RNA–Protein interactions for RNA: ENST00000479958.6

COMMD3-212, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-212ENST00000479958 POM121Q96HA1 1249 aa11.13□□□□□ -0.63
COMMD3-212ENST00000479958 CTSOP43234 321 aaPredicted RBP11.12□□□□□ -0.63
COMMD3-212ENST00000479958 PHTF2Q8N3S3 785 aa11.12□□□□□ -0.63
COMMD3-212ENST00000479958 CCDC85AQ96PX6 553 aaPredicted RBP11.12□□□□□ -0.63
COMMD3-212ENST00000479958 KDF1Q8NAX2 398 aaPredicted RBP11.11□□□□□ -0.63
COMMD3-212ENST00000479958 DOLKQ9UPQ8 538 aa11.11□□□□□ -0.63
COMMD3-212ENST00000479958 MAP7D1Q3KQU3 841 aa11.1□□□□□ -0.63
COMMD3-212ENST00000479958 NLRP3Q96P20 1036 aa11.1□□□□□ -0.63
COMMD3-212ENST00000479958 A0A1W2PRU2 124 aa11.09□□□□□ -0.63
COMMD3-212ENST00000479958 MEN1O00255 615 aa11.09□□□□□ -0.63
COMMD3-212ENST00000479958 SCTRP47872 440 aa11.09□□□□□ -0.63
COMMD3-212ENST00000479958 IRF7Q92985 503 aa11.09□□□□□ -0.63
COMMD3-212ENST00000479958 CDCA7Q9BWT1 371 aaPredicted RBP11.09□□□□□ -0.63
COMMD3-212ENST00000479958 OSBPL3Q9H4L5 887 aa11.09□□□□□ -0.63
COMMD3-212ENST00000479958 H3BM21 787 aa11.08□□□□□ -0.64
COMMD3-212ENST00000479958 TRAK2O60296 914 aa11.08□□□□□ -0.64
COMMD3-212ENST00000479958 GNRH1P01148 92 aa11.08□□□□□ -0.64
COMMD3-212ENST00000479958 GPC1P35052 558 aa11.08□□□□□ -0.64
COMMD3-212ENST00000479958 RNF144AP50876 292 aaPredicted RBP11.08□□□□□ -0.64
COMMD3-212ENST00000479958 LYSMD3Q7Z3D4 306 aa11.07□□□□□ -0.64
COMMD3-212ENST00000479958 RNF217Q8TC41 542 aa11.07□□□□□ -0.64
COMMD3-212ENST00000479958 ALG2Q9H553 416 aa11.07□□□□□ -0.64
COMMD3-212ENST00000479958 CHIC2Q9UKJ5 165 aa11.07□□□□□ -0.64
COMMD3-212ENST00000479958 VEGFBP49765 207 aa11.06□□□□□ -0.64
COMMD3-212ENST00000479958 PTSQ03393 145 aa11.06□□□□□ -0.64
COMMD3-212ENST00000479958 TSGA10IPQ3SY00 556 aa11.06□□□□□ -0.64
COMMD3-212ENST00000479958 PPFIA3O75145 1194 aa11.05□□□□□ -0.64
COMMD3-212ENST00000479958 CLN3Q13286 438 aa11.05□□□□□ -0.64
COMMD3-212ENST00000479958 OXLD1Q5BKU9 147 aa11.05□□□□□ -0.64
COMMD3-212ENST00000479958 LCE2AQ5TA79 106 aaPredicted RBP11.05□□□□□ -0.64
COMMD3-212ENST00000479958 ESCO1Q5FWF5 840 aa11.04□□□□□ -0.64
COMMD3-212ENST00000479958 SLC27A3Q5K4L6 730 aa11.04□□□□□ -0.64
COMMD3-212ENST00000479958 PLPP7Q8NBV4 271 aa11.04□□□□□ -0.64
COMMD3-212ENST00000479958 LZTS3O60299 673 aaPredicted RBP11.03□□□□□ -0.64
COMMD3-212ENST00000479958 FOXD4L5Q5VV16 416 aaPredicted RBP11.03□□□□□ -0.64
COMMD3-212ENST00000479958 PRICKLE2Q7Z3G6 844 aa11.02□□□□□ -0.64
COMMD3-212ENST00000479958 CLUAP1Q96AJ1 413 aa11.02□□□□□ -0.64
COMMD3-212ENST00000479958 ARHGEF10LQ9HCE6 1279 aa11.02□□□□□ -0.64
COMMD3-212ENST00000479958 SKIP12755 728 aa11.01□□□□□ -0.65
COMMD3-212ENST00000479958 HDGFL1Q5TGJ6 251 aa11.01□□□□□ -0.65
COMMD3-212ENST00000479958 PROSER2Q86WR7 435 aaPredicted RBP11.01□□□□□ -0.65
COMMD3-212ENST00000479958 CCDC155Q8N6L0 562 aa11.01□□□□□ -0.65
COMMD3-212ENST00000479958 NFATC2IPQ8NCF5 419 aa11.01□□□□□ -0.65
COMMD3-212ENST00000479958 ESYT1Q9BSJ8 1104 aa11.01□□□□□ -0.65
COMMD3-212ENST00000479958 SLC35F4A4IF30 521 aa11.01□□□□□ -0.65
COMMD3-212ENST00000479958 GTF2E1P29083 439 aaPredicted RBP11.01□□□□□ -0.65
COMMD3-212ENST00000479958 CNKSR1Q969H4 720 aa11.01□□□□□ -0.65
COMMD3-212ENST00000479958 A6NJR5 290 aa11□□□□□ -0.65
COMMD3-212ENST00000479958 WIPF1O43516 503 aa10.99□□□□□ -0.65
COMMD3-212ENST00000479958 EML3Q32P44 896 aa10.99□□□□□ -0.65
COMMD3-212ENST00000479958 XAGE2Q96GT9 111 aa10.99□□□□□ -0.65
COMMD3-212ENST00000479958 GRIP2Q9C0E4 1043 aa10.99□□□□□ -0.65
COMMD3-212ENST00000479958 POM121CA8CG34 1229 aa10.98□□□□□ -0.65
COMMD3-212ENST00000479958 RAB6BQ9NRW1 208 aa10.98□□□□□ -0.65
COMMD3-212ENST00000479958 INSM1Q01101 510 aaPredicted RBP10.97□□□□□ -0.65
COMMD3-212ENST00000479958 CENPCQ03188 943 aa10.97□□□□□ -0.65
COMMD3-212ENST00000479958 NOD1Q9Y239 953 aa10.97□□□□□ -0.65
COMMD3-212ENST00000479958 PIK3CDO00329 1044 aa10.96□□□□□ -0.65
COMMD3-212ENST00000479958 WDR44Q5JSH3 913 aa10.96□□□□□ -0.65
COMMD3-212ENST00000479958 FNBP4Q8N3X1 1017 aaPredicted RBP10.96□□□□□ -0.65
COMMD3-212ENST00000479958 IL2RAP01589 272 aa10.95□□□□□ -0.66
COMMD3-212ENST00000479958 VSIG8P0DPA2 414 aa10.95□□□□□ -0.66
COMMD3-212ENST00000479958 RHOQP17081 205 aa10.95□□□□□ -0.66
COMMD3-212ENST00000479958 GMPRP36959 345 aa10.95□□□□□ -0.66
COMMD3-212ENST00000479958 POU4F2Q12837 409 aa10.95□□□□□ -0.66
COMMD3-212ENST00000479958 ERBB4Q15303 1308 aa10.95□□□□□ -0.66
COMMD3-212ENST00000479958 ZSCAN10Q96SZ4 725 aaPredicted RBP10.95□□□□□ -0.66
COMMD3-212ENST00000479958 ITGA6P23229 1130 aa10.94□□□□□ -0.66
COMMD3-212ENST00000479958 SPATA31C2B4DYI2 1134 aa10.93□□□□□ -0.66
COMMD3-212ENST00000479958 TMEM214Q6NUQ4 689 aaKnown RBP10.93□□□□□ -0.66
COMMD3-212ENST00000479958 TAS1R3Q7RTX0 852 aa10.93□□□□□ -0.66
COMMD3-212ENST00000479958 NANOS1Q8WY41 292 aaKnown RBP10.93□□□□□ -0.66
COMMD3-212ENST00000479958 GNASQ5JWF2 1037 aa10.92□□□□□ -0.66
COMMD3-212ENST00000479958 NBPF10Q6P3W6 841 aaKnown RBP10.92□□□□□ -0.66
COMMD3-212ENST00000479958 SV2AQ7L0J3 742 aa10.92□□□□□ -0.66
COMMD3-212ENST00000479958 NBPF15Q8N660 670 aa10.92□□□□□ -0.66
COMMD3-212ENST00000479958 NCOA4Q13772 614 aa10.92□□□□□ -0.66
COMMD3-212ENST00000479958 ADAMTS19Q8TE59 1207 aa10.92□□□□□ -0.66
COMMD3-212ENST00000479958 ETNK1Q9HBU6 452 aa10.92□□□□□ -0.66
COMMD3-212ENST00000479958 DYRK1BQ9Y463 629 aa10.92□□□□□ -0.66
COMMD3-212ENST00000479958 SENP3-EIF4A1A0A087X0R7 540 aa10.91□□□□□ -0.66
COMMD3-212ENST00000479958 USP17L5A8MUK1 530 aa10.91□□□□□ -0.66
COMMD3-212ENST00000479958 INHAP05111 366 aa10.91□□□□□ -0.66
COMMD3-212ENST00000479958 GDF10P55107 478 aa10.91□□□□□ -0.66
COMMD3-212ENST00000479958 LCE2CQ5TA81 110 aa10.91□□□□□ -0.66
COMMD3-212ENST00000479958 TRIM50Q86XT4 487 aa10.91□□□□□ -0.66
COMMD3-212ENST00000479958 VWA5B2Q8N398 1253 aa10.91□□□□□ -0.66
COMMD3-212ENST00000479958 GMCL1Q96IK5 515 aa10.91□□□□□ -0.66
COMMD3-212ENST00000479958 CALR3Q96L12 384 aaKnown RBP10.91□□□□□ -0.66
COMMD3-212ENST00000479958 TIMMDC1Q9NPL8 285 aa10.91□□□□□ -0.66
COMMD3-212ENST00000479958 HRH3Q9Y5N1 445 aa10.91□□□□□ -0.66
COMMD3-212ENST00000479958 CDC14CA4D256 554 aa10.9□□□□□ -0.66
COMMD3-212ENST00000479958 WASLO00401 505 aaPredicted RBP10.9□□□□□ -0.66
COMMD3-212ENST00000479958 GLMNQ92990 594 aa10.9□□□□□ -0.66
COMMD3-212ENST00000479958 H7C1W4 665 aa10.89□□□□□ -0.67
COMMD3-212ENST00000479958 ATP9BO43861 1147 aa10.89□□□□□ -0.67
COMMD3-212ENST00000479958 PSME1Q06323 249 aa10.89□□□□□ -0.67
COMMD3-212ENST00000479958 TLR1Q15399 786 aa10.89□□□□□ -0.67
COMMD3-212ENST00000479958 RIPOR1Q6ZS17 1223 aa10.89□□□□□ -0.67
COMMD3-212ENST00000479958 DEPDC4Q8N2C3 294 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms