RNA–Protein interactions for RNA: ENST00000479227.1

CNIH3-206, Transcript of cornichon family AMPA receptor auxiliary protein 3, humanhuman

TSL 3

Gene CNIH3, Length 525 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3-206ENST00000479227 ITGB4P16144 1822 aa12□□□□□ -0.49
CNIH3-206ENST00000479227 UBR3Q6ZT12 1888 aa12□□□□□ -0.49
CNIH3-206ENST00000479227 NLGN2Q8NFZ4 835 aa12□□□□□ -0.49
CNIH3-206ENST00000479227 CGNL1Q0VF96 1302 aa12□□□□□ -0.49
CNIH3-206ENST00000479227 ADCY9O60503 1353 aa12□□□□□ -0.49
CNIH3-206ENST00000479227 NSD3Q9BZ95 1437 aa12□□□□□ -0.49
CNIH3-206ENST00000479227 YBX3P16989 372 aaKnown RBP eCLIP11.99□□□□□ -0.49
CNIH3-206ENST00000479227 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.99□□□□□ -0.49
CNIH3-206ENST00000479227 IP6K1Q92551 441 aa11.99□□□□□ -0.49
CNIH3-206ENST00000479227 PUS7Q96PZ0 661 aaKnown RBP11.99□□□□□ -0.49
CNIH3-206ENST00000479227 TERF2IPQ9NYB0 399 aa11.99□□□□□ -0.49
CNIH3-206ENST00000479227 CCNL1Q9UK58 526 aaPredicted RBP11.99□□□□□ -0.49
CNIH3-206ENST00000479227 USP47Q96K76 1375 aa11.99□□□□□ -0.49
CNIH3-206ENST00000479227 CD163L1Q9NR16 1453 aa11.99□□□□□ -0.49
CNIH3-206ENST00000479227 DDX54Q8TDD1 881 aaKnown RBP11.98□□□□□ -0.49
CNIH3-206ENST00000479227 SYTL4Q96C24 671 aaPredicted RBP11.98□□□□□ -0.49
CNIH3-206ENST00000479227 PRIM1P49642 420 aaKnown RBP11.97□□□□□ -0.49
CNIH3-206ENST00000479227 KIF13BQ9NQT8 1826 aa11.97□□□□□ -0.49
CNIH3-206ENST00000479227 RTL1A6NKG5 1358 aa11.96□□□□□ -0.49
CNIH3-206ENST00000479227 NSD2O96028 1365 aa11.96□□□□□ -0.49
CNIH3-206ENST00000479227 MSH5O43196 834 aa11.96□□□□□ -0.49
CNIH3-206ENST00000479227 SLC24A1O60721 1099 aa11.96□□□□□ -0.49
CNIH3-206ENST00000479227 NME9Q86XW9 330 aa11.96□□□□□ -0.49
CNIH3-206ENST00000479227 ZCRB1Q8TBF4 217 aaKnown RBP11.96□□□□□ -0.49
CNIH3-206ENST00000479227 L3MBTL2Q969R5 705 aa11.96□□□□□ -0.49
CNIH3-206ENST00000479227 C4BP0C0L5 1744 aa11.96□□□□□ -0.49
CNIH3-206ENST00000479227 CICQ96RK0 1608 aaPredicted RBP11.96□□□□□ -0.5
CNIH3-206ENST00000479227 COL23A1Q86Y22 540 aaPredicted RBP11.95□□□□□ -0.5
CNIH3-206ENST00000479227 SMG6Q86US8 1419 aaKnown RBP11.94□□□□□ -0.5
CNIH3-206ENST00000479227 APLP1P51693 650 aa11.93□□□□□ -0.5
CNIH3-206ENST00000479227 TMC1Q8TDI8 760 aa11.93□□□□□ -0.5
CNIH3-206ENST00000479227 A0A1W2PP64 1363 aa11.92□□□□□ -0.5
CNIH3-206ENST00000479227 MEGF6O75095 1541 aa11.92□□□□□ -0.5
CNIH3-206ENST00000479227 PKD1L3Q7Z443 1732 aa11.92□□□□□ -0.5
CNIH3-206ENST00000479227 BRCA1P38398 1863 aaKnown RBP11.92□□□□□ -0.5
CNIH3-206ENST00000479227 COG3Q96JB2 828 aa11.92□□□□□ -0.5
CNIH3-206ENST00000479227 MAP2P11137 1827 aaKnown RBP11.92□□□□□ -0.5
CNIH3-206ENST00000479227 ARFGEF1Q9Y6D6 1849 aa11.92□□□□□ -0.5
CNIH3-206ENST00000479227 WDR90Q96KV7 1748 aa11.91□□□□□ -0.5
CNIH3-206ENST00000479227 TOGARAM1Q9Y4F4 1720 aa11.91□□□□□ -0.5
CNIH3-206ENST00000479227 PCDH11XQ9BZA7 1347 aa11.91□□□□□ -0.5
CNIH3-206ENST00000479227 PCDH11YQ9BZA8 1340 aa11.91□□□□□ -0.5
CNIH3-206ENST00000479227 HOXC9P31274 260 aa11.91□□□□□ -0.5
CNIH3-206ENST00000479227 AMPHP49418 695 aa11.91□□□□□ -0.5
CNIH3-206ENST00000479227 RAPGEF4Q8WZA2 1011 aa11.91□□□□□ -0.5
CNIH3-206ENST00000479227 SMARCC1Q92922 1105 aaPredicted RBP11.91□□□□□ -0.5
CNIH3-206ENST00000479227 KIF20BQ96Q89 1820 aa11.9□□□□□ -0.5
CNIH3-206ENST00000479227 KCNQ4P56696 695 aa11.9□□□□□ -0.5
CNIH3-206ENST00000479227 LTV1Q96GA3 475 aaPredicted RBP11.9□□□□□ -0.5
CNIH3-206ENST00000479227 KIF24Q5T7B8 1368 aa11.9□□□□□ -0.5
CNIH3-206ENST00000479227 PALLDQ8WX93 1383 aa11.9□□□□□ -0.5
CNIH3-206ENST00000479227 MAP3K19Q56UN5 1328 aa11.89□□□□□ -0.51
CNIH3-206ENST00000479227 IGSF1Q8N6C5 1336 aa11.89□□□□□ -0.51
CNIH3-206ENST00000479227 SSFA2P28290 1259 aa11.89□□□□□ -0.51
CNIH3-206ENST00000479227 MSL1Q68DK7 614 aa11.89□□□□□ -0.51
CNIH3-206ENST00000479227 AK7Q96M32 723 aa11.89□□□□□ -0.51
CNIH3-206ENST00000479227 SLC12A5Q9H2X9 1139 aa11.89□□□□□ -0.51
CNIH3-206ENST00000479227 ZNF831Q5JPB2 1677 aa11.88□□□□□ -0.51
CNIH3-206ENST00000479227 TOMM70O94826 608 aa11.88□□□□□ -0.51
CNIH3-206ENST00000479227 TATP17735 454 aaPredicted RBP11.88□□□□□ -0.51
CNIH3-206ENST00000479227 CARD11Q9BXL7 1154 aa11.88□□□□□ -0.51
CNIH3-206ENST00000479227 N4BP2Q86UW6 1770 aaPredicted RBP11.87□□□□□ -0.51
CNIH3-206ENST00000479227 KIAA1551Q9HCM1 1747 aa11.87□□□□□ -0.51
CNIH3-206ENST00000479227 KIF3CO14782 793 aa11.87□□□□□ -0.51
CNIH3-206ENST00000479227 ZNF526Q8TF50 670 aaPredicted RBP11.87□□□□□ -0.51
CNIH3-206ENST00000479227 SBF1O95248 1867 aa11.86□□□□□ -0.51
CNIH3-206ENST00000479227 TNRC6CQ9HCJ0 1690 aaKnown RBP11.85□□□□□ -0.51
CNIH3-206ENST00000479227 INSRP06213 1382 aa11.84□□□□□ -0.51
CNIH3-206ENST00000479227 PLEKHG2Q9H7P9 1386 aa11.84□□□□□ -0.51
CNIH3-206ENST00000479227 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.84□□□□□ -0.51
CNIH3-206ENST00000479227 TGFB2P61812 414 aa11.84□□□□□ -0.51
CNIH3-206ENST00000479227 NBPF6Q5VWK0 638 aa11.84□□□□□ -0.51
CNIH3-206ENST00000479227 MPRIPQ6WCQ1 1025 aa11.84□□□□□ -0.51
CNIH3-206ENST00000479227 NBPF4Q96M43 638 aa11.84□□□□□ -0.51
CNIH3-206ENST00000479227 ANKRD26Q9UPS8 1709 aa11.83□□□□□ -0.52
CNIH3-206ENST00000479227 FLT4P35916 1363 aa11.83□□□□□ -0.52
CNIH3-206ENST00000479227 RBM46Q8TBY0 533 aaKnown RBP11.83□□□□□ -0.52
CNIH3-206ENST00000479227 DNAJC5GQ8N7S2 189 aa11.82□□□□□ -0.52
CNIH3-206ENST00000479227 COL5A3P25940 1745 aaPredicted RBP11.82□□□□□ -0.52
CNIH3-206ENST00000479227 C4AP0C0L4 1744 aa11.81□□□□□ -0.52
CNIH3-206ENST00000479227 C10orf71Q711Q0 1435 aa11.81□□□□□ -0.52
CNIH3-206ENST00000479227 FSTL1Q12841 308 aa11.81□□□□□ -0.52
CNIH3-206ENST00000479227 NKX1-1Q15270 411 aaPredicted RBP11.81□□□□□ -0.52
CNIH3-206ENST00000479227 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.81□□□□□ -0.52
CNIH3-206ENST00000479227 PXDNLA1KZ92 1463 aa11.81□□□□□ -0.52
CNIH3-206ENST00000479227 NCAPD2Q15021 1401 aa11.8□□□□□ -0.52
CNIH3-206ENST00000479227 LOC102724428A0A0B4J2F2 783 aa11.8□□□□□ -0.52
CNIH3-206ENST00000479227 PHF14O94880 888 aa11.8□□□□□ -0.52
CNIH3-206ENST00000479227 SIK1P57059 783 aa11.8□□□□□ -0.52
CNIH3-206ENST00000479227 C16orf71Q8IYS4 520 aaPredicted RBP11.8□□□□□ -0.52
CNIH3-206ENST00000479227 NLGN1Q8N2Q7 840 aa11.8□□□□□ -0.52
CNIH3-206ENST00000479227 SIN3AQ96ST3 1273 aa11.8□□□□□ -0.52
CNIH3-206ENST00000479227 SPG7Q9UQ90 795 aa11.8□□□□□ -0.52
CNIH3-206ENST00000479227 MYH14Q7Z406 1995 aaKnown RBP11.79□□□□□ -0.52
CNIH3-206ENST00000479227 CCDC88AQ3V6T2 1871 aa11.79□□□□□ -0.52
CNIH3-206ENST00000479227 CYP27B1O15528 508 aa11.79□□□□□ -0.52
CNIH3-206ENST00000479227 ADRA2BP18089 450 aa11.79□□□□□ -0.52
CNIH3-206ENST00000479227 NEUROD1Q13562 356 aa11.79□□□□□ -0.52
CNIH3-206ENST00000479227 JMYQ8N9B5 988 aa11.79□□□□□ -0.52
CNIH3-206ENST00000479227 KLRG1Q96E93 195 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms