RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 HRO43593 1189 aa11.59□□□□□ -0.55
GAPVD1-217ENST00000479511 VAMP1P23763 118 aa11.59□□□□□ -0.55
GAPVD1-217ENST00000479511 SH3RF1Q7Z6J0 888 aa11.59□□□□□ -0.55
GAPVD1-217ENST00000479511 MAGEB6P1A0A0J9YX57 407 aa11.58□□□□□ -0.56
GAPVD1-217ENST00000479511 C21orf2O43822 256 aa11.58□□□□□ -0.56
GAPVD1-217ENST00000479511 MAPK1P28482 360 aa11.58□□□□□ -0.56
GAPVD1-217ENST00000479511 MTMR3Q13615 1198 aa11.58□□□□□ -0.56
GAPVD1-217ENST00000479511 PURBQ96QR8 312 aaKnown RBP11.58□□□□□ -0.56
GAPVD1-217ENST00000479511 MKNK1Q9BUB5 465 aa11.58□□□□□ -0.56
GAPVD1-217ENST00000479511 ARHGAP4P98171 946 aa11.57□□□□□ -0.56
GAPVD1-217ENST00000479511 PSME1Q06323 249 aa11.57□□□□□ -0.56
GAPVD1-217ENST00000479511 GAS2L2Q8NHY3 880 aa11.57□□□□□ -0.56
GAPVD1-217ENST00000479511 RNF166Q96A37 237 aaPredicted RBP11.57□□□□□ -0.56
GAPVD1-217ENST00000479511 ASB16Q96NS5 453 aa11.57□□□□□ -0.56
GAPVD1-217ENST00000479511 RBM19Q9Y4C8 960 aaKnown RBP11.57□□□□□ -0.56
GAPVD1-217ENST00000479511 ABCC9O60706 1549 aa11.56□□□□□ -0.56
GAPVD1-217ENST00000479511 LSM11P83369 360 aaKnown RBP eCLIP11.56□□□□□ -0.56
GAPVD1-217ENST00000479511 ERFEQ4G0M1 354 aa11.56□□□□□ -0.56
GAPVD1-217ENST00000479511 HINFPQ9BQA5 517 aa11.56□□□□□ -0.56
GAPVD1-217ENST00000479511 DCTN4Q9UJW0 460 aa11.56□□□□□ -0.56
GAPVD1-217ENST00000479511 WEE1P30291 646 aa11.55□□□□□ -0.56
GAPVD1-217ENST00000479511 COPS2P61201 443 aa11.55□□□□□ -0.56
GAPVD1-217ENST00000479511 FKBP5Q13451 457 aaPredicted RBP11.55□□□□□ -0.56
GAPVD1-217ENST00000479511 CCDC24Q8N4L8 307 aa11.55□□□□□ -0.56
GAPVD1-217ENST00000479511 TLL1O43897 1013 aa11.54□□□□□ -0.56
GAPVD1-217ENST00000479511 RECKO95980 971 aa11.54□□□□□ -0.56
GAPVD1-217ENST00000479511 FKBP4Q02790 459 aaKnown RBP eCLIP11.54□□□□□ -0.56
GAPVD1-217ENST00000479511 C4orf48Q5BLP8 95 aa11.54□□□□□ -0.56
GAPVD1-217ENST00000479511 TSEN2Q8NCE0 465 aaKnown RBP11.54□□□□□ -0.56
GAPVD1-217ENST00000479511 FOXJ1Q92949 421 aa11.54□□□□□ -0.56
GAPVD1-217ENST00000479511 GOLGA8CPA6NN73 597 aa11.53□□□□□ -0.56
GAPVD1-217ENST00000479511 WBP1LQ9NX94 342 aa11.53□□□□□ -0.56
GAPVD1-217ENST00000479511 BAP1Q92560 729 aa11.52□□□□□ -0.57
GAPVD1-217ENST00000479511 PCDHB11Q9Y5F2 797 aa11.52□□□□□ -0.57
GAPVD1-217ENST00000479511 ESPNB1AK53 854 aa11.51□□□□□ -0.57
GAPVD1-217ENST00000479511 RNF20Q5VTR2 975 aa11.51□□□□□ -0.57
GAPVD1-217ENST00000479511 USP4Q13107 963 aa11.5□□□□□ -0.57
GAPVD1-217ENST00000479511 SF3B2Q13435 895 aaKnown RBP11.5□□□□□ -0.57
GAPVD1-217ENST00000479511 LINC01559Q495D7 138 aa11.5□□□□□ -0.57
GAPVD1-217ENST00000479511 C8orf37Q96NL8 207 aa11.5□□□□□ -0.57
GAPVD1-217ENST00000479511 ZSCAN29Q8IWY8 852 aaPredicted RBP11.49□□□□□ -0.57
GAPVD1-217ENST00000479511 WNT2BQ93097 391 aa11.49□□□□□ -0.57
GAPVD1-217ENST00000479511 ADH1BP00325 375 aa11.48□□□□□ -0.57
GAPVD1-217ENST00000479511 NAA30Q147X3 362 aaPredicted RBP11.48□□□□□ -0.57
GAPVD1-217ENST00000479511 BPHLQ86WA6 291 aaPredicted RBP11.48□□□□□ -0.57
GAPVD1-217ENST00000479511 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.48□□□□□ -0.57
GAPVD1-217ENST00000479511 M0R2N6 131 aa11.47□□□□□ -0.57
GAPVD1-217ENST00000479511 COL19A1Q14993 1142 aa11.47□□□□□ -0.57
GAPVD1-217ENST00000479511 AGERQ15109 404 aa11.47□□□□□ -0.57
GAPVD1-217ENST00000479511 RGL4Q8IZJ4 473 aa11.47□□□□□ -0.57
GAPVD1-217ENST00000479511 SLC10A4Q96EP9 437 aa11.47□□□□□ -0.57
GAPVD1-217ENST00000479511 TSNAXIP1Q2TAA8 658 aa11.46□□□□□ -0.57
GAPVD1-217ENST00000479511 C1QTNF2Q9BXJ5 285 aa11.46□□□□□ -0.57
GAPVD1-217ENST00000479511 ZNF358Q9NW07 568 aa11.46□□□□□ -0.57
GAPVD1-217ENST00000479511 PTCD1O75127 700 aaKnown RBP11.45□□□□□ -0.58
GAPVD1-217ENST00000479511 NBPF20Q3BBV1 942 aa11.45□□□□□ -0.58
GAPVD1-217ENST00000479511 EAPPQ56P03 285 aaPredicted RBP11.45□□□□□ -0.58
GAPVD1-217ENST00000479511 ZNF511Q8NB15 262 aa11.45□□□□□ -0.58
GAPVD1-217ENST00000479511 HELQQ8TDG4 1101 aa11.45□□□□□ -0.58
GAPVD1-217ENST00000479511 SREK1Q8WXA9 508 aaKnown RBP11.45□□□□□ -0.58
GAPVD1-217ENST00000479511 ZPR1O75312 459 aa11.44□□□□□ -0.58
GAPVD1-217ENST00000479511 P4HBP07237 508 aaKnown RBP11.44□□□□□ -0.58
GAPVD1-217ENST00000479511 DRC1Q96MC2 740 aa11.44□□□□□ -0.58
GAPVD1-217ENST00000479511 STAC3Q96MF2 364 aa11.44□□□□□ -0.58
GAPVD1-217ENST00000479511 ZC3H6P61129 1189 aaKnown RBP11.43□□□□□ -0.58
GAPVD1-217ENST00000479511 FAM177A1Q8N128 213 aaPredicted RBP11.43□□□□□ -0.58
GAPVD1-217ENST00000479511 COL26A1Q96A83 441 aa11.43□□□□□ -0.58
GAPVD1-217ENST00000479511 TMEM229AB2RXF0 380 aa11.42□□□□□ -0.58
GAPVD1-217ENST00000479511 NPR3P17342 541 aa11.42□□□□□ -0.58
GAPVD1-217ENST00000479511 SCTRP47872 440 aa11.42□□□□□ -0.58
GAPVD1-217ENST00000479511 TMC7Q7Z402 723 aa11.42□□□□□ -0.58
GAPVD1-217ENST00000479511 PUS7Q96PZ0 661 aaKnown RBP11.42□□□□□ -0.58
GAPVD1-217ENST00000479511 IGFBP4P22692 258 aa11.41□□□□□ -0.58
GAPVD1-217ENST00000479511 RAB15P59190 212 aa11.41□□□□□ -0.58
GAPVD1-217ENST00000479511 MRPL58Q14197 206 aaKnown RBP11.41□□□□□ -0.58
GAPVD1-217ENST00000479511 SEPT12Q8IYM1 358 aa11.41□□□□□ -0.58
GAPVD1-217ENST00000479511 BACH2Q9BYV9 841 aa11.41□□□□□ -0.58
GAPVD1-217ENST00000479511 STAU1O95793 577 aaKnown RBP11.4□□□□□ -0.58
GAPVD1-217ENST00000479511 NAALADL2Q58DX5 795 aa11.4□□□□□ -0.58
GAPVD1-217ENST00000479511 LDLRAD1Q5T700 205 aa11.4□□□□□ -0.58
GAPVD1-217ENST00000479511 TRMT44Q8IYL2 757 aaKnown RBP11.4□□□□□ -0.58
GAPVD1-217ENST00000479511 RBCK1Q9BYM8 510 aa11.4□□□□□ -0.58
GAPVD1-217ENST00000479511 SLC6A16Q9GZN6 736 aa11.4□□□□□ -0.58
GAPVD1-217ENST00000479511 FAM13AO94988 1023 aa11.38□□□□□ -0.59
GAPVD1-217ENST00000479511 MYCP01106 439 aaPredicted RBP11.38□□□□□ -0.59
GAPVD1-217ENST00000479511 MPSTP25325 297 aa11.38□□□□□ -0.59
GAPVD1-217ENST00000479511 SH3BP2P78314 561 aa11.38□□□□□ -0.59
GAPVD1-217ENST00000479511 TNS4Q8IZW8 715 aa11.38□□□□□ -0.59
GAPVD1-217ENST00000479511 SCG3Q8WXD2 468 aaKnown RBP11.38□□□□□ -0.59
GAPVD1-217ENST00000479511 SAP130Q9H0E3 1048 aa11.38□□□□□ -0.59
GAPVD1-217ENST00000479511 FOXO3O43524 673 aa11.37□□□□□ -0.59
GAPVD1-217ENST00000479511 HDLBPQ00341 1268 aaKnown RBP11.37□□□□□ -0.59
GAPVD1-217ENST00000479511 C9orf131Q5VYM1 1079 aa11.37□□□□□ -0.59
GAPVD1-217ENST00000479511 ZNF516Q92618 1163 aa11.37□□□□□ -0.59
GAPVD1-217ENST00000479511 MTRQ99707 1265 aa11.37□□□□□ -0.59
GAPVD1-217ENST00000479511 HSP90B1P14625 803 aaKnown RBP11.36□□□□□ -0.59
GAPVD1-217ENST00000479511 SCNN1DP51172 638 aa11.36□□□□□ -0.59
GAPVD1-217ENST00000479511 FMR1Q06787 632 aaKnown RBP eCLIP11.36□□□□□ -0.59
GAPVD1-217ENST00000479511 CCDC125Q86Z20 511 aa11.36□□□□□ -0.59
GAPVD1-217ENST00000479511 KCTD15Q96SI1 283 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms