RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 COG6Q9Y2V7 657 aa12.62□□□□□ -0.39
RAD51B-208ENST00000479335 CRB1P82279 1406 aa12.62□□□□□ -0.39
RAD51B-208ENST00000479335 NCAPD2Q15021 1401 aa12.62□□□□□ -0.39
RAD51B-208ENST00000479335 GNAT3A8MTJ3 354 aa12.61□□□□□ -0.39
RAD51B-208ENST00000479335 TCERG1O14776 1098 aaKnown RBP12.61□□□□□ -0.39
RAD51B-208ENST00000479335 DCTN1Q14203 1278 aa12.61□□□□□ -0.39
RAD51B-208ENST00000479335 TWISTNBQ3B726 338 aaPredicted RBP12.61□□□□□ -0.39
RAD51B-208ENST00000479335 LMOD2Q6P5Q4 547 aa12.61□□□□□ -0.39
RAD51B-208ENST00000479335 BCL2L13Q9BXK5 485 aa12.61□□□□□ -0.39
RAD51B-208ENST00000479335 TNS3Q68CZ2 1445 aa12.6□□□□□ -0.39
RAD51B-208ENST00000479335 MVPQ14764 893 aaKnown RBP12.6□□□□□ -0.39
RAD51B-208ENST00000479335 FTSJ3Q8IY81 847 aaKnown RBP12.6□□□□□ -0.39
RAD51B-208ENST00000479335 LTV1Q96GA3 475 aaPredicted RBP12.6□□□□□ -0.39
RAD51B-208ENST00000479335 NOB1Q9ULX3 412 aaKnown RBP12.6□□□□□ -0.39
RAD51B-208ENST00000479335 ABCC6O95255 1503 aa12.6□□□□□ -0.39
RAD51B-208ENST00000479335 PXDNQ92626 1479 aa12.59□□□□□ -0.39
RAD51B-208ENST00000479335 SPATA31A3Q5VYP0 1347 aa12.59□□□□□ -0.39
RAD51B-208ENST00000479335 NBPF6Q5VWK0 638 aa12.59□□□□□ -0.39
RAD51B-208ENST00000479335 MCM10Q7L590 875 aa12.59□□□□□ -0.39
RAD51B-208ENST00000479335 MRPL50Q8N5N7 158 aaKnown RBP12.59□□□□□ -0.39
RAD51B-208ENST00000479335 NBPF4Q96M43 638 aa12.59□□□□□ -0.39
RAD51B-208ENST00000479335 DDX19BQ9UMR2 479 aa12.59□□□□□ -0.39
RAD51B-208ENST00000479335 SOS1Q07889 1333 aaPredicted RBP12.59□□□□□ -0.39
RAD51B-208ENST00000479335 ZNF335Q9H4Z2 1342 aaPredicted RBP12.59□□□□□ -0.39
RAD51B-208ENST00000479335 RLBP1P12271 317 aa12.59□□□□□ -0.39
RAD51B-208ENST00000479335 TRIM27P14373 513 aa12.59□□□□□ -0.39
RAD51B-208ENST00000479335 AMOTQ4VCS5 1084 aa12.59□□□□□ -0.39
RAD51B-208ENST00000479335 CHMP4BQ9H444 224 aaKnown RBP12.59□□□□□ -0.39
RAD51B-208ENST00000479335 SLAIN2Q9P270 581 aa12.59□□□□□ -0.39
RAD51B-208ENST00000479335 MED1Q15648 1581 aaPredicted RBP12.58□□□□□ -0.4
RAD51B-208ENST00000479335 MAP3K5Q99683 1374 aa12.58□□□□□ -0.4
RAD51B-208ENST00000479335 PLEKHG2Q9H7P9 1386 aa12.58□□□□□ -0.4
RAD51B-208ENST00000479335 BRINP3Q76B58 766 aa12.58□□□□□ -0.4
RAD51B-208ENST00000479335 TSPYL6Q8N831 410 aa12.58□□□□□ -0.4
RAD51B-208ENST00000479335 C8orf58Q8NAV2 365 aa12.58□□□□□ -0.4
RAD51B-208ENST00000479335 ANKRD24Q8TF21 1146 aa12.58□□□□□ -0.4
RAD51B-208ENST00000479335 RBM19Q9Y4C8 960 aaKnown RBP12.58□□□□□ -0.4
RAD51B-208ENST00000479335 CAMTA1Q9Y6Y1 1673 aa12.57□□□□□ -0.4
RAD51B-208ENST00000479335 PLEKHO1Q53GL0 409 aaPredicted RBP12.57□□□□□ -0.4
RAD51B-208ENST00000479335 LRRC37A3O60309 1634 aa12.56□□□□□ -0.4
RAD51B-208ENST00000479335 SOS2Q07890 1332 aaPredicted RBP12.56□□□□□ -0.4
RAD51B-208ENST00000479335 FOXD4L1Q9NU39 408 aa12.56□□□□□ -0.4
RAD51B-208ENST00000479335 CPDO75976 1380 aa12.56□□□□□ -0.4
RAD51B-208ENST00000479335 TAF7Q15545 349 aaPredicted RBP12.55□□□□□ -0.4
RAD51B-208ENST00000479335 API5Q9BZZ5 524 aaKnown RBP12.55□□□□□ -0.4
RAD51B-208ENST00000479335 TNNQ9UQP3 1299 aa12.55□□□□□ -0.4
RAD51B-208ENST00000479335 ZBTB7CA1YPR0 619 aa12.55□□□□□ -0.4
RAD51B-208ENST00000479335 AKAP4Q5JQC9 854 aa12.55□□□□□ -0.4
RAD51B-208ENST00000479335 IL17REQ8NFR9 667 aa12.55□□□□□ -0.4
RAD51B-208ENST00000479335 TSPYL4Q9UJ04 414 aa12.55□□□□□ -0.4
RAD51B-208ENST00000479335 AXIN2Q9Y2T1 843 aa12.55□□□□□ -0.4
RAD51B-208ENST00000479335 CEMIPQ8WUJ3 1361 aa12.54□□□□□ -0.4
RAD51B-208ENST00000479335 ERBB3P21860 1342 aa12.54□□□□□ -0.4
RAD51B-208ENST00000479335 COL18A1P39060 1754 aa12.54□□□□□ -0.4
RAD51B-208ENST00000479335 USHBP1Q8N6Y0 703 aa12.54□□□□□ -0.4
RAD51B-208ENST00000479335 DDX17Q92841 729 aaKnown RBP12.54□□□□□ -0.4
RAD51B-208ENST00000479335 CHMP4AQ9BY43 222 aa12.54□□□□□ -0.4
RAD51B-208ENST00000479335 RWDD1Q9H446 243 aaPredicted RBP12.54□□□□□ -0.4
RAD51B-208ENST00000479335 CRYBG1Q9Y4K1 1723 aa12.54□□□□□ -0.4
RAD51B-208ENST00000479335 RGPD2P0DJD1 1756 aa12.53□□□□□ -0.4
RAD51B-208ENST00000479335 ELL2O00472 640 aaPredicted RBP12.53□□□□□ -0.4
RAD51B-208ENST00000479335 ZC3H6P61129 1189 aaKnown RBP12.53□□□□□ -0.4
RAD51B-208ENST00000479335 LRRC59Q96AG4 307 aaKnown RBP12.53□□□□□ -0.4
RAD51B-208ENST00000479335 LMO7Q8WWI1 1683 aa12.53□□□□□ -0.4
RAD51B-208ENST00000479335 FAM208AQ9UK61 1670 aaKnown RBP12.52□□□□□ -0.4
RAD51B-208ENST00000479335 OVOS2A0A0G2JMS6 1433 aa12.52□□□□□ -0.4
RAD51B-208ENST00000479335 TMEM57Q8N5G2 664 aa12.52□□□□□ -0.4
RAD51B-208ENST00000479335 ZBTB40Q9NUA8 1239 aa12.52□□□□□ -0.4
RAD51B-208ENST00000479335 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.52□□□□□ -0.46e-7■■□□□ 12.9
RAD51B-208ENST00000479335 PTPRCP08575 1304 aa12.52□□□□□ -0.41
RAD51B-208ENST00000479335 IGHDP01880 384 aa12.51□□□□□ -0.41
RAD51B-208ENST00000479335 ITPRIPQ8IWB1 547 aa12.51□□□□□ -0.41
RAD51B-208ENST00000479335 PCDHB15Q9Y5E8 787 aa12.51□□□□□ -0.41
RAD51B-208ENST00000479335 RGPD5Q99666 1765 aa12.51□□□□□ -0.41
RAD51B-208ENST00000479335 ABCC4O15439 1325 aa12.51□□□□□ -0.41
RAD51B-208ENST00000479335 HDAC1Q13547 482 aaPredicted RBP12.51□□□□□ -0.41
RAD51B-208ENST00000479335 RNF216Q9NWF9 866 aaPredicted RBP12.51□□□□□ -0.41
RAD51B-208ENST00000479335 C1orf141Q5JVX7 400 aa12.5□□□□□ -0.41
RAD51B-208ENST00000479335 ZNF530Q6P9A1 599 aaPredicted RBP12.5□□□□□ -0.41
RAD51B-208ENST00000479335 CACNA1FO60840 1977 aa12.5□□□□□ -0.41
RAD51B-208ENST00000479335 ZBTB7BO15156 539 aaPredicted RBP12.49□□□□□ -0.41
RAD51B-208ENST00000479335 HOXB7P09629 217 aa12.49□□□□□ -0.41
RAD51B-208ENST00000479335 INTS3Q68E01 1043 aaKnown RBP12.49□□□□□ -0.41
RAD51B-208ENST00000479335 MIS18AQ9NYP9 233 aa12.49□□□□□ -0.41
RAD51B-208ENST00000479335 NHSL1Q5SYE7 1610 aa12.48□□□□□ -0.41
RAD51B-208ENST00000479335 CCDC30Q5VVM6 783 aa12.48□□□□□ -0.41
RAD51B-208ENST00000479335 RAPGEF4Q8WZA2 1011 aa12.48□□□□□ -0.41
RAD51B-208ENST00000479335 RNMTO43148 476 aaKnown RBP12.48□□□□□ -0.41
RAD51B-208ENST00000479335 PLEKHG5O94827 1062 aa12.48□□□□□ -0.41
RAD51B-208ENST00000479335 TATP17735 454 aaPredicted RBP12.48□□□□□ -0.41
RAD51B-208ENST00000479335 TEFQ10587 303 aa12.48□□□□□ -0.41
RAD51B-208ENST00000479335 KRT24Q2M2I5 525 aa12.48□□□□□ -0.41
RAD51B-208ENST00000479335 CABLES1Q8TDN4 633 aa12.48□□□□□ -0.41
RAD51B-208ENST00000479335 STK31Q9BXU1 1019 aa12.48□□□□□ -0.41
RAD51B-208ENST00000479335 NLRP2Q9NX02 1062 aa12.48□□□□□ -0.41
RAD51B-208ENST00000479335 SPG7Q9UQ90 795 aa12.48□□□□□ -0.41
RAD51B-208ENST00000479335 SLC4A2P04920 1241 aa12.47□□□□□ -0.41
RAD51B-208ENST00000479335 LGR6Q9HBX8 967 aa12.47□□□□□ -0.41
RAD51B-208ENST00000479335 ADAMTS7Q9UKP4 1686 aa12.46□□□□□ -0.41
RAD51B-208ENST00000479335 PDE4AP27815 886 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms