RNA–Protein interactions for RNA: ENST00000479199.1

GCA-208, Transcript of grancalcin, humanhuman

TSL 2

Gene GCA, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-208ENST00000479199 UTRNP46939 3433 aa16.92■□□□□ 0.3
GCA-208ENST00000479199 RTL1A6NKG5 1358 aa16.92■□□□□ 0.3
GCA-208ENST00000479199 ITGB4P16144 1822 aa16.92■□□□□ 0.3
GCA-208ENST00000479199 KCNQ4P56696 695 aa16.92■□□□□ 0.3
GCA-208ENST00000479199 AKT1S1Q96B36 256 aa16.92■□□□□ 0.3
GCA-208ENST00000479199 TOGARAM1Q9Y4F4 1720 aa16.92■□□□□ 0.3
GCA-208ENST00000479199 AMPHP49418 695 aa16.91■□□□□ 0.3
GCA-208ENST00000479199 SYTL4Q96C24 671 aaPredicted RBP16.91■□□□□ 0.3
GCA-208ENST00000479199 PNPLA7Q6ZV29 1317 aa16.91■□□□□ 0.3
GCA-208ENST00000479199 SLC27A3Q5K4L6 730 aa16.9■□□□□ 0.3
GCA-208ENST00000479199 ZNF784Q8NCA9 323 aaPredicted RBP16.9■□□□□ 0.3
GCA-208ENST00000479199 PRIM1P49642 420 aaKnown RBP16.89■□□□□ 0.29
GCA-208ENST00000479199 PKD1L3Q7Z443 1732 aa16.88■□□□□ 0.29
GCA-208ENST00000479199 ANKRD26Q9UPS8 1709 aa16.88■□□□□ 0.29
GCA-208ENST00000479199 RRS1Q15050 365 aaKnown RBP16.88■□□□□ 0.29
GCA-208ENST00000479199 KLHL34Q8N239 644 aa16.88■□□□□ 0.29
GCA-208ENST00000479199 USHBP1Q8N6Y0 703 aa16.88■□□□□ 0.29
GCA-208ENST00000479199 USP47Q96K76 1375 aa16.88■□□□□ 0.29
GCA-208ENST00000479199 ZCRB1Q8TBF4 217 aaKnown RBP16.87■□□□□ 0.29
GCA-208ENST00000479199 GGNBP2Q9H3C7 697 aa16.87■□□□□ 0.29
GCA-208ENST00000479199 SMG6Q86US8 1419 aaKnown RBP16.87■□□□□ 0.29
GCA-208ENST00000479199 NBPF6Q5VWK0 638 aa16.86■□□□□ 0.29
GCA-208ENST00000479199 NBPF4Q96M43 638 aa16.86■□□□□ 0.29
GCA-208ENST00000479199 SLC16A10Q8TF71 515 aa16.85■□□□□ 0.29
GCA-208ENST00000479199 TFCP2L1Q9NZI6 479 aa16.85■□□□□ 0.29
GCA-208ENST00000479199 MAP2P11137 1827 aaKnown RBP16.84■□□□□ 0.29
GCA-208ENST00000479199 FYB1O15117 783 aa16.84■□□□□ 0.29
GCA-208ENST00000479199 POLD1P28340 1107 aa16.84■□□□□ 0.29
GCA-208ENST00000479199 CCNL1Q9UK58 526 aaPredicted RBP16.84■□□□□ 0.29
GCA-208ENST00000479199 UBR3Q6ZT12 1888 aa16.84■□□□□ 0.29
GCA-208ENST00000479199 C4BP0C0L5 1744 aa16.82■□□□□ 0.28
GCA-208ENST00000479199 TMF1P82094 1093 aa16.82■□□□□ 0.28
GCA-208ENST00000479199 GPR162Q16538 588 aa16.82■□□□□ 0.28
GCA-208ENST00000479199 NLGN2Q8NFZ4 835 aa16.82■□□□□ 0.28
GCA-208ENST00000479199 INSRP06213 1382 aa16.81■□□□□ 0.28
GCA-208ENST00000479199 FLT4P35916 1363 aa16.81■□□□□ 0.28
GCA-208ENST00000479199 SLC24A1O60721 1099 aa16.81■□□□□ 0.28
GCA-208ENST00000479199 PELP1Q8IZL8 1130 aaKnown RBP16.81■□□□□ 0.28
GCA-208ENST00000479199 RAPGEF4Q8WZA2 1011 aa16.81■□□□□ 0.28
GCA-208ENST00000479199 CGNL1Q0VF96 1302 aa16.8■□□□□ 0.28
GCA-208ENST00000479199 HSP90AB2PQ58FF8 381 aa16.8■□□□□ 0.28
GCA-208ENST00000479199 GOLGB1Q14789 3259 aaKnown RBP16.8■□□□□ 0.28
GCA-208ENST00000479199 NSD3Q9BZ95 1437 aa16.79■□□□□ 0.28
GCA-208ENST00000479199 PCDH11XQ9BZA7 1347 aa16.79■□□□□ 0.28
GCA-208ENST00000479199 PCDH11YQ9BZA8 1340 aa16.79■□□□□ 0.28
GCA-208ENST00000479199 TATP17735 454 aaPredicted RBP16.79■□□□□ 0.28
GCA-208ENST00000479199 MSH5O43196 834 aa16.78■□□□□ 0.28
GCA-208ENST00000479199 MSL1Q68DK7 614 aa16.78■□□□□ 0.28
GCA-208ENST00000479199 COL23A1Q86Y22 540 aaPredicted RBP16.78■□□□□ 0.28
GCA-208ENST00000479199 KIF24Q5T7B8 1368 aa16.77■□□□□ 0.28
GCA-208ENST00000479199 PALLDQ8WX93 1383 aa16.77■□□□□ 0.28
GCA-208ENST00000479199 NCAPD2Q15021 1401 aa16.77■□□□□ 0.27
GCA-208ENST00000479199 EMILIN1Q9Y6C2 1016 aa16.76■□□□□ 0.27
GCA-208ENST00000479199 CYP27B1O15528 508 aa16.75■□□□□ 0.27
GCA-208ENST00000479199 CARD14Q9BXL6 1004 aa16.75■□□□□ 0.27
GCA-208ENST00000479199 YBX3P16989 372 aaKnown RBP eCLIP16.74■□□□□ 0.27
GCA-208ENST00000479199 MPRIPQ6WCQ1 1025 aa16.74■□□□□ 0.27
GCA-208ENST00000479199 SENP3-EIF4A1A0A087X0R7 540 aa16.73■□□□□ 0.27
GCA-208ENST00000479199 C1QTNF8P60827 252 aa16.73■□□□□ 0.27
GCA-208ENST00000479199 CDCA8Q53HL2 280 aa16.73■□□□□ 0.27
GCA-208ENST00000479199 AMIGO3Q86WK7 504 aa16.71■□□□□ 0.27
GCA-208ENST00000479199 PPM1GO15355 546 aaPredicted RBP16.7■□□□□ 0.26
GCA-208ENST00000479199 GIGYF1O75420 1035 aaPredicted RBP16.69■□□□□ 0.26
GCA-208ENST00000479199 PHF14O94880 888 aa16.68■□□□□ 0.26
GCA-208ENST00000479199 SMIM5Q71RC9 77 aa16.68■□□□□ 0.26
GCA-208ENST00000479199 PIGBQ92521 554 aa16.68■□□□□ 0.26
GCA-208ENST00000479199 AK7Q96M32 723 aa16.68■□□□□ 0.26
GCA-208ENST00000479199 COL5A3P25940 1745 aaPredicted RBP16.67■□□□□ 0.26
GCA-208ENST00000479199 FLAD1Q8NFF5 587 aa16.67■□□□□ 0.26
GCA-208ENST00000479199 SMARCC1Q92922 1105 aaPredicted RBP16.67■□□□□ 0.26
GCA-208ENST00000479199 KIF13BQ9NQT8 1826 aa16.67■□□□□ 0.26
GCA-208ENST00000479199 KIAA1551Q9HCM1 1747 aa16.67■□□□□ 0.26
GCA-208ENST00000479199 GRIN3BO60391 1043 aa16.66■□□□□ 0.26
GCA-208ENST00000479199 TRIM26Q12899 539 aaPredicted RBP16.66■□□□□ 0.26
GCA-208ENST00000479199 EYA1Q99502 592 aa16.66■□□□□ 0.26
GCA-208ENST00000479199 ATP10DQ9P241 1426 aa16.66■□□□□ 0.26
GCA-208ENST00000479199 WASHC2AQ641Q2 1341 aa16.66■□□□□ 0.26
GCA-208ENST00000479199 N4BP2Q86UW6 1770 aaPredicted RBP16.65■□□□□ 0.26
GCA-208ENST00000479199 NKX1-1Q15270 411 aaPredicted RBP16.65■□□□□ 0.26
GCA-208ENST00000479199 LINC00116Q8NCU8 138 aa16.65■□□□□ 0.26
GCA-208ENST00000479199 SPG7Q9UQ90 795 aa16.65■□□□□ 0.26
GCA-208ENST00000479199 CD2APQ9Y5K6 639 aa16.65■□□□□ 0.26
GCA-208ENST00000479199 ZNF831Q5JPB2 1677 aa16.65■□□□□ 0.26
GCA-208ENST00000479199 C4AP0C0L4 1744 aa16.65■□□□□ 0.26
GCA-208ENST00000479199 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.64■□□□□ 0.25
GCA-208ENST00000479199 LOC102724428A0A0B4J2F2 783 aa16.63■□□□□ 0.25
GCA-208ENST00000479199 SIK1P57059 783 aa16.63■□□□□ 0.25
GCA-208ENST00000479199 TMOD3Q9NYL9 352 aa16.63■□□□□ 0.25
GCA-208ENST00000479199 POLKQ9UBT6 870 aa16.63■□□□□ 0.25
GCA-208ENST00000479199 WWC3Q9ULE0 1092 aa16.63■□□□□ 0.25
GCA-208ENST00000479199 VIRMAQ69YN4 1812 aaKnown RBP16.63■□□□□ 0.25
GCA-208ENST00000479199 MYH14Q7Z406 1995 aaKnown RBP16.62■□□□□ 0.25
GCA-208ENST00000479199 HMGB2P26583 209 aaKnown RBP16.62■□□□□ 0.25
GCA-208ENST00000479199 ITPK1Q13572 414 aa16.62■□□□□ 0.25
GCA-208ENST00000479199 POLR3GLQ9BT43 218 aa16.62■□□□□ 0.25
GCA-208ENST00000479199 ASAP1Q9ULH1 1129 aa16.62■□□□□ 0.25
GCA-208ENST00000479199 IGSF1Q8N6C5 1336 aa16.62■□□□□ 0.25
GCA-208ENST00000479199 ADCY9O60503 1353 aa16.62■□□□□ 0.25
GCA-208ENST00000479199 BRCA1P38398 1863 aaKnown RBP16.61■□□□□ 0.25
GCA-208ENST00000479199 CICQ96RK0 1608 aaPredicted RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms