RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 CPSF1Q10570 1443 aaKnown RBP16.56■□□□□ 0.24
CNKSR3-204ENST00000479339 GCP02774 474 aa16.55■□□□□ 0.24
CNKSR3-204ENST00000479339 PTMSP20962 102 aa16.55■□□□□ 0.24
CNKSR3-204ENST00000479339 PDE4CQ08493 712 aa16.55■□□□□ 0.24
CNKSR3-204ENST00000479339 PUS7Q96PZ0 661 aaKnown RBP16.55■□□□□ 0.24
CNKSR3-204ENST00000479339 CCDC125Q86Z20 511 aa16.54■□□□□ 0.24
CNKSR3-204ENST00000479339 TTC21BQ7Z4L5 1316 aa16.54■□□□□ 0.24
CNKSR3-204ENST00000479339 SLIT3O75094 1523 aa16.54■□□□□ 0.24
CNKSR3-204ENST00000479339 AKAP12Q02952 1782 aa16.54■□□□□ 0.24
CNKSR3-204ENST00000479339 NLRP6P59044 892 aa16.53■□□□□ 0.24
CNKSR3-204ENST00000479339 CCDC173Q0VFZ6 552 aa16.53■□□□□ 0.24
CNKSR3-204ENST00000479339 UTP14CQ5TAP6 766 aaKnown RBP16.53■□□□□ 0.24
CNKSR3-204ENST00000479339 TBC1D32Q96NH3 1257 aa16.53■□□□□ 0.24
CNKSR3-204ENST00000479339 TTC21AQ8NDW8 1320 aa16.53■□□□□ 0.24
CNKSR3-204ENST00000479339 FAM98CQ17RN3 349 aaKnown RBP16.53■□□□□ 0.24
CNKSR3-204ENST00000479339 TBC1D2Q9BYX2 928 aa16.53■□□□□ 0.24
CNKSR3-204ENST00000479339 GZF1Q9H116 711 aaPredicted RBP16.53■□□□□ 0.24
CNKSR3-204ENST00000479339 ZSCAN30Q86W11 494 aa16.52■□□□□ 0.24
CNKSR3-204ENST00000479339 PIK3C2AO00443 1686 aa16.52■□□□□ 0.24
CNKSR3-204ENST00000479339 BRWD3Q6RI45 1802 aa16.52■□□□□ 0.23
CNKSR3-204ENST00000479339 SPATA31A1Q5TZJ5 1347 aa16.52■□□□□ 0.23
CNKSR3-204ENST00000479339 LMO7Q8WWI1 1683 aa16.52■□□□□ 0.23
CNKSR3-204ENST00000479339 KRT27Q7Z3Y8 459 aa16.52■□□□□ 0.23
CNKSR3-204ENST00000479339 NINLQ9Y2I6 1382 aa16.51■□□□□ 0.23
CNKSR3-204ENST00000479339 TESK2Q96S53 571 aa16.51■□□□□ 0.23
CNKSR3-204ENST00000479339 CAMTA1Q9Y6Y1 1673 aa16.51■□□□□ 0.23
CNKSR3-204ENST00000479339 STRN4Q9NRL3 753 aa16.5■□□□□ 0.23
CNKSR3-204ENST00000479339 CD163L1Q9NR16 1453 aa16.5■□□□□ 0.23
CNKSR3-204ENST00000479339 ST20-MTHFSA0A0A6YYL1 179 aa16.5■□□□□ 0.23
CNKSR3-204ENST00000479339 RIPK4P57078 832 aa16.5■□□□□ 0.23
CNKSR3-204ENST00000479339 PPP1R9BQ96SB3 815 aa16.5■□□□□ 0.23
CNKSR3-204ENST00000479339 THSD7AQ9UPZ6 1657 aa16.49■□□□□ 0.23
CNKSR3-204ENST00000479339 EVA1CP58658 441 aa16.49■□□□□ 0.23
CNKSR3-204ENST00000479339 SKOR2Q2VWA4 1001 aaPredicted RBP16.49■□□□□ 0.23
CNKSR3-204ENST00000479339 AATKQ6ZMQ8 1374 aa16.49■□□□□ 0.23
CNKSR3-204ENST00000479339 MON2Q7Z3U7 1717 aa16.48■□□□□ 0.23
CNKSR3-204ENST00000479339 A0A0G2JS52 829 aa16.48■□□□□ 0.23
CNKSR3-204ENST00000479339 DUSP27Q5VZP5 1158 aa16.48■□□□□ 0.23
CNKSR3-204ENST00000479339 MSNP26038 577 aaKnown RBP16.47■□□□□ 0.23
CNKSR3-204ENST00000479339 HS1BP3Q53T59 392 aa16.47■□□□□ 0.23
CNKSR3-204ENST00000479339 SLC12A5Q9H2X9 1139 aa16.47■□□□□ 0.23
CNKSR3-204ENST00000479339 BARGINQ6ZT62 677 aa16.46■□□□□ 0.23
CNKSR3-204ENST00000479339 HDGFL2Q7Z4V5 671 aaPredicted RBP16.46■□□□□ 0.23
CNKSR3-204ENST00000479339 KCNH5Q8NCM2 988 aa16.46■□□□□ 0.23
CNKSR3-204ENST00000479339 USP31Q70CQ4 1352 aa16.46■□□□□ 0.23
CNKSR3-204ENST00000479339 CGNL1Q0VF96 1302 aa16.46■□□□□ 0.23
CNKSR3-204ENST00000479339 SEC24BO95487 1268 aa16.46■□□□□ 0.23
CNKSR3-204ENST00000479339 LARP1Q6PKG0 1096 aaKnown RBP16.46■□□□□ 0.23
CNKSR3-204ENST00000479339 ANP32BQ92688 251 aaKnown RBP16.46■□□□□ 0.23
CNKSR3-204ENST00000479339 COL5A2P05997 1499 aaPredicted RBP16.46■□□□□ 0.23
CNKSR3-204ENST00000479339 TERF2IPQ9NYB0 399 aa16.45■□□□□ 0.22
CNKSR3-204ENST00000479339 DYNC1I1O14576 645 aa16.45■□□□□ 0.22
CNKSR3-204ENST00000479339 ARHGEF25Q86VW2 580 aa16.45■□□□□ 0.22
CNKSR3-204ENST00000479339 EDC4Q6P2E9 1401 aaKnown RBP16.44■□□□□ 0.22
CNKSR3-204ENST00000479339 THRAP3Q9Y2W1 955 aaKnown RBP16.44■□□□□ 0.22
CNKSR3-204ENST00000479339 COL18A1P39060 1754 aa16.44■□□□□ 0.22
CNKSR3-204ENST00000479339 NFAT5O94916 1531 aa16.43■□□□□ 0.22
CNKSR3-204ENST00000479339 USP54Q70EL1 1684 aa16.43■□□□□ 0.22
CNKSR3-204ENST00000479339 DMTNQ08495 405 aa16.43■□□□□ 0.22
CNKSR3-204ENST00000479339 TCP11L2Q8N4U5 519 aa16.43■□□□□ 0.22
CNKSR3-204ENST00000479339 ZNF521Q96K83 1311 aa16.43■□□□□ 0.22
CNKSR3-204ENST00000479339 IBTKQ9P2D0 1353 aaPredicted RBP16.43■□□□□ 0.22
CNKSR3-204ENST00000479339 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.43■□□□□ 0.22
CNKSR3-204ENST00000479339 A0A1W2PP64 1363 aa16.42■□□□□ 0.22
CNKSR3-204ENST00000479339 ZBTB7CA1YPR0 619 aa16.42■□□□□ 0.22
CNKSR3-204ENST00000479339 GOLGA2Q08379 1002 aa16.42■□□□□ 0.22
CNKSR3-204ENST00000479339 FAM13BQ9NYF5 915 aa16.42■□□□□ 0.22
CNKSR3-204ENST00000479339 CRB1P82279 1406 aa16.42■□□□□ 0.22
CNKSR3-204ENST00000479339 SF3B2Q13435 895 aaKnown RBP16.41■□□□□ 0.22
CNKSR3-204ENST00000479339 NME9Q86XW9 330 aa16.41■□□□□ 0.22
CNKSR3-204ENST00000479339 ZRANB1Q9UGI0 708 aa16.41■□□□□ 0.22
CNKSR3-204ENST00000479339 ABCC6O95255 1503 aa16.4■□□□□ 0.22
CNKSR3-204ENST00000479339 ZNF500O60304 480 aaPredicted RBP16.4■□□□□ 0.22
CNKSR3-204ENST00000479339 TNNT2P45379 298 aaPredicted RBP16.4■□□□□ 0.22
CNKSR3-204ENST00000479339 TMF1P82094 1093 aa16.4■□□□□ 0.22
CNKSR3-204ENST00000479339 CSPP1Q1MSJ5 1256 aa16.4■□□□□ 0.22
CNKSR3-204ENST00000479339 GBP4Q96PP9 640 aa16.4■□□□□ 0.22
CNKSR3-204ENST00000479339 CIZ1Q9ULV3 898 aaPredicted RBP16.4■□□□□ 0.22
CNKSR3-204ENST00000479339 AXIN2Q9Y2T1 843 aa16.4■□□□□ 0.22
CNKSR3-204ENST00000479339 PER1O15534 1290 aaPredicted RBP16.4■□□□□ 0.22
CNKSR3-204ENST00000479339 PDE3AQ14432 1141 aa16.4■□□□□ 0.22
CNKSR3-204ENST00000479339 IGHDP01880 384 aa16.38■□□□□ 0.21
CNKSR3-204ENST00000479339 DEFB132Q7Z7B7 95 aa16.38■□□□□ 0.21
CNKSR3-204ENST00000479339 WDR17Q8IZU2 1322 aa16.38■□□□□ 0.21
CNKSR3-204ENST00000479339 OVOS2A0A0J9YW53 1432 aa16.38■□□□□ 0.21
CNKSR3-204ENST00000479339 SOX12O15370 315 aa16.38■□□□□ 0.21
CNKSR3-204ENST00000479339 OVOS2Q6IE36 1432 aa16.38■□□□□ 0.21
CNKSR3-204ENST00000479339 EP400Q96L91 3159 aa16.38■□□□□ 0.21
CNKSR3-204ENST00000479339 UQCRHLA0A096LP55 91 aa16.37■□□□□ 0.21
CNKSR3-204ENST00000479339 UQCRHP07919 91 aa16.37■□□□□ 0.21
CNKSR3-204ENST00000479339 NASPP49321 788 aaPredicted RBP16.37■□□□□ 0.21
CNKSR3-204ENST00000479339 FAM182BQ5T319 152 aa16.37■□□□□ 0.21
CNKSR3-204ENST00000479339 FAM196AQ6ZSG2 479 aa16.37■□□□□ 0.21
CNKSR3-204ENST00000479339 TRMT2AQ8IZ69 625 aaKnown RBP16.37■□□□□ 0.21
CNKSR3-204ENST00000479339 CLUAP1Q96AJ1 413 aa16.37■□□□□ 0.21
CNKSR3-204ENST00000479339 ANKRD36BQ8N2N9 1353 aa16.37■□□□□ 0.21
CNKSR3-204ENST00000479339 KIF20AO95235 890 aa16.36■□□□□ 0.21
CNKSR3-204ENST00000479339 SLFN5Q08AF3 891 aa16.36■□□□□ 0.21
CNKSR3-204ENST00000479339 CDCA8Q53HL2 280 aa16.36■□□□□ 0.21
CNKSR3-204ENST00000479339 TOM1L2Q6ZVM7 507 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms