RNA–Protein interactions for RNA: ENST00000479485.5

SSR1-207, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 2

Gene SSR1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-207ENST00000479485 WDR4P57081 412 aaKnown RBP8.75□□□□□ -1.01
SSR1-207ENST00000479485 SCARF2Q96GP6 870 aaPredicted RBP8.75□□□□□ -1.01
SSR1-207ENST00000479485 KLF16Q9BXK1 252 aaPredicted RBP8.75□□□□□ -1.01
SSR1-207ENST00000479485 KRTAP9-9Q9BYP9 154 aa8.75□□□□□ -1.01
SSR1-207ENST00000479485 KRTAP9-4Q9BYQ2 154 aa8.75□□□□□ -1.01
SSR1-207ENST00000479485 SEMA3FQ13275 785 aa8.74□□□□□ -1.01
SSR1-207ENST00000479485 C6orf118Q5T5N4 469 aa8.74□□□□□ -1.01
SSR1-207ENST00000479485 DZIP3Q86Y13 1208 aaKnown RBP8.74□□□□□ -1.01
SSR1-207ENST00000479485 TRMT44Q8IYL2 757 aaKnown RBP8.74□□□□□ -1.01
SSR1-207ENST00000479485 FAM174AQ8TBP5 190 aa8.74□□□□□ -1.01
SSR1-207ENST00000479485 CALR3Q96L12 384 aaKnown RBP8.74□□□□□ -1.01
SSR1-207ENST00000479485 ALG2Q9H553 416 aa8.74□□□□□ -1.01
SSR1-207ENST00000479485 SLURP2P0DP57 97 aa8.73□□□□□ -1.01
SSR1-207ENST00000479485 HDGFL1Q5TGJ6 251 aa8.73□□□□□ -1.01
SSR1-207ENST00000479485 K7ELQ4 463 aaPredicted RBP8.72□□□□□ -1.01
SSR1-207ENST00000479485 ZNF592Q92610 1267 aa8.72□□□□□ -1.01
SSR1-207ENST00000479485 ADH1CP00326 375 aa8.71□□□□□ -1.02
SSR1-207ENST00000479485 ARID5BQ14865 1188 aa8.7□□□□□ -1.02
SSR1-207ENST00000479485 NBPF20Q3BBV1 942 aa8.7□□□□□ -1.02
SSR1-207ENST00000479485 CCDC82Q8N4S0 544 aa8.7□□□□□ -1.02
SSR1-207ENST00000479485 DCAF5Q96JK2 942 aa8.7□□□□□ -1.02
SSR1-207ENST00000479485 UCN2Q96RP3 112 aa8.7□□□□□ -1.02
SSR1-207ENST00000479485 DNMT3LQ9UJW3 386 aa8.7□□□□□ -1.02
SSR1-207ENST00000479485 MCCD1P59942 119 aaPredicted RBP8.69□□□□□ -1.02
SSR1-207ENST00000479485 VASH1Q7L8A9 365 aaPredicted RBP8.69□□□□□ -1.02
SSR1-207ENST00000479485 CDV3Q9UKY7 258 aaKnown RBP8.69□□□□□ -1.02
SSR1-207ENST00000479485 MAP4K5Q9Y4K4 846 aa8.69□□□□□ -1.02
SSR1-207ENST00000479485 FSHRP23945 695 aa8.68□□□□□ -1.02
SSR1-207ENST00000479485 CCDC97Q96F63 343 aaPredicted RBP8.68□□□□□ -1.02
SSR1-207ENST00000479485 ZFAND3Q9H8U3 227 aa8.68□□□□□ -1.02
SSR1-207ENST00000479485 CEP126Q9P2H0 1117 aa8.68□□□□□ -1.02
SSR1-207ENST00000479485 PIK3CDO00329 1044 aa8.67□□□□□ -1.02
SSR1-207ENST00000479485 GIGYF1O75420 1035 aaPredicted RBP8.67□□□□□ -1.02
SSR1-207ENST00000479485 KCTD15Q96SI1 283 aaPredicted RBP8.67□□□□□ -1.02
SSR1-207ENST00000479485 ARID3AQ99856 593 aa8.67□□□□□ -1.02
SSR1-207ENST00000479485 SOS2Q07890 1332 aaPredicted RBP8.66□□□□□ -1.02
SSR1-207ENST00000479485 RAB15P59190 212 aa8.66□□□□□ -1.02
SSR1-207ENST00000479485 SLFNL1Q499Z3 407 aa8.66□□□□□ -1.02
SSR1-207ENST00000479485 LYPD4Q6UWN0 246 aa8.66□□□□□ -1.02
SSR1-207ENST00000479485 GALNT6Q8NCL4 622 aa8.66□□□□□ -1.02
SSR1-207ENST00000479485 NANOS1Q8WY41 292 aaKnown RBP8.66□□□□□ -1.02
SSR1-207ENST00000479485 CDK15Q96Q40 435 aa8.66□□□□□ -1.02
SSR1-207ENST00000479485 KRTAP4-8A0A0G2JLE6 195 aa8.65□□□□□ -1.02
SSR1-207ENST00000479485 ESPNB1AK53 854 aa8.65□□□□□ -1.02
SSR1-207ENST00000479485 INTS6LQ5JSJ4 861 aaKnown RBP8.65□□□□□ -1.02
SSR1-207ENST00000479485 RNF135Q8IUD6 432 aa8.65□□□□□ -1.02
SSR1-207ENST00000479485 MPNDQ8N594 471 aa8.65□□□□□ -1.02
SSR1-207ENST00000479485 SERPINA10Q9UK55 444 aa8.64□□□□□ -1.03
SSR1-207ENST00000479485 ZIC2O95409 532 aaPredicted RBP8.63□□□□□ -1.03
SSR1-207ENST00000479485 BMP2P12643 396 aa8.63□□□□□ -1.03
SSR1-207ENST00000479485 TBC1D9Q6ZT07 1266 aa8.63□□□□□ -1.03
SSR1-207ENST00000479485 ITPKCQ96DU7 683 aa8.63□□□□□ -1.03
SSR1-207ENST00000479485 PPP1R12CQ9BZL4 782 aa8.63□□□□□ -1.03
SSR1-207ENST00000479485 CNTNAP5Q8WYK1 1306 aa8.62□□□□□ -1.03
SSR1-207ENST00000479485 PALM3A6NDB9 673 aaPredicted RBP8.62□□□□□ -1.03
SSR1-207ENST00000479485 NR3C2P08235 984 aa8.62□□□□□ -1.03
SSR1-207ENST00000479485 SKIP12755 728 aa8.62□□□□□ -1.03
SSR1-207ENST00000479485 GRM5P41594 1212 aa8.62□□□□□ -1.03
SSR1-207ENST00000479485 PTSQ03393 145 aa8.62□□□□□ -1.03
SSR1-207ENST00000479485 SEPT12Q8IYM1 358 aa8.62□□□□□ -1.03
SSR1-207ENST00000479485 PHTF2Q8N3S3 785 aa8.62□□□□□ -1.03
SSR1-207ENST00000479485 CCDC85AQ96PX6 553 aaPredicted RBP8.62□□□□□ -1.03
SSR1-207ENST00000479485 USP17L5A8MUK1 530 aa8.61□□□□□ -1.03
SSR1-207ENST00000479485 ATP9BO43861 1147 aa8.61□□□□□ -1.03
SSR1-207ENST00000479485 RNF20Q5VTR2 975 aa8.61□□□□□ -1.03
SSR1-207ENST00000479485 PLPP7Q8NBV4 271 aa8.61□□□□□ -1.03
SSR1-207ENST00000479485 NFATC2IPQ8NCF5 419 aa8.61□□□□□ -1.03
SSR1-207ENST00000479485 TFIP11Q9UBB9 837 aaKnown RBP8.61□□□□□ -1.03
SSR1-207ENST00000479485 NR5A1Q13285 461 aa8.6□□□□□ -1.03
SSR1-207ENST00000479485 CFAP70Q5T0N1 1121 aa8.6□□□□□ -1.03
SSR1-207ENST00000479485 CCDC116Q8IYX3 515 aa8.6□□□□□ -1.03
SSR1-207ENST00000479485 LINC00528Q8N1L1 170 aa8.6□□□□□ -1.03
SSR1-207ENST00000479485 DOLKQ9UPQ8 538 aa8.6□□□□□ -1.03
SSR1-207ENST00000479485 PCDHB11Q9Y5F2 797 aa8.6□□□□□ -1.03
SSR1-207ENST00000479485 MAFBQ9Y5Q3 323 aaPredicted RBP8.6□□□□□ -1.03
SSR1-207ENST00000479485 USP17L3A6NCW0 530 aa8.59□□□□□ -1.03
SSR1-207ENST00000479485 USP17L4A6NCW7 530 aa8.59□□□□□ -1.03
SSR1-207ENST00000479485 ERVH48-1M5A8F1 160 aa8.59□□□□□ -1.03
SSR1-207ENST00000479485 BAG6P46379 1132 aa8.59□□□□□ -1.03
SSR1-207ENST00000479485 TSGA10IPQ3SY00 556 aa8.59□□□□□ -1.03
SSR1-207ENST00000479485 USP17L2Q6R6M4 530 aa8.59□□□□□ -1.03
SSR1-207ENST00000479485 USP17L1Q7RTZ2 530 aa8.59□□□□□ -1.03
SSR1-207ENST00000479485 DEPDC4Q8N2C3 294 aa8.59□□□□□ -1.03
SSR1-207ENST00000479485 CHIC2Q9UKJ5 165 aa8.59□□□□□ -1.03
SSR1-207ENST00000479485 ADAMTS2O95450 1211 aa8.58□□□□□ -1.04
SSR1-207ENST00000479485 RFX1P22670 979 aa8.58□□□□□ -1.04
SSR1-207ENST00000479485 DHX9Q08211 1270 aaKnown RBP8.58□□□□□ -1.04
SSR1-207ENST00000479485 NCOA4Q13772 614 aa8.58□□□□□ -1.04
SSR1-207ENST00000479485 OXLD1Q5BKU9 147 aa8.58□□□□□ -1.04
SSR1-207ENST00000479485 VWA5B2Q8N398 1253 aa8.58□□□□□ -1.04
SSR1-207ENST00000479485 CCDC155Q8N6L0 562 aa8.58□□□□□ -1.04
SSR1-207ENST00000479485 TMPRSS4Q9NRS4 437 aa8.58□□□□□ -1.04
SSR1-207ENST00000479485 FURINP09958 794 aa8.57□□□□□ -1.04
SSR1-207ENST00000479485 LMOD1P29536 600 aaPredicted RBP8.57□□□□□ -1.04
SSR1-207ENST00000479485 PPP1R26Q5T8A7 1209 aaPredicted RBP8.57□□□□□ -1.04
SSR1-207ENST00000479485 CDCA7Q9BWT1 371 aaPredicted RBP8.57□□□□□ -1.04
SSR1-207ENST00000479485 BTBD11A6QL63 1104 aa8.56□□□□□ -1.04
SSR1-207ENST00000479485 CELA2BP08218 269 aaPredicted RBP8.56□□□□□ -1.04
SSR1-207ENST00000479485 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.56□□□□□ -1.043e-17■■□□□ 13.5
SSR1-207ENST00000479485 MAP7D1Q3KQU3 841 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms