKZQ13574 1117 aa12.26□□□□□ -0.45
EFEMP1-211ENST00000480016 TRPC6Q9Y210 931 aa12.26□□□□□ -0.45
EFEMP1-211ENST00000480016 COL23A1Q86Y22 540 aaPredicted RBP12.25□□□□□ -0.45
EFEMP1-211ENST00000480016 SLC39A7Q92504 469 aa12.25□□□□□ -0.45
EFEMP1-211ENST00000480016 BMP2KQ9NSY1 1161 aaPredicted RBP12.25□□□□□ -0.45
EFEMP1-211ENST00000480016 TUBGCP6Q96RT7 1819 aa12.25□□□□□ -0.45
EFEMP1-211ENST00000480016 C7P10643 843 aa12.24□□□□□ -0.45
EFEMP1-211ENST00000480016 COL6A3P12111 3177 aa12.24□□□□□ -0.45
EFEMP1-211ENST00000480016 ATN1P54259 1190 aaPredicted RBP12.24□□□□□ -0.45
EFEMP1-211ENST00000480016 CRYBG1Q9Y4K1 1723 aa12.23□□□□□ -0.45
EFEMP1-211ENST00000480016 NRXN1Q9ULB1 1477 aa12.23□□□□□ -0.45
EFEMP1-211ENST00000480016 METRNQ9UJH8 293 aa12.23□□□□□ -0.45
EFEMP1-211ENST00000480016 LRRC37A3O60309 1634 aa12.22□□□□□ -0.45
EFEMP1-211ENST00000480016 ZC3H6P61129 1189 aaKnown RBP12.22□□□□□ -0.45
EFEMP1-211ENST00000480016 HIRIP3Q9BW71 556 aaPredicted RBP12.22□□□□□ -0.45
EFEMP1-211ENST00000480016 GSE1Q14687 1217 aa12.21□□□□□ -0.45
EFEMP1-211ENST00000480016 AMER1Q5JTC6 1135 aaPredicted RBP12.21□□□□□ -0.45
EFEMP1-211ENST00000480016 IFNLR1Q8IU57 520 aaPredicted RBP12.21□□□□□ -0.45
EFEMP1-211ENST00000480016 COL25A1Q9BXS0 654 aaPredicted RBP12.21□□□□□ -0.45
EFEMP1-211ENST00000480016 CASP8AP2Q9UKL3 1982 aa12.21□□□□□ -0.46
EFEMP1-211ENST00000480016 PKD1L3Q7Z443 1732 aa12.2□□□□□ -0.46
EFEMP1-211ENST00000480016 ALS2Q96Q42 1657 aa12.2□□□□□ -0.46
EFEMP1-211ENST00000480016 VGFO15240 615 aaPredicted RBP12.2□□□□□ -0.46
EFEMP1-211ENST00000480016 IFNL1Q8IU54 200 aa12.2□□□□□ -0.46
EFEMP1-211ENST00000480016 TSKSQ9UJT2 592 aa12.2□□□□□ -0.46
EFEMP1-211ENST00000480016 BCS1LQ9Y276 419 aa12.2□□□□□ -0.46
EFEMP1-211ENST00000480016 RGPD8O14715 1765 aaPredicted RBP12.2□□□□□ -0.46
EFEMP1-211ENST00000480016 WAPLQ7Z5K2 1190 aa12.19□□□□□ -0.46
EFEMP1-211ENST00000480016 ACIN1Q9UKV3 1341 aaKnown RBP12.18□□□□□ -0.46
EFEMP1-211ENST00000480016 TRPM3Q9HCF6 1732 aaPredicted RBP12.18□□□□□ -0.46
EFEMP1-211ENST00000480016 TTLL13PA6NNM8 815 aa12.18□□□□□ -0.46
EFEMP1-211ENST00000480016 POTECB2RU33 542 aa12.18□□□□□ -0.46
EFEMP1-211ENST00000480016 PYGBP11216 843 aa12.18□□□□□ -0.46
EFEMP1-211ENST00000480016 KIF1BO60333 1816 aa12.18□□□□□ -0.46
EFEMP1-211ENST00000480016 RPGRIP1LQ68CZ1 1315 aa12.17□□□□□ -0.46
EFEMP1-211ENST00000480016 WDR33Q9C0J8 1336 aaKnown RBP12.17□□□□□ -0.46
EFEMP1-211ENST00000480016 PRR36Q9H6K5 1346 aa12.17□□□□□ -0.46
EFEMP1-211ENST00000480016 POTEB2H3BUK9 544 aa12.17□□□□□ -0.46
EFEMP1-211ENST00000480016 SPOCK2Q92563 424 aa12.17□□□□□ -0.46
EFEMP1-211ENST00000480016 SNX27Q96L92 541 aa12.17□□□□□ -0.46
EFEMP1-211ENST00000480016 PRDM6Q9NQX0 595 aa12.17□□□□□ -0.46
EFEMP1-211ENST00000480016 RNF181Q9P0P0 153 aa12.17□□□□□ -0.46
EFEMP1-211ENST00000480016 CLTCL1P53675 1640 aa12.16□□□□□ -0.46
EFEMP1-211ENST00000480016 KCNQ4P56696 695 aa12.16□□□□□ -0.46
EFEMP1-211ENST00000480016 SLC27A3Q5K4L6 730 aa12.16□□□□□ -0.46
EFEMP1-211ENST00000480016 PASKQ96RG2 1323 aa12.15□□□□□ -0.46
EFEMP1-211ENST00000480016 RASSF10A6NK89 507 aa12.15□□□□□ -0.46
EFEMP1-211ENST00000480016 DEFB115Q30KQ5 88 aa12.15□□□□□ -0.46
EFEMP1-211ENST00000480016 ACSBG1Q96GR2 724 aa12.15□□□□□ -0.46
EFEMP1-211ENST00000480016 TMEM88BA6NKF7 163 aa12.14□□□□□ -0.47
EFEMP1-211ENST00000480016 BEGAINQ9BUH8 593 aa12.14□□□□□ -0.47
EFEMP1-211ENST00000480016 GLTPD2A6NH11 291 aa12.13□□□□□ -0.47
EFEMP1-211ENST00000480016 AKAP12Q02952 1782 aa12.13□□□□□ -0.47
EFEMP1-211ENST00000480016 TRIOBPQ9H2D6 2365 aa12.12□□□□□ -0.47
EFEMP1-211ENST00000480016 COL9A1P20849 921 aa12.12□□□□□ -0.47
EFEMP1-211ENST00000480016 COLQQ9Y215 455 aaPredicted RBP12.12□□□□□ -0.47
EFEMP1-211ENST00000480016 NHSQ6T4R5 1651 aa12.12□□□□□ -0.47
EFEMP1-211ENST00000480016 CRB1P82279 1406 aa12.11□□□□□ -0.47
EFEMP1-211ENST00000480016 USP6P35125 1406 aa12.11□□□□□ -0.47
EFEMP1-211ENST00000480016 ANKRD30BQ9BXX2 1392 aa12.1□□□□□ -0.47
EFEMP1-211ENST00000480016 CHRM1P11229 460 aaPredicted RBP12.1□□□□□ -0.47
EFEMP1-211ENST00000480016 PLA2G5P39877 138 aa12.1□□□□□ -0.47
EFEMP1-211ENST00000480016 TMEM106CQ9BVX2 250 aa12.1□□□□□ -0.47
EFEMP1-211ENST00000480016 TRIM35Q9UPQ4 493 aa12.1□□□□□ -0.47
EFEMP1-211ENST00000480016 SPATA31E1Q6ZUB1 1445 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms