RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 MARCH10Q8NA82 808 aaPredicted RBP33.55■■■□□ 2.96
PERM1-203ENST00000479361 PLEKHG2Q9H7P9 1386 aa33.55■■■□□ 2.96
PERM1-203ENST00000479361 EP400Q96L91 3159 aa33.54■■■□□ 2.96
PERM1-203ENST00000479361 KDRP35968 1356 aa33.54■■■□□ 2.96
PERM1-203ENST00000479361 U2SURPO15042 1029 aaKnown RBP33.53■■■□□ 2.96
PERM1-203ENST00000479361 AEBP1Q8IUX7 1158 aa33.51■■■□□ 2.95
PERM1-203ENST00000479361 DDX54Q8TDD1 881 aaKnown RBP33.51■■■□□ 2.95
PERM1-203ENST00000479361 UPF1Q92900 1129 aaKnown RBP eCLIP33.51■■■□□ 2.95
PERM1-203ENST00000479361 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.51■■■□□ 2.95
PERM1-203ENST00000479361 SPG7Q9UQ90 795 aa33.51■■■□□ 2.95
PERM1-203ENST00000479361 ANP32CO43423 234 aa33.5■■■□□ 2.95
PERM1-203ENST00000479361 PCDH11XQ9BZA7 1347 aa33.49■■■□□ 2.95
PERM1-203ENST00000479361 PCDH11YQ9BZA8 1340 aa33.49■■■□□ 2.95
PERM1-203ENST00000479361 BCL9O00512 1426 aa33.48■■■□□ 2.95
PERM1-203ENST00000479361 CCDC125Q86Z20 511 aa33.48■■■□□ 2.95
PERM1-203ENST00000479361 HMOX1P09601 288 aa33.47■■■□□ 2.95
PERM1-203ENST00000479361 PKD1L3Q7Z443 1732 aa33.45■■■□□ 2.94
PERM1-203ENST00000479361 AMOTQ4VCS5 1084 aa33.44■■■□□ 2.94
PERM1-203ENST00000479361 PLEKHO1Q53GL0 409 aaPredicted RBP33.44■■■□□ 2.94
PERM1-203ENST00000479361 U2AF1L5P0DN76 240 aaPredicted RBP33.43■■■□□ 2.94
PERM1-203ENST00000479361 U2AF1Q01081 240 aaKnown RBP eCLIP33.43■■■□□ 2.94
PERM1-203ENST00000479361 SF3B2Q13435 895 aaKnown RBP33.43■■■□□ 2.94
PERM1-203ENST00000479361 SHANK3Q9BYB0 1731 aa33.42■■■□□ 2.94
PERM1-203ENST00000479361 TRIM37O94972 964 aa33.4■■■□□ 2.94
PERM1-203ENST00000479361 CYP27B1O15528 508 aa33.38■■■□□ 2.93
PERM1-203ENST00000479361 IFNL2Q8IZJ0 200 aa33.37■■■□□ 2.93
PERM1-203ENST00000479361 FCHSD2O94868 740 aa33.36■■■□□ 2.93
PERM1-203ENST00000479361 PHKG2P15735 406 aa33.34■■■□□ 2.93
PERM1-203ENST00000479361 ZNF530Q6P9A1 599 aaPredicted RBP33.34■■■□□ 2.93
PERM1-203ENST00000479361 BCL11BQ9C0K0 894 aaPredicted RBP33.34■■■□□ 2.93
PERM1-203ENST00000479361 RSPH6AQ9H0K4 717 aa33.34■■■□□ 2.93
PERM1-203ENST00000479361 PRKAR2BP31323 418 aa33.32■■■□□ 2.92
PERM1-203ENST00000479361 NKX1-1Q15270 411 aaPredicted RBP33.32■■■□□ 2.92
PERM1-203ENST00000479361 C1orf141Q5JVX7 400 aa33.32■■■□□ 2.92
PERM1-203ENST00000479361 ACSBG1Q96GR2 724 aa33.32■■■□□ 2.92
PERM1-203ENST00000479361 SBF2Q86WG5 1849 aa33.31■■■□□ 2.92
PERM1-203ENST00000479361 HSP90AB1P08238 724 aaKnown RBP33.31■■■□□ 2.92
PERM1-203ENST00000479361 PNNQ9H307 717 aaKnown RBP33.3■■■□□ 2.92
PERM1-203ENST00000479361 BAG6P46379 1132 aa33.29■■■□□ 2.92
PERM1-203ENST00000479361 WDR43Q15061 677 aaKnown RBP eCLIP33.29■■■□□ 2.92
PERM1-203ENST00000479361 APBA3O96018 575 aa33.28■■■□□ 2.92
PERM1-203ENST00000479361 TNS1Q9HBL0 1735 aaKnown RBP33.28■■■□□ 2.92
PERM1-203ENST00000479361 NHSQ6T4R5 1651 aa33.27■■■□□ 2.92
PERM1-203ENST00000479361 KCNQ2O43526 872 aa33.27■■■□□ 2.92
PERM1-203ENST00000479361 NEFMP07197 916 aa33.27■■■□□ 2.92
PERM1-203ENST00000479361 MTHFSDQ2M296 383 aaKnown RBP33.26■■■□□ 2.91
PERM1-203ENST00000479361 GAS2L2Q8NHY3 880 aa33.26■■■□□ 2.91
PERM1-203ENST00000479361 SYTL4Q96C24 671 aaPredicted RBP33.26■■■□□ 2.91
PERM1-203ENST00000479361 PRIM1P49642 420 aaKnown RBP33.25■■■□□ 2.91
PERM1-203ENST00000479361 AKAP4Q5JQC9 854 aa33.25■■■□□ 2.91
PERM1-203ENST00000479361 DCAF5Q96JK2 942 aa33.24■■■□□ 2.91
PERM1-203ENST00000479361 DOT1LQ8TEK3 1739 aa33.24■■■□□ 2.91
PERM1-203ENST00000479361 PTF1AQ7RTS3 328 aa33.22■■■□□ 2.91
PERM1-203ENST00000479361 PHACTR3Q96KR7 559 aa33.22■■■□□ 2.91
PERM1-203ENST00000479361 DEFB132Q7Z7B7 95 aa33.21■■■□□ 2.91
PERM1-203ENST00000479361 KAT6BQ8WYB5 2073 aa33.21■■■□□ 2.91
PERM1-203ENST00000479361 MRS2Q9HD23 443 aa33.19■■■□□ 2.9
PERM1-203ENST00000479361 MAPK8IP3Q9UPT6 1336 aa33.18■■■□□ 2.9
PERM1-203ENST00000479361 ERVV-2B6SEH9 535 aa33.17■■■□□ 2.9
PERM1-203ENST00000479361 PLSCR1O15162 318 aa33.17■■■□□ 2.9
PERM1-203ENST00000479361 EN1Q05925 392 aaPredicted RBP33.17■■■□□ 2.9
PERM1-203ENST00000479361 DIEXFQ68CQ4 756 aaKnown RBP33.17■■■□□ 2.9
PERM1-203ENST00000479361 PLEKHF1Q96S99 279 aa33.17■■■□□ 2.9
PERM1-203ENST00000479361 CCDC184Q52MB2 194 aa33.16■■■□□ 2.9
PERM1-203ENST00000479361 MPRIPQ6WCQ1 1025 aa33.16■■■□□ 2.9
PERM1-203ENST00000479361 KDM6AO15550 1401 aaPredicted RBP33.15■■■□□ 2.9
PERM1-203ENST00000479361 MAP3K5Q99683 1374 aa33.15■■■□□ 2.9
PERM1-203ENST00000479361 TMOD3Q9NYL9 352 aa33.15■■■□□ 2.9
PERM1-203ENST00000479361 ADAMTS8Q9UP79 889 aa33.15■■■□□ 2.9
PERM1-203ENST00000479361 TOGARAM1Q9Y4F4 1720 aa33.15■■■□□ 2.9
PERM1-203ENST00000479361 GNAT3A8MTJ3 354 aa33.14■■■□□ 2.9
PERM1-203ENST00000479361 BTAF1O14981 1849 aa33.14■■■□□ 2.9
PERM1-203ENST00000479361 CAMKK2Q96RR4 588 aa33.13■■■□□ 2.89
PERM1-203ENST00000479361 CABP4P57796 275 aa33.11■■■□□ 2.89
PERM1-203ENST00000479361 EZH2Q15910 746 aaKnown RBP33.1■■■□□ 2.89
PERM1-203ENST00000479361 PIGBQ92521 554 aa33.1■■■□□ 2.89
PERM1-203ENST00000479361 RGPD3A6NKT7 1758 aaPredicted RBP33.1■■■□□ 2.89
PERM1-203ENST00000479361 RGPD4Q7Z3J3 1758 aa33.1■■■□□ 2.89
PERM1-203ENST00000479361 RNMTO43148 476 aaKnown RBP33.09■■■□□ 2.89
PERM1-203ENST00000479361 ITGB4P16144 1822 aa33.09■■■□□ 2.89
PERM1-203ENST00000479361 RUNDC1Q96C34 613 aa33.08■■■□□ 2.89
PERM1-203ENST00000479361 LGR6Q9HBX8 967 aa33.08■■■□□ 2.89
PERM1-203ENST00000479361 NFE2L2Q16236 605 aa33.07■■■□□ 2.88
PERM1-203ENST00000479361 PNISRQ8TF01 805 aaKnown RBP33.07■■■□□ 2.88
PERM1-203ENST00000479361 RTF1Q92541 710 aaKnown RBP33.07■■■□□ 2.88
PERM1-203ENST00000479361 SCN11AQ9UI33 1791 aa33.06■■■□□ 2.88
PERM1-203ENST00000479361 SMARCC1Q92922 1105 aaPredicted RBP33.06■■■□□ 2.88
PERM1-203ENST00000479361 HTATSF1O43719 755 aaKnown RBP33.05■■■□□ 2.88
PERM1-203ENST00000479361 CCDC146Q8IYE0 955 aa33.05■■■□□ 2.88
PERM1-203ENST00000479361 SLC52A2Q9HAB3 445 aa33.04■■■□□ 2.88
PERM1-203ENST00000479361 ADAMTS7Q9UKP4 1686 aa33.04■■■□□ 2.88
PERM1-203ENST00000479361 NFATC2IPQ8NCF5 419 aa33.03■■■□□ 2.88
PERM1-203ENST00000479361 TXNRD1Q16881 649 aa33.02■■■□□ 2.88
PERM1-203ENST00000479361 IL17REQ8NFR9 667 aa33.02■■■□□ 2.88
PERM1-203ENST00000479361 MRC1P22897 1456 aa33.01■■■□□ 2.88
PERM1-203ENST00000479361 PALLDQ8WX93 1383 aa33■■■□□ 2.87
PERM1-203ENST00000479361 TEFQ10587 303 aa33■■■□□ 2.87
PERM1-203ENST00000479361 CEMIPQ8WUJ3 1361 aa32.99■■■□□ 2.87
PERM1-203ENST00000479361 TMPOP42166 694 aaKnown RBP32.99■■■□□ 2.87
PERM1-203ENST00000479361 SLC27A3Q5K4L6 730 aa32.99■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms