RNA–Protein interactions for RNA: ENST00000479341.1

RUNX3-204, Transcript of runt related transcription factor 3, humanhuman

TSL 1 (best)

Gene RUNX3, Length 284 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-204ENST00000479341 MEGF6O75095 1541 aa24.74■■□□□ 1.55
RUNX3-204ENST00000479341 ONECUT3O60422 494 aaPredicted RBP24.73■■□□□ 1.55
RUNX3-204ENST00000479341 RBM6P78332 1123 aaKnown RBP24.73■■□□□ 1.55
RUNX3-204ENST00000479341 PLEKHG2Q9H7P9 1386 aa24.72■■□□□ 1.55
RUNX3-204ENST00000479341 FAM98CQ17RN3 349 aaKnown RBP24.72■■□□□ 1.55
RUNX3-204ENST00000479341 PHACTR3Q96KR7 559 aa24.71■■□□□ 1.55
RUNX3-204ENST00000479341 OVOS2A0A0G2JMS6 1433 aa24.7■■□□□ 1.55
RUNX3-204ENST00000479341 RUNDC1Q96C34 613 aa24.7■■□□□ 1.54
RUNX3-204ENST00000479341 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.7■■□□□ 1.54
RUNX3-204ENST00000479341 WNK3Q9BYP7 1800 aa24.7■■□□□ 1.54
RUNX3-204ENST00000479341 CCDC146Q8IYE0 955 aa24.69■■□□□ 1.54
RUNX3-204ENST00000479341 PLEKHO1Q53GL0 409 aaPredicted RBP24.68■■□□□ 1.54
RUNX3-204ENST00000479341 PARP4Q9UKK3 1724 aaKnown RBP24.67■■□□□ 1.54
RUNX3-204ENST00000479341 AMOTQ4VCS5 1084 aa24.67■■□□□ 1.54
RUNX3-204ENST00000479341 THSD7AQ9UPZ6 1657 aa24.66■■□□□ 1.54
RUNX3-204ENST00000479341 ZCRB1Q8TBF4 217 aaKnown RBP24.66■■□□□ 1.54
RUNX3-204ENST00000479341 NEFMP07197 916 aa24.65■■□□□ 1.54
RUNX3-204ENST00000479341 MTHFSDQ2M296 383 aaKnown RBP24.65■■□□□ 1.54
RUNX3-204ENST00000479341 SPG7Q9UQ90 795 aa24.65■■□□□ 1.54
RUNX3-204ENST00000479341 MAPK8IP3Q9UPT6 1336 aa24.64■■□□□ 1.54
RUNX3-204ENST00000479341 EXOC5O00471 708 aa24.64■■□□□ 1.54
RUNX3-204ENST00000479341 SEPT12Q8IYM1 358 aa24.64■■□□□ 1.54
RUNX3-204ENST00000479341 PKD1L3Q7Z443 1732 aa24.64■■□□□ 1.53
RUNX3-204ENST00000479341 DDB1Q16531 1140 aa24.63■■□□□ 1.53
RUNX3-204ENST00000479341 RGS12O14924 1447 aa24.62■■□□□ 1.53
RUNX3-204ENST00000479341 GAS2L2Q8NHY3 880 aa24.62■■□□□ 1.53
RUNX3-204ENST00000479341 TNS2Q63HR2 1409 aa24.61■■□□□ 1.53
RUNX3-204ENST00000479341 APAF1O14727 1248 aa24.61■■□□□ 1.53
RUNX3-204ENST00000479341 NFE2L2Q16236 605 aa24.61■■□□□ 1.53
RUNX3-204ENST00000479341 LRRC37A3O60309 1634 aa24.61■■□□□ 1.53
RUNX3-204ENST00000479341 TMPOP42166 694 aaKnown RBP24.6■■□□□ 1.53
RUNX3-204ENST00000479341 ZNF530Q6P9A1 599 aaPredicted RBP24.6■■□□□ 1.53
RUNX3-204ENST00000479341 A0A0G2JS52 829 aa24.59■■□□□ 1.53
RUNX3-204ENST00000479341 CYP27B1O15528 508 aa24.59■■□□□ 1.53
RUNX3-204ENST00000479341 MYT1Q01538 1121 aa24.59■■□□□ 1.53
RUNX3-204ENST00000479341 PCDH11XQ9BZA7 1347 aa24.59■■□□□ 1.53
RUNX3-204ENST00000479341 PCDH11YQ9BZA8 1340 aa24.59■■□□□ 1.53
RUNX3-204ENST00000479341 SHANK3Q9BYB0 1731 aa24.58■■□□□ 1.52
RUNX3-204ENST00000479341 PHKG2P15735 406 aa24.57■■□□□ 1.52
RUNX3-204ENST00000479341 IFNL2Q8IZJ0 200 aa24.57■■□□□ 1.52
RUNX3-204ENST00000479341 DDX54Q8TDD1 881 aaKnown RBP24.57■■□□□ 1.52
RUNX3-204ENST00000479341 AKAP4Q5JQC9 854 aa24.56■■□□□ 1.52
RUNX3-204ENST00000479341 MARCH10Q8NA82 808 aaPredicted RBP24.56■■□□□ 1.52
RUNX3-204ENST00000479341 PDE3BQ13370 1112 aa24.55■■□□□ 1.52
RUNX3-204ENST00000479341 C1orf141Q5JVX7 400 aa24.55■■□□□ 1.52
RUNX3-204ENST00000479341 RRP7AQ9Y3A4 280 aaKnown RBP24.55■■□□□ 1.52
RUNX3-204ENST00000479341 RIPK4P57078 832 aa24.54■■□□□ 1.52
RUNX3-204ENST00000479341 NKX1-1Q15270 411 aaPredicted RBP24.54■■□□□ 1.52
RUNX3-204ENST00000479341 NCBP3Q53F19 620 aaKnown RBP24.54■■□□□ 1.52
RUNX3-204ENST00000479341 GNAT3A8MTJ3 354 aa24.53■■□□□ 1.52
RUNX3-204ENST00000479341 MAP3K5Q99683 1374 aa24.53■■□□□ 1.52
RUNX3-204ENST00000479341 HTATSF1O43719 755 aaKnown RBP24.52■■□□□ 1.52
RUNX3-204ENST00000479341 NEUROD2Q15784 382 aa24.52■■□□□ 1.52
RUNX3-204ENST00000479341 SENP3-EIF4A1A0A087X0R7 540 aa24.51■■□□□ 1.51
RUNX3-204ENST00000479341 HSP90AB1P08238 724 aaKnown RBP24.51■■□□□ 1.51
RUNX3-204ENST00000479341 KRT27Q7Z3Y8 459 aa24.51■■□□□ 1.51
RUNX3-204ENST00000479341 TRIM35Q9UPQ4 493 aa24.51■■□□□ 1.51
RUNX3-204ENST00000479341 BRWD3Q6RI45 1802 aa24.5■■□□□ 1.51
RUNX3-204ENST00000479341 NGEFQ8N5V2 710 aa24.5■■□□□ 1.51
RUNX3-204ENST00000479341 DLG5Q8TDM6 1919 aa24.49■■□□□ 1.51
RUNX3-204ENST00000479341 IL17REQ8NFR9 667 aa24.49■■□□□ 1.51
RUNX3-204ENST00000479341 LMOD3Q0VAK6 560 aa24.48■■□□□ 1.51
RUNX3-204ENST00000479341 CCDC27Q2M243 656 aa24.48■■□□□ 1.51
RUNX3-204ENST00000479341 MPRIPQ6WCQ1 1025 aa24.48■■□□□ 1.51
RUNX3-204ENST00000479341 DCAF5Q96JK2 942 aa24.48■■□□□ 1.51
RUNX3-204ENST00000479341 KDM6AO15550 1401 aaPredicted RBP24.47■■□□□ 1.51
RUNX3-204ENST00000479341 RNMTO43148 476 aaKnown RBP24.47■■□□□ 1.51
RUNX3-204ENST00000479341 RTF1Q92541 710 aaKnown RBP24.47■■□□□ 1.51
RUNX3-204ENST00000479341 LGR6Q9HBX8 967 aa24.47■■□□□ 1.51
RUNX3-204ENST00000479341 BCL9O00512 1426 aa24.46■■□□□ 1.51
RUNX3-204ENST00000479341 DCTN1Q14203 1278 aa24.46■■□□□ 1.51
RUNX3-204ENST00000479341 ADAMTS7Q9UKP4 1686 aa24.46■■□□□ 1.51
RUNX3-204ENST00000479341 FAM182BQ5T319 152 aa24.45■■□□□ 1.5
RUNX3-204ENST00000479341 MCM10Q7L590 875 aa24.45■■□□□ 1.5
RUNX3-204ENST00000479341 SALL2Q9Y467 1007 aaPredicted RBP24.45■■□□□ 1.5
RUNX3-204ENST00000479341 CEMIPQ8WUJ3 1361 aa24.44■■□□□ 1.5
RUNX3-204ENST00000479341 HNRNPUQ00839 825 aaKnown RBP eCLIP24.44■■□□□ 1.5
RUNX3-204ENST00000479341 WWC1Q8IX03 1113 aa24.44■■□□□ 1.5
RUNX3-204ENST00000479341 ERVV-2B6SEH9 535 aa24.42■■□□□ 1.5
RUNX3-204ENST00000479341 THUMPD2Q9BTF0 503 aaKnown RBP24.42■■□□□ 1.5
RUNX3-204ENST00000479341 SCN11AQ9UI33 1791 aa24.42■■□□□ 1.5
RUNX3-204ENST00000479341 ZNF521Q96K83 1311 aa24.41■■□□□ 1.5
RUNX3-204ENST00000479341 FAM196AQ6ZSG2 479 aa24.41■■□□□ 1.5
RUNX3-204ENST00000479341 TOGARAM1Q9Y4F4 1720 aa24.39■■□□□ 1.5
RUNX3-204ENST00000479341 PRIM1P49642 420 aaKnown RBP24.38■■□□□ 1.49
RUNX3-204ENST00000479341 WDR63Q8IWG1 891 aa24.38■■□□□ 1.49
RUNX3-204ENST00000479341 SLC52A2Q9HAB3 445 aa24.38■■□□□ 1.49
RUNX3-204ENST00000479341 MRC1P22897 1456 aa24.38■■□□□ 1.49
RUNX3-204ENST00000479341 CABP4P57796 275 aa24.37■■□□□ 1.49
RUNX3-204ENST00000479341 ACSBG1Q96GR2 724 aa24.37■■□□□ 1.49
RUNX3-204ENST00000479341 VIRMAQ69YN4 1812 aaKnown RBP24.37■■□□□ 1.49
RUNX3-204ENST00000479341 TEFQ10587 303 aa24.36■■□□□ 1.49
RUNX3-204ENST00000479341 KCNQ2O43526 872 aa24.35■■□□□ 1.49
RUNX3-204ENST00000479341 CALD1Q05682 793 aaKnown RBP24.35■■□□□ 1.49
RUNX3-204ENST00000479341 NFATC2IPQ8NCF5 419 aa24.35■■□□□ 1.49
RUNX3-204ENST00000479341 DOT1LQ8TEK3 1739 aa24.35■■□□□ 1.49
RUNX3-204ENST00000479341 ZBED9Q6R2W3 1325 aa24.35■■□□□ 1.49
RUNX3-204ENST00000479341 TAF7Q15545 349 aaPredicted RBP24.34■■□□□ 1.49
RUNX3-204ENST00000479341 CCDC125Q86Z20 511 aa24.34■■□□□ 1.49
RUNX3-204ENST00000479341 PIGBQ92521 554 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms